SEdb 2.0
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Gene overview

Strategies/Algorithm: overlap Ensembl ID: ENSG00000163218
Gene: PGLYRP4 Gene type: protein_coding
Strand: - External links:
Genomic region: chr1:153330120-153348841 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_021601252 chr1:153336084-153365134 Sample_02_0216 Skin NHEK_scramble 1252 5 918 146 3 55 988 S100A9,PGLYRP4,PGLYRP3,S100A8,S100A12
SE_02_122100392 chr1:153336965-153346497 Sample_02_1221 Bone marrow KMS11 392 2 283 44 2 24 538 PGLYRP4,S100A8,S100A9,PGLYRP3,S100A12
SE_02_082200115 chr1:153340067-153351162 Sample_02_0822 Haematopoietic and lymphoid tissue SET-2_insR_DMSO 115 3 359 86 2 28 620 PGLYRP4,S100A8,S100A9,PGLYRP3,S100A12
SE_02_082000424 chr1:153340445-153350928 Sample_02_0820 Haematopoietic and lymphoid tissue SET-2_WT_DMSO 424 2 341 82 1 27 574 PGLYRP4,S100A8,S100A9,PGLYRP3,S100A12
SE_02_082300132 chr1:153340648-153351319 Sample_02_0823 Haematopoietic and lymphoid tissue SET-2_insR_GSK-LSD1 132 2 343 84 1 23 531 PGLYRP4,S100A8,S100A9,PGLYRP3,S100A12
SE_02_003801334 chr1:153341220-153345548 Sample_02_0038 Embryo DE 1334 1 132 27 1 13 255 PGLYRP4,PGLYRP3,S100A9,S100A8,S100A12
SE_01_004200236 chr1:153341726-153346718 Sample_01_0042 Haematopoietic and lymphoid tissue KMS-11 236 1 152 30 1 11 290 PGLYRP4,PGLYRP3,S100A9,S100A8,S100A12
SE_02_009900646 chr1:153342672-153374460 Sample_02_0099 Foreskin Epidermal-Stem-Cells_shDNMT3B 646 5 1005 146 2 50 816 S100A9,PGLYRP4,S100A12,S100A7A,PGLYRP3,S100A8
SE_02_074900999 chr1:153342697-153366083 Sample_02_0749 Mammary gland HCC1599_GSI 999 3 750 122 2 45 696 S100A9,PGLYRP4,S100A8,PGLYRP3,S100A12
SE_02_129200681 chr1:153343811-153347136 Sample_02_1292 Lung JHU-LX110-SCLC PDX 681 3 109 14 1 7 186 PGLYRP4,S100A8,S100A9,PGLYRP3,S100A12
SE_02_104603309 chr1:153344375-153366097 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 3309 8 710 111 2 43 636 S100A9,PGLYRP4,S100A8,PGLYRP3,S100A12
Genomic distribution of SEs associated with PGLYRP4
Genome Browser

The strength of the tissue affected by the gene

Expression of PGLYRP4

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)