SEdb 2.0
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Gene overview

Strategies/Algorithm: overlap Ensembl ID: ENSG00000221823
Gene: PPP3R1 Gene type: protein_coding
Strand: - External links:
Genomic region: chr2:68178857-68256237 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_149201332 chr2:68150417-68207478 Sample_02_1492 Peripheral blood CD34+ derived peripheral blood-derived mast cells 1332 14 1508 180 3 138 850 PNO1,WDR92,PPP3R1
SE_02_023400294 chr2:68152236-68251826 Sample_02_0234 Tonsil Th17 294 22 2626 279 3 174 874 WDR92,PNO1,PPP3R1
SE_02_122400610 chr2:68172063-68256171 Sample_02_1224 Bone marrow normal plasma cell 610 20 2194 229 2 139 707 PNO1,PPP3R1,WDR92
SE_02_143100399 chr2:68172372-68256357 Sample_02_1431 Blood T cell 399 22 2191 230 2 139 707 PNO1,PPP3R1,WDR92
SE_02_103400189 chr2:68173100-68256266 Sample_02_1034 Blood AML cell 189 19 2178 228 2 139 707 PNO1,PPP3R1,WDR92
SE_02_057600083 chr2:68173168-68330810 Sample_02_0576 Blood HEL_sgLKB1e2 83 57 4064 349 7 273 1638 PNO1,CNRIP1,PPP3R1,PLEK,WDR92
SE_02_122900595 chr2:68176456-68254618 Sample_02_1229 Haematopoietic and lymphoid tissue bone marrow K562_Control 595 28 2040 213 2 130 520 PPP3R1,PNO1,WDR92
SE_02_146700246 chr2:68176886-68256213 Sample_02_1467 Blood HUDEP-2_LRFKO 246 25 2080 216 2 132 520 PPP3R1,PNO1,WDR92
SE_02_082100602 chr2:68177167-68273543 Sample_02_0821 Haematopoietic and lymphoid tissue SET-2_WT_GSK-LSD1 602 19 2491 250 5 152 520 PPP3R1,PNO1,WDR92,CNRIP1
SE_02_017100898 chr2:68177873-68258000 Sample_02_0171 Lung IMR-90_proliferating 898 11 2085 216 2 132 520 PPP3R1,PNO1,WDR92
SE_02_146800136 chr2:68178261-68256117 Sample_02_1468 Blood HUDEP-2_WT 136 23 2045 214 2 132 520 PPP3R1,PNO1,WDR92
SE_02_023300301 chr2:68179711-68251791 Sample_02_0233 Tonsil Th1 301 17 1905 199 2 82 222 PPP3R1,PNO1,WDR92
SE_02_108300071 chr2:68184322-68254434 Sample_02_1083 Macula macula 71 22 1878 191 2 59 330 PPP3R1,PNO1,WDR92
SE_02_108200225 chr2:68184773-68253886 Sample_02_1082 Retina retina 225 32 1858 190 2 59 330 PPP3R1,PNO1,WDR92
SE_02_082000277 chr2:68184778-68266513 Sample_02_0820 Haematopoietic and lymphoid tissue SET-2_WT_DMSO 277 12 2155 210 3 63 330 PPP3R1,PNO1,WDR92
SE_02_030100397 chr2:68187036-68259831 Sample_02_0301 Neuroblastoma GIMEN 397 12 1933 194 2 53 290 PPP3R1,PNO1,WDR92
SE_02_023100131 chr2:68188587-68251824 Sample_02_0231 Tonsil ILC1 131 17 1711 176 2 36 44 PPP3R1,PNO1,WDR92
SE_02_151600697 chr2:68188600-68195901 Sample_02_1516 Non-transformed mammary epithelial IMEC MYC 697 3 206 26 0 0 20 PPP3R1,PNO1,WDR92
SE_02_103300500 chr2:68189389-68264280 Sample_02_1033 Haematopoietic and lymphoid tissue bone marrow K562 500 20 1991 199 2 47 233 PPP3R1,PNO1,WDR92
SE_02_143800638 chr2:68190211-68255500 Sample_02_1438 Liver LSEC 638 16 1763 184 2 44 233 PPP3R1,PNO1,WDR92
SE_02_130400689 chr2:68190804-68272913 Sample_02_1304 Lymphoma RL_lenalidomide_tazemetostat 689 34 2174 214 5 66 233 PPP3R1,PNO1,WDR92,CNRIP1
SE_02_023200229 chr2:68192104-68256605 Sample_02_0232 Tonsil ILC3 229 15 1742 176 2 46 233 PPP3R1,PNO1,WDR92
SE_02_143600592 chr2:68192735-68255266 Sample_02_1436 Liver LSEC-Ctrl 592 15 1683 172 2 44 233 PPP3R1,PNO1,WDR92
SE_02_158300730 chr2:68193231-68258884 Sample_02_1583 Fetal lung IMR90_empty_GM 730 15 1747 174 2 46 233 PPP3R1,PNO1,WDR92
