SEdb 2.0
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Gene overview

Strategies/Algorithm: overlap Ensembl ID: ENSG00000069974
Gene: RAB27A Gene type: protein_coding
Strand: - External links:
Genomic region: chr15:55202966-55319113 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_023400117 chr15:55176612-55289885 Sample_02_0234 Tonsil Th17 117 28 3447 454 8 120 986 RAB27A,RSL24D1,PIGB
SE_02_023300052 chr15:55193089-55289668 Sample_02_0233 Tonsil Th1 52 20 2971 402 8 96 713 RAB27A,RSL24D1,PIGB
SE_02_139100298 chr15:55213524-55290991 Sample_02_1391 Peripheral blood FE-PD_ALK- 298 18 2328 282 8 85 456 RAB27A,PIGB,RSL24D1,PIGBOS1
SE_02_033400111 chr15:55216751-55291602 Sample_02_0334 Haematopoietic and lymphoid tissue MOLM14_CA25_11 111 11 2213 267 8 85 456 RAB27A,PIGB,RSL24D1
SE_02_017600868 chr15:55216876-55232834 Sample_02_0176 Peripheral blood LOUCY 868 2 455 77 2 23 122 RAB27A,RSL24D1
SE_02_092800057 chr15:55217004-55293246 Sample_02_0928 Peripheral blood neutrophils_Ecoli 57 19 2241 271 8 85 456 RAB27A,PIGB,RSL24D1,PIGBOS1
SE_02_153000136 chr15:55217025-55295876 Sample_02_1530 Peripheral blood neutrophils_0BA0X 136 19 2302 276 8 85 456 RAB27A,PIGB,RSL24D1,PIGBOS1
SE_02_134100109 chr15:55217047-55291981 Sample_02_1341 Blood MV411 109 29 2211 265 8 85 456 RAB27A,PIGB,RSL24D1,PIGBOS1
SE_02_103300056 chr15:55217055-55291129 Sample_02_1033 Haematopoietic and lymphoid tissue bone marrow K562 56 16 2191 263 8 85 456 RAB27A,PIGB,RSL24D1,PIGBOS1
SE_02_014400030 chr15:55217113-55291452 Sample_02_0144 Peripheral blood MV411_DMSO 30 5 2197 264 8 85 456 RAB27A,PIGB,RSL24D1
SE_02_152900114 chr15:55217205-55293198 Sample_02_1529 Peripheral blood neutrophils_0BC75 114 18 2238 269 8 85 456 RAB27A,PIGB,RSL24D1,PIGBOS1
SE_02_022200082 chr15:55217227-55291269 Sample_02_0222 Blood DU-528 82 8 2193 262 8 85 456 RAB27A,PIGB,RSL24D1
SE_02_050100063 chr15:55217349-55286492 Sample_02_0501 Blood HL-60_CTRL 63 17 2065 245 8 79 310 RAB27A,PIGB,RSL24D1,PIGBOS1
SE_01_008500196 chr15:55217375-55291440 Sample_01_0085 Stomach stomach 196 8 2193 263 8 85 456 RAB27A,PIGB,RSL24D1
SE_02_033200174 chr15:55217566-55291268 Sample_02_0332 Haematopoietic and lymphoid tissue MOLM14_DMSO_9 174 12 2181 258 8 85 456 RAB27A,PIGB,RSL24D1
SE_02_010400034 chr15:55217734-55295895 Sample_02_0104 Blood neutrophils 34 22 2283 270 8 85 456 RAB27A,PIGB,RSL24D1
SE_00_000900065 chr15:55217737-55291273 Sample_00_0009 Blood CD8-positive-alpha-beta-T-cell 65 13 2176 258 8 85 456 RAB27A,PIGB,RSL24D1
SE_02_153100052 chr15:55217749-55293145 Sample_02_1531 Peripheral blood neutrophils_0B9ZK 52 23 2217 263 8 85 456 RAB27A,PIGB,RSL24D1,PIGBOS1
SE_02_025600084 chr15:55217783-55291136 Sample_02_0256 Peripheral blood MV411 84 14 2170 258 8 85 456 RAB27A,PIGB,RSL24D1
