SEdb 2.0
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Gene overview

Strategies/Algorithm: overlap Ensembl ID: ENSG00000169228
Gene: RAB24 Gene type: protein_coding
Strand: - External links:
Genomic region: chr5:177301198-177303744 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_101700262 chr5:177152580-177308240 Sample_02_1017 Embryo H9_Mesendoderm 24h_Hydroxyurea 262 32 3937 342 33 373 3602 PRELID1,RAB24,MXD3,NSD1,RGS14,LMAN2
SE_02_122400767 chr5:177287740-177310921 Sample_02_1224 Bone marrow normal plasma cell 767 11 600 51 7 198 2569 PRELID1,RAB24,MXD3,NSD1,LMAN2,RGS14
SE_02_033700368 chr5:177290693-177309348 Sample_02_0337 Haematopoietic and lymphoid tissue MV411_untreat 368 4 471 41 6 181 2365 PRELID1,NSD1,MXD3,RAB24,LMAN2,RGS14
SE_02_010400731 chr5:177293743-177310383 Sample_02_0104 Blood neutrophils 731 2 423 38 5 179 2308 PRELID1,NSD1,MXD3,RAB24,LMAN2,RGS14
SE_02_153000503 chr5:177294403-177314562 Sample_02_1530 Peripheral blood neutrophils_0BA0X 503 1 522 47 6 184 2667 PRELID1,RAB24,MXD3,NSD1,LMAN2,RGS14
SE_02_092700263 chr5:177294586-177311931 Sample_02_0927 Peripheral blood neutrophils_US 263 1 458 36 4 172 2473 PRELID1,RAB24,MXD3,NSD1,LMAN2,RGS14
SE_01_005200290 chr5:177294637-177313480 Sample_01_0052 Blood neutrophil 290 1 492 39 5 177 2619 PRELID1,NSD1,MXD3,RAB24,LMAN2,RGS14
SE_02_134500671 chr5:177294639-177309923 Sample_02_1345 Leukophereses leukophereses_p358 671 8 395 32 4 157 2129 PRELID1,RAB24,MXD3,NSD1,LMAN2,RGS14
SE_02_152900483 chr5:177294727-177312118 Sample_02_1529 Peripheral blood neutrophils_0BC75 483 1 459 37 4 171 2517 PRELID1,RAB24,MXD3,NSD1,LMAN2,RGS14
SE_02_092800360 chr5:177294872-177310254 Sample_02_0928 Peripheral blood neutrophils_Ecoli 360 1 394 33 4 154 2100 PRELID1,RAB24,MXD3,NSD1,LMAN2,RGS14
SE_00_002001251 chr5:177294899-177326715 Sample_00_0020 Large intestine large-intestine_108d 1251 4 848 68 6 174 2587 PRELID1,NSD1,MXD3,RAB24,LMAN2,RGS14
SE_00_003601092 chr5:177295053-177326703 Sample_00_0036 Small intestine small-intestine_108days 1092 4 845 67 6 172 2560 PRELID1,NSD1,MXD3,RAB24,LMAN2,RGS14
SE_02_146000806 chr5:177295557-177310673 Sample_02_1460 Blood Mutz-3 806 5 390 33 4 147 2082 PRELID1,RAB24,MXD3,NSD1,LMAN2,RGS14
SE_00_000600914 chr5:177295589-177313432 Sample_00_0006 Blood CD14-positive-monocyte 914 5 461 38 5 162 2463 PRELID1,NSD1,MXD3,RAB24,LMAN2,RGS14
SE_02_046300172 chr5:177295604-177309158 Sample_02_0463 Blood OCI-AML3 cells 172 7 354 31 4 140 1971 PRELID1,RAB24,MXD3,NSD1,LMAN2,RGS14
SE_02_003200784 chr5:177295739-177312020 Sample_02_0032 Pancreas pancreatic-islets-M 784 4 424 35 4 157 2311 PRELID1,NSD1,MXD3,RAB24,LMAN2,RGS14
SE_02_082700502 chr5:177296226-177309427 Sample_02_0827 Stomach normal gastric 502 6 341 30 4 140 1870 PRELID1,RAB24,MXD3,NSD1,LMAN2,RGS14