SE_02_130300640 chr2:68203351-68255911 Sample_02_1303 Lymphoma RL_tazemetostat 640 21 1379 133 2 45 233 PPP3R1,PNO1,WDR92
SE_02_101701402 chr2:68207671-68253815 Sample_02_1017 Embryo H9_Mesendoderm 24h_Hydroxyurea 1402 10 1210 113 1 44 233 PPP3R1,PNO1
SE_02_011000851 chr2:68215999-68257264 Sample_02_0110 Ovaries IOE11 851 5 1079 98 1 46 233 PPP3R1
SE_00_000301318 chr2:68216256-68254174 Sample_00_0003 Adrenal gland adrenal-gland_97d 1318 5 997 89 1 42 233 PPP3R1
SE_02_010700465 chr2:68216305-68257425 Sample_02_0107 Endometrium EEC16 465 4 1073 97 1 42 233 PPP3R1
SE_02_137700579 chr2:68216464-68257239 Sample_02_1377 Pancreas Pancreatic_tumor_associated_fibroblasts_BF1_untreated 579 17 1070 97 1 42 233 PPP3R1
SE_02_137800475 chr2:68216494-68259473 Sample_02_1378 Pancreas Pancreatic_tumor_associated_fibroblasts_CAF08_untreated 475 37 1104 99 1 42 233 PPP3R1
SE_02_137400652 chr2:68216539-68257256 Sample_02_1374 Pancreas Pancreatic_tumor_associated_fibroblasts_B009B_untreated 652 12 1063 96 1 42 233 PPP3R1
SE_02_087900414 chr2:68216848-68259332 Sample_02_0879 Ovary SVOG3e cells_Dox_12h_control 414 11 1093 97 1 41 233 PPP3R1
SE_02_006500164 chr2:68216945-68257500 Sample_02_0065 Embryo KO2-Late_G1 164 7 1055 95 1 41 228 PPP3R1
SE_02_087800388 chr2:68216960-68259506 Sample_02_0878 Ovary SVOG3e cells_noDox_control 388 11 1093 97 1 41 227 PPP3R1
SE_02_106000585 chr2:68217366-68251787 Sample_02_1060 Bone TC71_SA2 KO 585 8 904 79 1 29 0 PPP3R1
SE_02_143701119 chr2:68217468-68255640 Sample_02_1437 Liver LSEC-TNF 1119 18 1004 93 1 37 209 PPP3R1
SE_02_049901172 chr2:68217472-68258922 Sample_02_0499 Fetal lung IMR90 IR Senescence 1172 10 1071 97 1 39 209 PPP3R1
SE_02_088100376 chr2:68217622-68257047 Sample_02_0881 Ovary SVOG3e cells_Dox_12h_transduced_V5-FOXL2_WT 376 13 1041 95 1 39 209 PPP3R1
SE_02_146600473 chr2:68217833-68254876 Sample_02_1466 Blood HUDEP-2_BCL11AKO 473 9 971 89 1 37 209 PPP3R1
SE_02_071900379 chr2:68218423-68254738 Sample_02_0719 Pancreas SUIT2_TP63dN_DOX 379 9 947 86 1 37 209 PPP3R1
SE_02_088000368 chr2:68218770-68257589 Sample_02_0880 Ovary SVOG3e cells_noDox_transduced_V5-FOXL2_WT 368 11 1010 90 1 39 209 PPP3R1
SE_02_084200065 chr2:68218983-68251789 Sample_02_0842 Umbilical cord blood HSPC-derived early erythroid progenitors 65 5 861 74 1 29 0 PPP3R1
SE_02_074500418 chr2:68220300-68253542 Sample_02_0745 Embryo ES derived cardiac progenitor cells_day7 418 7 878 77 1 30 209 PPP3R1
SE_02_033600138 chr2:68221420-68321856 Sample_02_0336 Haematopoietic and lymphoid tissue SET2 138 10 2572 182 6 166 1140 CNRIP1,PPP3R1,PLEK
SE_02_149201190 chr2:68222403-68256267 Sample_02_1492 Peripheral blood CD34+ derived peripheral blood-derived mast cells 1190 10 882 82 1 32 209 PPP3R1
SE_02_047400779 chr2:68222960-68258943 Sample_02_0474 Fibroblast umbilical cord Fibroblast 779 14 914 85 1 32 209 PPP3R1
SE_02_011100602 chr2:68224824-68255098 Sample_02_0111 Ovaries IOE4 602 4 769 75 1 30 209 PPP3R1
SE_02_088300838 chr2:68224992-68257609 Sample_02_0883 Ovary SVOG3e_cells_Dox_12h_transduced with V5-FOXL2 C134W 838 12 828 80 1 32 209 PPP3R1
SE_02_088201003 chr2:68225101-68255638 Sample_02_0882 Ovary SVOG3e_cells_noDox_transduced with V5-FOXL2 C134W 1003 13 781 78 1 30 209 PPP3R1