SE_01_002400138 chr15:55217789-55291063 Sample_01_0024 Blood CD14-positive-monocyte 138 12 2170 258 8 85 456 RAB27A,PIGB,RSL24D1
SE_04_000101207 chr15:55217845-55251592 Sample_04_0001 Blood heat shocked K562 1207 7 954 130 4 48 209 RAB27A,RSL24D1
SE_02_151300841 chr15:55217908-55231014 Sample_02_1513 Lung Transitional AT2->1 cells 841 4 379 65 2 23 122 RAB27A,RSL24D1
SE_02_129700467 chr15:55217924-55258396 Sample_02_1297 Lung lung 467 21 1188 147 4 48 209 RAB27A,RSL24D1
SE_02_129900259 chr15:55217971-55287814 Sample_02_1299 Liver liver 259 37 2069 244 8 79 310 RAB27A,PIGB,RSL24D1,PIGBOS1
SE_02_083300086 chr15:55218000-55287601 Sample_02_0833 Bone marrow TEX-HIST1H3F-K27I-2-Rx_cells 86 21 2064 243 8 79 310 RAB27A,PIGB,RSL24D1,PIGBOS1
SE_02_076200794 chr15:55218046-55291005 Sample_02_0762 Podocyte podocyte_CTL 794 11 2156 257 8 85 456 RAB27A,PIGB,RSL24D1,PIGBOS1
SE_02_078400490 chr15:55218078-55284815 Sample_02_0784 Blood OSU-CLL 490 13 1991 235 8 77 310 RAB27A,PIGB,RSL24D1,PIGBOS1
SE_02_083500267 chr15:55218092-55287641 Sample_02_0835 Bone marrow TEX-HIST1H3H-K27M-Rx_cells 267 22 2061 242 8 79 310 RAB27A,PIGB,RSL24D1,PIGBOS1
SE_04_000200313 chr15:55218100-55291248 Sample_04_0002 Blood cold shocked K562 313 13 2159 257 8 85 456 RAB27A,PIGB,RSL24D1,PIGBOS1
SE_02_143100423 chr15:55218104-55284926 Sample_02_1431 Blood T cell 423 9 1992 235 8 77 310 RAB27A,PIGB,RSL24D1,PIGBOS1
SE_02_062200049 chr15:55218124-55290474 Sample_02_0622 Blood EOL1_Naive 49 33 2143 256 8 84 456 RAB27A,PIGB,RSL24D1,PIGBOS1
SE_02_002400160 chr15:55218167-55286926 Sample_02_0024 Blood CD56+ Natural Killer cells donor A 160 27 2040 241 8 79 310 RAB27A,PIGB,RSL24D1
SE_02_092600026 chr15:55218176-55286692 Sample_02_0926 Blood NB4_1 26 51 2036 241 8 79 310 RAB27A,PIGB,RSL24D1,PIGBOS1
SE_02_113000348 chr15:55218192-55258595 Sample_02_1130 Haematopoietic and lymphoid tissue bone marrow K562_??Np63?? expressing 348 17 1185 147 4 48 209 RAB27A,RSL24D1
SE_02_129600485 chr15:55218563-55258349 Sample_02_1296 Perigastric lymph node Perigastric lymph node 485 19 1171 145 4 48 209 RAB27A,RSL24D1
SE_02_082600273 chr15:55218825-55287669 Sample_02_0826 Stomach gastric tumor 273 36 2043 240 8 79 310 RAB27A,PIGB,RSL24D1,PIGBOS1
SE_02_034300130 chr15:55218982-55286495 Sample_02_0343 Bone marrow HSPC_A0 130 17 2016 238 8 79 310 RAB27A,PIGB,RSL24D1
SE_02_103400171 chr15:55219006-55285931 Sample_02_1034 Blood AML cell 171 11 2000 236 8 79 310 RAB27A,PIGB,RSL24D1,PIGBOS1
SE_02_046000169 chr15:55219866-55287820 Sample_02_0460 Blood ME-1_I-10-49_6h 169 18 2023 236 8 79 310 RAB27A,PIGB,RSL24D1,PIGBOS1
SE_02_050200264 chr15:55220133-55285984 Sample_02_0502 Blood HL-60_PMA_16h 264 20 1976 231 8 79 310 RAB27A,PIGB,RSL24D1,PIGBOS1
SE_02_023100054 chr15:55220528-55289577 Sample_02_0231 Tonsil ILC1 54 15 2060 243 8 79 317 RAB27A,PIGB,RSL24D1
