SEdb 2.0
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Gene overview

Strategies/Algorithm: overlap Ensembl ID: ENSG00000182836
Gene: PLCXD3 Gene type: protein_coding
Strand: - External links:
Genomic region: chr5:41306952-41510628 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_014000015 chr5:41259890-41350823 Sample_02_0140 Kidney RT242 15 14 2573 134 4 173 606 PLCXD3,C6
SE_02_106000668 chr5:41302966-41317480 Sample_02_1060 Bone TC71_SA2 KO 668 8 404 10 0 60 573 PLCXD3,C6
SE_02_148500798 chr5:41306104-41317133 Sample_02_1485 Bone SK-ES-1 798 3 306 9 0 57 573 PLCXD3,C6
SE_01_006400484 chr5:41308738-41314576 Sample_01_0064 Brain: derived from metastatic site: supra-orbital area SK-N-MC 484 1 151 5 0 49 403 PLCXD3,C6
SE_02_004700885 chr5:41315381-41380545 Sample_02_0047 Pancreatic endoderm IIDP/donor790 885 16 1842 92 5 108 0 PLCXD3,C6
SE_02_152200708 chr5:41332871-41345405 Sample_02_1522 Skin A375 RTKi 708 3 328 22 1 44 0 PLCXD3,C6
SE_02_003300757 chr5:41332943-41379696 Sample_02_0033 Pancreas pancreatic-islets-F 757 6 1314 68 5 104 0 PLCXD3,C6
SE_02_149300419 chr5:41333140-41347473 Sample_02_1493 Skin SK-MEL-5_DMSO_6h 419 6 375 26 1 45 0 PLCXD3,C6
SE_02_077600061 chr5:41338787-41452564 Sample_02_0776 Pancreas EndoC-BH1 61 23 3101 119 8 228 127 PLCXD3
SE_02_090100460 chr5:41361235-41456954 Sample_02_0901 Heart left ventricle_LV1471 460 39 2640 97 7 193 127 PLCXD3
SE_01_011100650 chr5:41362690-41387548 Sample_01_0111 Brain SK-N-SH 650 14 731 37 3 78 127 PLCXD3,C6
SE_02_091000316 chr5:41365495-41478789 Sample_02_0910 Heart left ventricle_DCM_LV1275 316 48 3160 104 7 223 127 PLCXD3
SE_02_090400325 chr5:41367665-41470057 Sample_02_0904 Heart left ventricle_DCM_LV1028 325 45 2833 89 6 202 127 PLCXD3
SE_02_088900373 chr5:41369537-41466270 Sample_02_0889 Heart left ventricle_LV1183 373 44 2673 85 6 201 127 PLCXD3
SE_02_091100298 chr5:41389194-41466173 Sample_02_0911 Heart left ventricle_DCM_LV1290 298 42 2100 62 4 132 0 PLCXD3
SE_02_089200507 chr5:41391210-41466122 Sample_02_0892 Heart left ventricle_LV1215 507 44 2048 59 4 132 0 PLCXD3
SE_02_038100461 chr5:41391605-41463166 Sample_02_0381 Heart purified cardiomyocyte WT 461 8 1951 56 4 126 0 PLCXD3
SE_02_089100440 chr5:41391752-41466114 Sample_02_0891 Heart left ventricle_LV1202 440 43 2025 58 4 132 0 PLCXD3
SE_00_005200743 chr5:41392000-41475005 Sample_00_0052 Heart left ventricle 3y 743 38 2254 65 4 145 0 PLCXD3
SE_02_089400774 chr5:41392033-41421430 Sample_02_0894 Heart left ventricle_LV1248 774 13 830 37 4 45 0 PLCXD3
SE_02_090200805 chr5:41392080-41458435 Sample_02_0902 Heart left ventricle_LV1558 805 20 1788 53 4 115 0 PLCXD3
SE_02_089800581 chr5:41392168-41466122 Sample_02_0898 Heart left ventricle_LV1356 581 37 2003 58 4 132 0 PLCXD3
SE_02_089600806 chr5:41392172-41460432 Sample_02_0896 Heart left ventricle_LV1294 806 37 1843 53 4 121 0 PLCXD3
SE_02_091300969 chr5:41392406-41466122 Sample_02_0913 Heart left ventricle_DCM_LV1304 969 36 1996 58 4 132 0 PLCXD3
SE_02_091200442 chr5:41392551-41461900 Sample_02_0912 Heart left ventricle_DCM_LV1300 442 30 1875 53 4 124 0 PLCXD3
