SEdb 2.0
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Gene overview

Strategies/Algorithm: overlap Ensembl ID: ENSG00000228049
Gene: POLR2J2 Gene type: protein_coding
Strand: - External links:
Genomic region: chr7:102665368-102671629 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_155300116 chr7:102570250-102638646 Sample_02_1553 Gastrointestinal Stromal GIST-2_KIT e11 116 23 253 27 0 127 4142 RASA4B,POLR2J3,POLR2J2,RASA4,UPK3BL,SPDYE2B
SE_02_154100056 chr7:102574210-102647747 Sample_02_1541 Nasopharyngeal HNE1 56 35 261 25 0 127 4715 RASA4B,RASA4,POLR2J2,UPK3BL,SPDYE2B,POLR2J3
SE_02_111200754 chr7:102576142-102654888 Sample_02_1112 T lymphocyte THP-6 T-ALL 754 18 268 26 0 127 5153 RASA4B,RASA4,SPDYE2B,POLR2J2,UPK3BL,POLR2J3
SE_02_124400330 chr7:102581260-102640277 Sample_02_1244 Brain KCNR_ATRA 330 14 220 23 0 127 4019 RASA4B,RASA4,POLR2J2,UPK3BL,SPDYE2B,POLR2J3
SE_00_005100141 chr7:102581335-102638806 Sample_00_0051 Adrenal gland adrenal gland 30y 141 38 206 23 0 127 3769 RASA4B,RASA4,POLR2J2,UPK3BL,SPDYE2B,POLR2J3
SE_02_050600267 chr7:102582442-102646010 Sample_02_0506 Esophagus TE5_1 267 21 231 23 0 127 3964 RASA4B,RASA4,POLR2J2,UPK3BL,SPDYE2B,POLR2J3
SE_02_110300126 chr7:102582453-102640763 Sample_02_1103 Brain NB-1643 126 26 218 23 0 127 3800 RASA4B,RASA4,POLR2J2,UPK3BL,SPDYE2B,POLR2J3
SE_02_051700267 chr7:102582535-102645326 Sample_02_0517 Esophagus TE5 267 20 225 23 0 127 3939 RASA4B,RASA4,POLR2J2,UPK3BL,SPDYE2B,POLR2J3
SE_02_111100400 chr7:102582853-102646080 Sample_02_1111 Other HGrC1_SMAD2/3KO 400 26 231 23 0 126 3849 RASA4B,RASA4,POLR2J2,UPK3BL,SPDYE2B,POLR2J3
SE_02_113100149 chr7:102583065-102646669 Sample_02_1131 Pancreas T3M4 wt 149 30 231 23 0 123 3786 RASA4B,RASA4,POLR2J2,UPK3BL,SPDYE2B,POLR2J3
SE_02_116200162 chr7:102592647-102638530 Sample_02_1162 Stomach YCC11 162 26 191 20 0 106 2448 RASA4B,RASA4,POLR2J2,UPK3BL,SPDYE2B,POLR2J3
SE_02_088500391 chr7:102592892-102646050 Sample_02_0885 Blood NALM6_2 391 11 216 21 0 106 2970 RASA4B,RASA4,POLR2J2,UPK3BL,SPDYE2B,POLR2J3
SE_02_144500702 chr7:102598557-102645483 Sample_02_1445 Adipose SW872_TAZ4SA 702 8 177 16 0 61 2253 RASA4B,RASA4,POLR2J2,UPK3BL,SPDYE2B,POLR2J3
SE_02_110700107 chr7:102601826-102637666 Sample_02_1107 Brain SK-N-AS 107 12 148 13 0 56 1417 RASA4B,RASA4,POLR2J2,UPK3BL,POLR2J3
SE_02_150301083 chr7:102603492-102638433 Sample_02_1503 Brain SHEP-21N_DOX_2h_NOSPIKE 1083 14 151 14 0 55 1314 RASA4B,RASA4,POLR2J2,UPK3BL,POLR2J3
SE_02_158300394 chr7:102603740-102670099 Sample_02_1583 Fetal lung IMR90_empty_GM 394 23 245 17 0 55 3307 RASA4B,RASA4,SPDYE2B,POLR2J2,UPK3BL,POLR2J3
SE_01_011100376 chr7:102604227-102637792 Sample_01_0111 Brain SK-N-SH 376 11 144 12 0 55 1292 RASA4B,RASA4,POLR2J2,UPK3BL,POLR2J3
SE_02_075800263 chr7:102609262-102637953 Sample_02_0758 Peripheral blood REH 263 12 120 12 0 34 913 RASA4B,RASA4,POLR2J2,UPK3BL,POLR2J3
SE_02_036200125 chr7:102609879-102637963 Sample_02_0362 Haematopoietic and lymphoid tissue REH 125 7 119 12 0 30 827 RASA4,UPK3BL,POLR2J2,POLR2J3
SE_02_110900412 chr7:102610942-102648017 Sample_02_1109 Brain SK-N-FI 412 11 146 14 0 30 1600 RASA4B,RASA4,POLR2J2,UPK3BL,POLR2J3
SE_02_136000999 chr7:102627184-102646536 Sample_02_1360 Bladder UMUC1_sonic_pSIN-puro_EV 999 5 82 12 0 0 810 POLR2J2,UPK3BL,RASA4
SE_02_116000589 chr7:102627344-102648057 Sample_02_1160 Embryo H1_shLuc 589 7 87 12 0 0 1028 POLR2J2,UPK3BL,RASA4
SE_02_136101218 chr7:102629574-102646570 Sample_02_1361 Bladder UMUC1_sonic_pSIN-puro_WTUTX 1218 3 80 10 0 0 810 POLR2J2,UPK3BL,RASA4
SE_02_077501138 chr7:102633018-102636867 Sample_02_0775 Pancreas EndoC-BH1_SE 1138 1 22 4 0 0 54 POLR2J2,RASA4,UPK3BL
SE_02_088601226 chr7:102642221-102647059 Sample_02_0886 Skin foreskin_ p63KLF4 1226 1 6 0 0 0 113 POLR2J2,UPK3BL,RASA4
SE_02_103900065 chr7:102647288-102690592 Sample_02_1039 Peripheral blood CD4+ CD7- cells_CTCL1043 65 8 170 7 0 0 2355 SPDYE2B,POLR2J2,RASA4,UPK3BL
SE_02_085700847 chr7:102665782-102668851 Sample_02_0857 Glioblastoma Glioblastoma neurosphere cell_HF-3035 847 1 6 0 0 0 201 POLR2J2,RASA4,UPK3BL
SE_02_104301059 chr7:102666700-102691057 Sample_02_1043 Peripheral blood Peripheral blood cells_CTCL1200 1059 14 121 6 0 0 1192 POLR2J2,RASA4,UPK3BL
SE_02_076500300 chr7:102668108-102691147 Sample_02_0765 Prostate 22RV1-DHT-DMSO_6h 300 8 120 6 0 0 1074 POLR2J2,UPK3BL
SE_02_155301039 chr7:102668409-102695669 Sample_02_1553 Gastrointestinal Stromal GIST-2_KIT e11 1039 8 219 22 0 0 1074 POLR2J2,UPK3BL
SE_02_077501045 chr7:102670548-102675710 Sample_02_0775 Pancreas EndoC-BH1_SE 1045 1 49 2 0 0 120 POLR2J2,UPK3BL
Genomic distribution of SEs associated with POLR2J2
Genome Browser

The strength of the tissue affected by the gene

Expression of POLR2J2

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)