Gene overview

Strategies/Algorithm: overlap Ensembl ID: ENSG00000170848
Gene: PSG6 Gene type: protein_coding
Strand: - External links:
Genomic region: chr19:42902086-42919563 Genome Browser:

Super-enhancer search result of gene-based

SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_027400777 chr19:42871079-42915975 Sample_02_0274 Endometriosis hTERT_KD 777 9 2540 199 1 7 702 PSG1,PSG6,PSG7,PSG10,LOC100289650
SE_02_044300079 chr19:42871280-42936452 Sample_02_0443 Bone MG63 79 18 3879 324 1 9 1445 PSG1,PSG6,PSG7,LOC100289650,PSG10P
SE_02_071300083 chr19:42872757-42935085 Sample_02_0713 Pancreas BxPC3_sgTP63 83 17 3722 305 1 9 1186 PSG1,PSG6,PSG7,PSG10P
SE_02_063600113 chr19:42872809-42916083 Sample_02_0636 Skin BJ5ta 113 12 2428 191 1 7 610 PSG1,PSG6,PSG10P,PSG7
SE_02_026300243 chr19:42873017-42937097 Sample_02_0263 Osteoblastic hFOB_undifferentiated 243 11 3825 322 1 9 1387 PSG1,PSG6,PSG7,PSG10
SE_02_076000310 chr19:42873295-42915563 Sample_02_0760 Ovary BIN-67_SMARCA4 310 12 2364 182 1 7 597 PSG1,PSG6,PSG10P,PSG7
SE_02_061900336 chr19:42873429-42915350 Sample_02_0619 Head and Neck HPV+ HNSCC_SCC-047 336 15 2342 182 1 5 597 PSG1,PSG6,PSG10P,PSG7
SE_02_093800355 chr19:42873438-42915962 Sample_02_0938 Retinal Pigmented Epithelial RPE190_TnT 355 9 2384 188 1 7 597 PSG1,PSG6,PSG10P,PSG7
SE_02_158100084 chr19:42873463-42916039 Sample_02_1581 Renal OS-LM1 84 15 2391 189 1 7 607 PSG1,PSG6,PSG10P,PSG7
SE_02_005400816 chr19:42873636-42916445 Sample_02_0054 Lung IMR-90_DMSO_1 816 8 2418 192 1 7 665 PSG1,PSG6,PSG10,PSG7
SE_02_006900208 chr19:42873824-42937351 Sample_02_0069 Brain SF268 208 20 3810 320 1 9 1432 PSG1,PSG6,PSG7,PSG10
SE_02_093000710 chr19:42873884-42916127 Sample_02_0930 Mid-gestation placenta trophoblast__SynT 710 16 2376 188 1 7 623 PSG1,PSG6,PSG10P,PSG7,PSG8
SE_02_058900026 chr19:42873920-42935093 Sample_02_0589 Cervix HeLa Kyoto_Luci siRNA 26 28 3662 300 1 9 1186 PSG1,PSG6,PSG7,PSG10P
SE_02_126800521 chr19:42874344-42907759 Sample_02_1268 Bone Im-GCT-4072_G34W unedited_U3 521 5 1822 139 0 5 460 PSG1,PSG6,PSG10P,PSG7
SE_02_143500640 chr19:42874454-42914683 Sample_02_1435 Trophoblast trophoblast stem cells_MSX2_KD 640 5 2236 172 1 5 597 PSG1,PSG6,PSG10P,PSG7
SE_02_060300539 chr19:42874543-42914573 Sample_02_0603 Mammary gland MCF10A_p63shRNA_Nutlin3A 539 6 2219 171 1 5 597 PSG1,PSG6,PSG10P,PSG7
SE_02_144000066 chr19:42898085-42917825 Sample_02_1440 Cytotrophoblast Cytotrophoblast 66 5 1164 83 1 3 553 PSG6,PSG10P,PSG7,PSG1
SE_02_061000591 chr19:42912537-42921686 Sample_02_0610 Liposarcoma MLS 1765-92 591 1 659 71 0 4 193 PSG6,PSG7,PSG1
SE_02_076200464 chr19:42912853-42937720 Sample_02_0762 Podocyte podocyte_CTL 464 1 1673 152 0 4 838 PSG6,PSG7,PSG1
SE_02_112100458 chr19:42912871-42940896 Sample_02_1121 Neonatal foreskin keratinocytes_Mi2KD 458 9 1946 175 0 4 838 PSG6,PSG7,PSG1
SE_02_048000708 chr19:42913975-42941338 Sample_02_0480 Gingival epithelial HGEP 708 11 1908 174 0 4 838 PSG6,PSG7,PSG1
SE_02_045100017 chr19:42914039-42994075 Sample_02_0451 Skin in vitro transformedskin fibroblasts_tumourigenic 17 22 4302 443 2 4 838 PSG6,PSG7,PSG1,PSG11
SE_02_076300759 chr19:42914108-42936417 Sample_02_0763 Podocyte podocyte_DEX 759 2 1478 141 0 4 743 PSG6,PSG7,PSG1
SE_02_050001246 chr19:42914128-42941778 Sample_02_0500 Fetal lung IMR90_#2 1246 9 1923 175 0 4 838 PSG6,PSG7,PSG1
SE_02_127900431 chr19:42914136-42989685 Sample_02_1279 Bone Mesenchymal stem cells 431 21 4103 424 1 4 838 PSG6,PSG7,PSG1,PSG11
SE_02_059000615 chr19:42914138-42935252 Sample_02_0590 Cervix HeLa Kyoto_Luci PWWP2A siRNA 615 7 1436 130 0 4 589 PSG6,PSG7,PSG1
SE_02_136000543 chr19:42914154-42964366 Sample_02_1360 Bladder UMUC1_sonic_pSIN-puro_EV 543 14 3069 291 1 4 838 PSG6,PSG7,PSG1
SE_02_049901212 chr19:42914165-42942357 Sample_02_0499 Fetal lung IMR90 IR Senescence 1212 8 1960 181 0 4 838 PSG6,PSG7,PSG1
SE_02_132800342 chr19:42915200-42942678 Sample_02_1328 Non-mineralized aortic valves aortic valve interstitial cells 342 8 1905 174 0 4 838 PSG6,PSG7,PSG1

Genomic distribution of SEs associated with PSG6

The strength of the tissue affected by the gene


Expression of PSG6