SE_02_089300240 chr5:41392769-41465698 Sample_02_0893 Heart left ventricle_LV1226 240 31 1977 56 4 127 0 PLCXD3
SE_01_008100684 chr5:41400973-41462836 Sample_01_0081 Right atrium auricular region right-atrium-auricular-region 684 8 1627 41 4 126 0 PLCXD3
SE_02_090700705 chr5:41401035-41462075 Sample_02_0907 Heart left ventricle_DCM_LV1223 705 34 1600 41 4 124 0 PLCXD3
SE_02_003301161 chr5:41401095-41462260 Sample_02_0033 Pancreas pancreatic-islets-F 1161 12 1606 41 4 124 0 PLCXD3
SE_03_001300902 chr5:41401145-41434108 Sample_03_0013 Lung A549 902 3 843 28 4 66 0 PLCXD3
SE_00_002100354 chr5:41401171-41462343 Sample_00_0021 Lung lung_3y 354 18 1608 41 4 124 0 PLCXD3
SE_02_090500663 chr5:41401171-41466086 Sample_02_0905 Heart left ventricle_DCM_LV1033 663 29 1706 45 4 131 0 PLCXD3
SE_02_089700255 chr5:41401196-41461731 Sample_02_0897 Heart left ventricle_LV1325 255 30 1580 40 4 124 0 PLCXD3
SE_02_090300950 chr5:41401601-41466307 Sample_02_0903 Heart left ventricle_DCM_LV1009 950 27 1696 45 4 132 0 PLCXD3
SE_02_038200664 chr5:41403720-41462480 Sample_02_0382 Heart purified cardiomyocyte G296S mutants 664 6 1548 39 4 125 0 PLCXD3
SE_02_092500457 chr5:41403929-41471650 Sample_02_0925 Heart fetal heart_PCW17_12570 457 26 1790 44 4 131 0 PLCXD3
SE_02_011100819 chr5:41404056-41420126 Sample_02_0111 Ovaries IOE4 819 3 428 19 4 41 0 PLCXD3
SE_02_088800745 chr5:41404070-41466039 Sample_02_0888 Heart left ventricle_LV1160 745 26 1636 42 4 130 0 PLCXD3
SE_02_143801043 chr5:41404116-41420828 Sample_02_1438 Liver LSEC 1043 5 450 20 4 42 0 PLCXD3
SE_02_090801235 chr5:41404245-41465986 Sample_02_0908 Heart left ventricle_DCM_LV1262 1235 29 1630 42 4 129 0 PLCXD3
SE_02_075600543 chr5:41404264-41419395 Sample_02_0756 Embryo ES-derived progenitors_FG FOXA2 -/- 543 5 405 19 4 39 0 PLCXD3
SE_02_143601038 chr5:41404416-41419855 Sample_02_1436 Liver LSEC-Ctrl 1038 4 415 19 4 40 0 PLCXD3
SE_02_075300421 chr5:41404638-41416375 Sample_02_0753 Embryo ES-derived progenitors_FG type 421 8 316 15 4 32 0 PLCXD3
SE_02_004700712 chr5:41404685-41462526 Sample_02_0047 Pancreatic endoderm IIDP/donor790 712 20 1531 38 4 124 0 PLCXD3
SE_02_075200966 chr5:41405697-41414578 Sample_02_0752 Embryo ES-derived progenitors_DE_wild type 966 2 231 14 3 25 0 PLCXD3
SE_02_126301536 chr5:41407402-41420774 Sample_02_1263 Bone Im-GCT-4072_G34W unedited 1536 4 360 17 3 36 0 PLCXD3
SE_02_040100594 chr5:41407865-41429894 Sample_02_0401 Mammary gland SUM159PT-T47D 594 4 573 21 3 49 0 PLCXD3
SE_02_127500550 chr5:41408432-41419773 Sample_02_1275 Prostate PC3_Vorinostat 550 14 311 16 3 33 0 PLCXD3
SE_02_150301228 chr5:41408751-41422444 Sample_02_1503 Brain SHEP-21N_DOX_2h_NOSPIKE 1228 3 364 19 3 38 0 PLCXD3
SE_02_057201097 chr5:41409005-41418683 Sample_02_0572 Brain LN229_1_mM_glucose 1097 5 266 15 3 27 0 PLCXD3
Genomic distribution of SEs associated with PLCXD3
Genome Browser

The strength of the tissue affected by the gene

Expression of PLCXD3

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)