SE_02_012700581 chr15:55220595-55286842 Sample_02_0127 Blood Induced-regulatory-T-cells_CPI-703 581 14 1973 229 8 79 310 RAB27A,PIGB,RSL24D1
SE_02_012600456 chr15:55220608-55287043 Sample_02_0126 Blood Induced-regulatory-T-cells_DMSO 456 10 1980 230 8 79 310 RAB27A,PIGB,RSL24D1
SE_02_047500540 chr15:55220725-55280499 Sample_02_0475 Induced hepatocyte-like cells hepatocyte-like cells 540 12 1812 207 8 67 310 RAB27A,PIGB,RSL24D1,PIGBOS1
SE_02_023200236 chr15:55220804-55286739 Sample_02_0232 Tonsil ILC3 236 14 1966 226 8 79 310 RAB27A,PIGB,RSL24D1
SE_02_071000876 chr15:55220883-55253721 Sample_02_0710 Pancreas hN34_organoid 876 6 967 123 4 48 209 RAB27A,RSL24D1
SE_00_004200382 chr15:55220938-55291125 Sample_00_0042 Stomach stomach_30y 382 18 2083 241 8 85 456 RAB27A,PIGB,RSL24D1
SE_00_005800693 chr15:55220982-55253650 Sample_00_0058 Stomach stomach 34y 693 9 960 122 4 48 209 RAB27A,RSL24D1
SE_02_098700462 chr15:55221053-55253916 Sample_02_0987 Blood K562_Control_1 462 14 971 122 4 48 209 RAB27A,RSL24D1
SE_02_020600024 chr15:55230763-55285520 Sample_02_0206 Stomach Gastric_Primary_Sample_N 24 13 1642 173 6 54 188 RAB27A,PIGB,RSL24D1
SE_02_054500400 chr15:55231697-55254201 Sample_02_0545 Bone marrow K562 WT 400 10 658 71 2 25 87 RAB27A,RSL24D1
SE_02_054700191 chr15:55234430-55240553 Sample_02_0547 Bone marrow K562_MYO1D_Hub_KO 191 4 181 22 0 12 87 RAB27A,RSL24D1
SE_02_013200304 chr15:55236747-55291378 Sample_02_0132 Lung 1015_CL 304 10 1632 174 6 53 295 RAB27A,PIGB,RSL24D1
SE_02_013100401 chr15:55236962-55291375 Sample_02_0131 Lung 1015_PT 401 14 1623 172 6 53 295 RAB27A,PIGB,RSL24D1
SE_02_138900326 chr15:55237059-55290623 Sample_02_1389 Peripheral blood SUP-M2_ALK+ 326 15 1602 168 6 52 295 RAB27A,PIGB,RSL24D1,PIGBOS1
SE_02_099500707 chr15:55238983-55284404 Sample_02_0995 Blood MOLM-13_empty vector 707 25 1385 144 6 42 101 RAB27A,PIGB,RSL24D1,PIGBOS1
SE_01_009000387 chr15:55239327-55291371 Sample_01_0090 Lung upper-lobe-of-left-lung 387 9 1555 168 6 50 247 RAB27A,PIGB,RSL24D1
SE_02_034200183 chr15:55240163-55290911 Sample_02_0342 Liver HSPCs_F0 183 12 1522 162 6 50 247 RAB27A,PIGB,RSL24D1
SE_01_010400648 chr15:55240258-55287824 Sample_01_0104 Lung upper lobe of left lung 648 21 1432 147 6 44 101 RAB27A,PIGB,RSL24D1,PIGBOS1
SE_02_109800494 chr15:55240292-55283522 Sample_02_1098 Blood THP1_DMSO_noPMA 494 14 1334 138 6 36 101 RAB27A,PIGB,RSL24D1,PIGBOS1
SE_00_004900726 chr15:55240328-55286516 Sample_00_0049 Small intestine small intestine 30y 726 10 1402 145 6 44 101 RAB27A,PIGB,RSL24D1,PIGBOS1
SE_02_152400661 chr15:55241897-55255693 Sample_02_1524 Lung H3122 DMSO 661 4 426 40 2 6 0 RAB27A,RSL24D1
SE_01_005200513 chr15:55246262-55293615 Sample_01_0052 Blood neutrophil 513 4 1412 151 5 43 247 RAB27A,PIGB,RSL24D1