SE_02_076900904 chr2:68225116-68254983 Sample_02_0769 Ovary HEYA8 904 12 758 74 1 30 209 PPP3R1
SE_02_061700347 chr2:68225173-68256527 Sample_02_0617 HSPC FL CD34+CD38-/lowCD90+ HSPC 347 10 803 79 1 32 209 PPP3R1
SE_02_057900960 chr2:68225187-68266539 Sample_02_0579 Blood HEL_sgNeg2 960 14 1037 92 2 34 209 PPP3R1
SE_01_010700924 chr2:68225374-68254111 Sample_01_0107 Esophagus esophagus squamous epithelium 924 7 737 72 1 30 209 PPP3R1
SE_02_026300706 chr2:68226180-68259928 Sample_02_0263 Osteoblastic hFOB_undifferentiated 706 6 837 82 1 32 209 PPP3R1
SE_02_020901040 chr2:68226263-68259240 Sample_02_0209 Lung MRC-5_MRC5_1DPT 1040 8 819 81 1 32 209 PPP3R1
SE_00_003300498 chr2:68230720-68253771 Sample_00_0033 Psoas muscle psoas-muscle_3y 498 3 587 64 0 30 209 PPP3R1
SE_02_006400454 chr2:68232741-68254360 Sample_02_0064 Embryo DN-Early_G1 454 4 553 55 0 30 209 PPP3R1
SE_02_145400737 chr2:68236689-68256626 Sample_02_1454 Arter pulmonary arterial smooth muscle cells_PAH1_sialdh1a3 737 6 509 51 0 32 209 PPP3R1
SE_02_145200880 chr2:68236854-68257325 Sample_02_1452 Arter pulmonary arterial smooth muscle cells_PAH2_sictrl 880 5 520 52 0 32 209 PPP3R1
SE_02_083501229 chr2:68238637-68256239 Sample_02_0835 Bone marrow TEX-HIST1H3H-K27M-Rx_cells 1229 3 459 48 0 30 209 PPP3R1
SE_02_006700638 chr2:68238917-68255349 Sample_02_0067 Embryo AzH-G2/M 638 3 428 47 0 28 209 PPP3R1
SE_01_003701320 chr2:68249372-68254608 Sample_01_0037 Liver hepatocyte 1320 1 138 17 0 23 209 PPP3R1
SE_01_010401046 chr2:68249670-68254002 Sample_01_0104 Lung upper lobe of left lung 1046 1 124 14 0 23 209 PPP3R1
SE_01_008400948 chr2:68249692-68254314 Sample_01_0084 Spleen spleen 948 1 128 14 0 23 209 PPP3R1
SE_02_062200343 chr2:68249715-68281176 Sample_02_0622 Blood EOL1_Naive 343 10 769 60 3 62 209 PPP3R1,CNRIP1
SE_02_143000428 chr2:68249739-68254456 Sample_02_1430 Blood Kasumi-3_mock-infected 428 1 129 12 0 23 209 PPP3R1
SE_02_081601057 chr2:68249752-68254132 Sample_02_0816 Ovary Clear cell ovarian cancer 1057 1 126 12 0 23 209 PPP3R1
SE_02_145500845 chr2:68249830-68257151 Sample_02_1455 Arter pulmonary arterial smooth muscle cells_PAH2_sialdh1a3 845 3 201 20 0 24 209 PPP3R1
SE_00_003900663 chr2:68249881-68253843 Sample_00_0039 Spleen spleen_3y 663 1 119 12 0 22 209 PPP3R1
SE_00_004101225 chr2:68249975-68253766 Sample_00_0041 Stomach stomach_3y 1225 1 115 12 0 22 209 PPP3R1
SE_00_001101137 chr2:68250003-68253832 Sample_00_0011 Esophagus esophagus 1137 1 115 12 0 22 209 PPP3R1
SE_02_064900646 chr2:68250169-68254143 Sample_02_0649 Tracheobronchial epithelial HTBE_H3N2_06h 646 2 115 11 0 22 209 PPP3R1
SE_02_059300510 chr2:68250329-68253561 Sample_02_0593 Fetal spleenocytes fetal naive T cells 510 1 97 9 0 22 209 PPP3R1
SE_02_109500672 chr2:68250336-68255312 Sample_02_1095 Blood CD34 Erythroid cells_Don002 672 1 136 16 0 22 209 PPP3R1
SE_02_048500239 chr2:68250434-68253536 Sample_02_0485 Bone marrow HSCe_65y_CD34+,CD38-,Lineage- 239 1 94 9 0 22 209 PPP3R1
SE_00_004000711 chr2:68250571-68253688 Sample_00_0040 Spleen spleen_30y 711 1 91 10 0 22 209 PPP3R1
Genomic distribution of SEs associated with PPP3R1
Genome Browser

The strength of the tissue affected by the gene

Expression of PPP3R1

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)