SE_01_008401022 chr5:177297712-177313271 Sample_01_0084 Spleen spleen 1022 1 418 36 5 139 2168 PRELID1,NSD1,MXD3,RAB24,LMAN2,RGS14
SE_02_153100686 chr5:177297725-177311492 Sample_02_1531 Peripheral blood neutrophils_0B9ZK 686 1 377 32 4 128 1902 PRELID1,RAB24,MXD3,NSD1,LMAN2,RGS14
SE_02_139400347 chr5:177298178-177309435 Sample_02_1394 Lymph node anaplastic large cell lymphoma cells_ALK+#208 347 5 309 29 4 117 1609 PRELID1,RAB24,MXD3,NSD1,LMAN2,RGS14
SE_02_125800797 chr5:177298244-177306886 Sample_02_1258 Liver Pancreatic cancer cells derived from liver metastasis 797 1 239 23 3 112 1301 PRELID1,NSD1,RAB24,MXD3,LMAN2
SE_02_034700169 chr5:177298639-177312345 Sample_02_0347 Blood AML11 169 1 383 34 4 132 2018 PRELID1,NSD1,MXD3,RAB24,LMAN2,RGS14
SE_02_092900666 chr5:177299310-177307726 Sample_02_0929 Mid-gestation placenta trophoblast__CytT 666 5 239 21 3 112 1333 PRELID1,RAB24,MXD3,NSD1,LMAN2
SE_02_081601578 chr5:177299371-177310218 Sample_02_0816 Ovary Clear cell ovarian cancer 1578 6 298 27 3 114 1455 PRELID1,RAB24,MXD3,NSD1,LMAN2,RGS14
SE_02_064900717 chr5:177299593-177307465 Sample_02_0649 Tracheobronchial epithelial HTBE_H3N2_06h 717 2 224 19 2 110 1214 PRELID1,RAB24,MXD3,NSD1,LMAN2
SE_02_065000700 chr5:177299706-177307474 Sample_02_0650 Tracheobronchial epithelial HTBE_H3N2_12h 700 2 219 17 1 109 1208 PRELID1,RAB24,MXD3,NSD1,LMAN2
SE_02_064000782 chr5:177299738-177307469 Sample_02_0640 Mammary gland MDA-MB-436_DMSO 782 2 219 17 1 109 1201 PRELID1,RAB24,MXD3,NSD1,LMAN2
SE_02_048400727 chr5:177299747-177307784 Sample_02_0484 Bone marrow HSCe_23y_CD34+,CD38-,Lineage- 727 3 232 18 2 111 1281 PRELID1,RAB24,MXD3,NSD1,LMAN2
SE_02_064500910 chr5:177299828-177307679 Sample_02_0645 Tracheobronchial epithelial HTBE_H1N1_18h 910 2 221 18 2 110 1237 PRELID1,RAB24,MXD3,NSD1,LMAN2
SE_02_122000675 chr5:177299863-177305175 Sample_02_1220 Bone marrow JJN3 675 1 137 13 0 94 839 PRELID1,NSD1,RAB24,LMAN2,MXD3
SE_01_010101445 chr5:177300172-177304962 Sample_01_0101 Pancreas pancreas_54y 1445 1 124 12 0 92 775 PRELID1,NSD1,RAB24,LMAN2,MXD3
SE_02_138700496 chr5:177300557-177312365 Sample_02_1387 Peripheral blood Mac-1_ALK- 496 1 333 26 2 122 1748 PRELID1,RAB24,MXD3,LMAN2,RGS14
SE_02_138600285 chr5:177300578-177311905 Sample_02_1386 Peripheral blood Karpas-299_ALK+ 285 5 322 25 2 121 1621 PRELID1,RAB24,MXD3,LMAN2,RGS14
SE_02_139000273 chr5:177302766-177312358 Sample_02_1390 Peripheral blood SU-DHL-1_ALK+ 273 1 275 23 2 95 1454 PRELID1,RAB24,MXD3,LMAN2,RGS14
SE_02_138800622 chr5:177302792-177312327 Sample_02_1388 Peripheral blood JB6_ALK+ 622 1 274 23 2 95 1443 PRELID1,RAB24,MXD3,LMAN2,RGS14
Genomic distribution of SEs associated with RAB24
Genome Browser

The strength of the tissue affected by the gene

Expression of RAB24

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)