SE_02_134000323 chr15:55246479-55284794 Sample_02_1340 Blood acute myeloid leukemia 323 19 1185 118 4 33 101 RAB27A,PIGB,RSL24D1,PIGBOS1
SE_02_083400446 chr15:55246624-55287774 Sample_02_0834 Bone marrow TEX-HIST1H3F-WT-Rx_cells 446 8 1254 125 4 35 101 RAB27A,PIGB,RSL24D1,PIGBOS1
SE_02_092700569 chr15:55246731-55292890 Sample_02_0927 Peripheral blood neutrophils_US 569 21 1387 142 4 41 247 RAB27A,PIGB,RSL24D1,PIGBOS1
SE_02_157301105 chr15:55246743-55287303 Sample_02_1573 Endothelial Undifferentiated Pleomorphic Sarcoma 1105 13 1238 122 4 35 101 RAB27A,PIGB,RSL24D1,PIGBOS1
SE_02_099400797 chr15:55246792-55283579 Sample_02_0994 Blood MOLM13_SIK3TQ 797 21 1152 114 4 27 101 RAB27A,PIGB,RSL24D1,PIGBOS1
SE_02_134600234 chr15:55246796-55286542 Sample_02_1346 Leukophereses leukophereses_p400 234 13 1219 121 4 35 101 RAB27A,PIGB,RSL24D1,PIGBOS1
SE_02_134500392 chr15:55246843-55284744 Sample_02_1345 Leukophereses leukophereses_p358 392 21 1170 115 4 33 101 RAB27A,PIGB,RSL24D1,PIGBOS1
SE_02_133200083 chr15:55246969-55304221 Sample_02_1332 Blood Monomac6_CTRL 83 17 1721 195 5 41 247 RAB27A,PIGB,RSL24D1,PIGBOS1
SE_00_005500827 chr15:55246996-55283651 Sample_00_0055 Spleen spleen 34y 827 13 1148 114 4 27 101 RAB27A,PIGB,RSL24D1,PIGBOS1
SE_02_046100128 chr15:55247003-55290557 Sample_02_0461 Blood MV-4-11-B cells 128 20 1321 136 4 40 247 RAB27A,PIGB,RSL24D1,PIGBOS1
SE_02_083700163 chr15:55247032-55291044 Sample_02_0837 Bone marrow TEX-Luciferase-Rx_cells 163 14 1333 137 4 41 247 RAB27A,PIGB,RSL24D1,PIGBOS1
SE_02_134200067 chr15:55247077-55287680 Sample_02_1342 Blood NB4 67 23 1238 123 4 35 101 RAB27A,PIGB,PIGBOS1
SE_02_083600584 chr15:55247079-55286327 Sample_02_0836 Bone marrow TEX-HIST1H3H-WT-Rx_cells 584 13 1209 119 4 35 101 RAB27A,PIGB,PIGBOS1
SE_01_008401039 chr15:55247206-55287613 Sample_01_0084 Spleen spleen 1039 8 1233 122 4 35 101 RAB27A,PIGB
SE_02_033700201 chr15:55247394-55291336 Sample_02_0337 Haematopoietic and lymphoid tissue MV411_untreat 201 9 1331 139 4 41 247 RAB27A,PIGB
SE_02_033500213 chr15:55247507-55291439 Sample_02_0335 Haematopoietic and lymphoid tissue MOLM14_CA25_12 213 6 1331 139 4 41 247 RAB27A,PIGB
SE_02_034700165 chr15:55247579-55287985 Sample_02_0347 Blood AML11 165 12 1234 123 4 35 101 RAB27A,PIGB
SE_02_099300643 chr15:55247585-55283968 Sample_02_0993 Blood MOLM-13_empty 643 25 1140 115 4 28 101 RAB27A,PIGB,PIGBOS1
SE_02_033300289 chr15:55247819-55290961 Sample_02_0333 Haematopoietic and lymphoid tissue MOLM14_DMSO_10 289 8 1306 137 4 40 247 RAB27A,PIGB
SE_02_033100253 chr15:55248679-55291048 Sample_02_0331 Haematopoietic and lymphoid tissue MOLM14_untreated 253 7 1290 136 4 40 247 RAB27A,PIGB
SE_02_133100415 chr15:55248934-55284676 Sample_02_1331 Blood Molm13_CTRL 415 10 1118 114 4 32 101 RAB27A,PIGB,PIGBOS1
