Gene overview

Strategies/Algorithm: overlap Ensembl ID:
Gene: SCARNA27 Gene type:
Strand: External links:
Genomic region: :- Genome Browser:

Super-enhancer search result of gene-based

SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_156900354 chr6:8047005-8086576 Sample_02_1569 Endothelial Endothelial cells 354 6 1106 127 2 63 349 EEF1E1-BLOC1S5,EEF1E1,SCARNA27,BLOC1S5,BLOC1S5-TXNDC5
SE_02_094900618 chr6:8047699-8090634 Sample_02_0949 Umbilical artery HUAEC_WT 618 13 1223 140 2 64 384 EEF1E1-BLOC1S5,EEF1E1,SCARNA27,BLOC1S5,BLOC1S5-TXNDC5
SE_02_098900496 chr6:8058469-8100722 Sample_02_0989 Kidney kidney cortex_WT 496 15 1169 138 2 70 384 EEF1E1-BLOC1S5,EEF1E1,SCARNA27,BLOC1S5,BLOC1S5-TXNDC5
SE_02_048100836 chr6:8064521-8110029 Sample_02_0481 Mammary gland MDA-MB231 836 7 1280 152 4 77 366 EEF1E1-BLOC1S5,EEF1E1,SCARNA27,BLOC1S5-TXNDC5
SE_02_132801270 chr6:8073715-8089499 Sample_02_1328 Non-mineralized aortic valves aortic valve interstitial cells 1270 7 450 52 1 25 122 EEF1E1-BLOC1S5,EEF1E1,SCARNA27,BLOC1S5-TXNDC5
SE_02_156800612 chr6:8073957-8089227 Sample_02_1568 Heart Cardiac progenitor cells 612 3 437 52 1 25 122 EEF1E1-BLOC1S5,EEF1E1,SCARNA27,BLOC1S5-TXNDC5
SE_01_002600368 chr6:8079623-8086562 Sample_01_0026 Umbilical vein endothelial-cell-of-umbilical-vein 368 1 177 22 1 22 68 EEF1E1-MUTED,EEF1E1,SCARNA27,MUTED-TXNDC5
SE_02_045101014 chr6:8079751-8109572 Sample_02_0451 Skin in vitro transformedskin fibroblasts_tumourigenic 1014 6 836 99 4 47 275 EEF1E1-BLOC1S5,EEF1E1,SCARNA27,BLOC1S5-TXNDC5
SE_02_103300475 chr6:8083003-8103346 Sample_02_1033 Haematopoietic and lymphoid tissue bone marrow K562 475 3 584 69 2 18 251 EEF1E1-BLOC1S5,EEF1E1,SCARNA27,BLOC1S5-TXNDC5

Genomic distribution of SEs associated with SCARNA27

The strength of the tissue affected by the gene


Expression of SCARNA27