Gene overview
| Strategies/Algorithm: | overlap | Ensembl ID: | ENSG00000105171 |
| Gene: | POP4 | Gene type: | protein_coding |
| Strand: | + | External links: |
|
| Genomic region: | chr19:29606283-29617237 | Genome Browser: |   |
Super-enhancer search result of gene-based
| SE ID | SE Region | Sample ID | Tissue type | Biosample name | SE rank | Element | Common SNP | eQTL | Risk SNP | TFBS | CRISPR Cas9 | Gene |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SE_02_104700787 | chr19:29597704-29636977 |
Sample_02_1047 | Peripheral blood | CD4+ cells_CTCL1181 | 787 | 18 | 1260 | 100 | 4 | 54 | 819 | POP4,PLEKHF1 |
| SE_02_104601881 | chr19:29601047-29636940 |
Sample_02_1046 | Peripheral blood | CD4+ cells_CTCL1145 | 1881 | 9 | 1147 | 85 | 3 | 54 | 819 | POP4,PLEKHF1 |
| SE_00_000901017 | chr19:29604708-29625650 |
Sample_00_0009 | Blood | CD8-positive-alpha-beta-T-cell | 1017 | 3 | 743 | 64 | 3 | 53 | 819 | POP4,PLEKHF1 |
| SE_02_002200631 | chr19:29605041-29624554 |
Sample_02_0022 | Blood | CD8donorA | 631 | 7 | 705 | 59 | 3 | 49 | 819 | POP4,PLEKHF1 |
| SE_02_104900040 | chr19:29608345-29724540 |
Sample_02_1049 | Peripheral blood | CD4+ cell_ROMI | 40 | 72 | 3496 | 200 | 10 | 156 | 2465 | C19ORF12,PLEKHF1,POP4 |
| SE_02_012800290 | chr19:29610157-29691148 |
Sample_02_0128 | Haematopoietic and lymphoid tissue | ALL-SIL | 290 | 15 | 2407 | 131 | 5 | 110 | 1312 | POP4,PLEKHF1,C19ORF12 |
| SE_02_103500137 | chr19:29610244-29690646 |
Sample_02_1035 | Mammary gland | HCC70_Vehicle | 137 | 39 | 2386 | 130 | 5 | 109 | 1307 | POP4,PLEKHF1,C19ORF12 |
| SE_02_103600129 | chr19:29610248-29690593 |
Sample_02_1036 | Mammary gland | HCC70_XY018 | 129 | 47 | 2386 | 130 | 5 | 109 | 1307 | POP4,PLEKHF1,C19ORF12 |
| SE_02_028400328 | chr19:29610323-29695664 |
Sample_02_0284 | Pelvis | patient 119 | 328 | 15 | 2563 | 145 | 5 | 112 | 1290 | POP4,PLEKHF1,C19ORF12 |
| SE_02_143400419 | chr19:29610885-29632354 |
Sample_02_1434 | Trophoblast | trophoblast stem cells | 419 | 5 | 701 | 52 | 3 | 37 | 545 | POP4,PLEKHF1 |
| SE_02_104300102 | chr19:29611028-29724560 |
Sample_02_1043 | Peripheral blood | Peripheral blood cells_CTCL1200 | 102 | 54 | 3386 | 191 | 10 | 146 | 2285 | C19ORF12,PLEKHF1,POP4 |
| SE_02_143500489 | chr19:29611936-29631572 |
Sample_02_1435 | Trophoblast | trophoblast stem cells_MSX2_KD | 489 | 3 | 646 | 48 | 2 | 31 | 517 | POP4,PLEKHF1 |
| SE_02_104800070 | chr19:29614120-29710830 |
Sample_02_1048 | Peripheral blood | CD4+ cell_UNTREATED | 70 | 30 | 2899 | 165 | 9 | 111 | 1756 | C19ORF12,PLEKHF1,POP4 |
Genomic distribution of SEs associated with POP4