SE_02_093700812 chr15:55249423-55271320 Sample_02_0937 Retinal Pigmented Epithelial RPE190_Con 812 5 758 74 4 10 101 RAB27A,PIGB,PIGBOS1
SE_02_017600156 chr15:55249808-55291609 Sample_02_0176 Peripheral blood LOUCY 156 4 1270 137 4 37 247 RAB27A,PIGB
SE_01_004400265 chr15:55249904-55290984 Sample_01_0044 Haematopoietic and lymphoid tissue Loucy 265 6 1252 134 4 37 247 RAB27A,PIGB
SE_00_004400240 chr15:55250080-55291242 Sample_00_0044 Cord blood T-cell 240 8 1254 133 4 37 247 RAB27A,PIGB
SE_00_000300849 chr15:55250177-55290898 Sample_00_0003 Adrenal gland adrenal-gland_97d 849 7 1241 133 4 37 247 RAB27A,PIGB
SE_00_002700214 chr15:55250373-55291191 Sample_00_0027 Blood natural-killer-cell 214 7 1247 133 4 37 247 RAB27A,PIGB
SE_00_003900933 chr15:55250457-55291020 Sample_00_0039 Spleen spleen_3y 933 8 1243 133 4 37 247 RAB27A,PIGB
SE_02_002300230 chr15:55250473-55287419 Sample_02_0023 Blood CD8donorC 230 17 1142 118 4 31 101 RAB27A,PIGB
SE_02_002200192 chr15:55250674-55290951 Sample_02_0022 Blood CD8donorA 192 15 1235 133 4 37 247 RAB27A,PIGB
SE_02_139300221 chr15:55251370-55286605 Sample_02_1393 Lymph node anaplastic large cell lymphoma cells_ALK+#54 221 12 1096 113 4 31 101 RAB27A,PIGB,PIGBOS1
SE_02_122400571 chr15:55252065-55287658 Sample_02_1224 Bone marrow normal plasma cell 571 15 1101 110 4 31 101 RAB27A,PIGB,PIGBOS1
SE_00_000800317 chr15:55254548-55291235 Sample_00_0008 Blood CD4-positive-alpha-beta-memory-T-cell 317 5 1098 119 4 37 247 RAB27A,PIGB
SE_02_014800397 chr15:55254825-55286284 Sample_02_0148 Blood CD8_T_cells 397 5 965 101 4 31 101 RAB27A,PIGB
SE_02_045400657 chr15:55254979-55286188 Sample_02_0454 Th17 lymphocytes Th17-IL-10+ Day 0 657 7 958 100 4 31 101 RAB27A,PIGB,PIGBOS1
SE_02_045500692 chr15:55255354-55284898 Sample_02_0455 Th17 lymphocytes Th17-IL-10+ Day 5 692 6 911 96 4 29 101 RAB27A,PIGB,PIGBOS1
SE_02_045700599 chr15:55255355-55284351 Sample_02_0457 Th17 lymphocytes Th17-IL-10- Day 5 599 8 905 96 4 29 101 RAB27A,PIGB,PIGBOS1
SE_02_034600320 chr15:55266619-55283714 Sample_02_0346 Blood AML10 320 3 474 48 1 23 101 RAB27A,PIGB
SE_02_111200465 chr15:55266891-55291032 Sample_02_1112 T lymphocyte THP-6 T-ALL 465 4 653 70 1 37 247 RAB27A,PIGB,PIGBOS1
SE_02_121900266 chr15:55275054-55290615 Sample_02_1219 Bone marrow H929 266 3 415 53 0 26 146 RAB27A,PIGB,PIGBOS1
SE_02_109900949 chr15:55276385-55297688 Sample_02_1099 Haematopoietic and lymphoid tissue bone marrow K562_DMSO_noIFNG 949 11 550 66 1 27 146 RAB27A,PIGB,PIGBOS1
SE_02_054700404 chr15:55278945-55290560 Sample_02_0547 Bone marrow K562_MYO1D_Hub_KO 404 3 298 36 0 26 146 RAB27A,PIGB,PIGBOS1
Genomic distribution of SEs associated with RAB27A
Genome Browser

The strength of the tissue affected by the gene

Expression of RAB27A

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)