SEdb 2.0
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Gene overview

Strategies/Algorithm: overlap Ensembl ID: ENSG00000229474
Gene: PATL2 Gene type: protein_coding
Strand: - External links:
Genomic region: chr15:44665732-44711316 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_023400442 chr15:44622443-44691204 Sample_02_0234 Tonsil Th17 442 11 1706 66 2 134 1758 SPG11,PATL2,B2M,TRIM69
SE_01_008400616 chr15:44654919-44684341 Sample_01_0084 Spleen spleen 616 6 726 21 1 88 1453 SPG11,PATL2,B2M
SE_00_005500911 chr15:44659422-44667473 Sample_00_0055 Spleen spleen 34y 911 3 197 5 1 32 362 PATL2,SPG11,B2M
SE_01_002000604 chr15:44660626-44683283 Sample_01_0020 Blood B-cell 604 3 546 18 1 76 1356 SPG11,PATL2,B2M
SE_00_000900246 chr15:44660884-44683385 Sample_00_0009 Blood CD8-positive-alpha-beta-T-cell 246 5 542 18 1 76 1335 SPG11,PATL2,B2M
SE_00_004400279 chr15:44661420-44684098 Sample_00_0044 Cord blood T-cell 279 2 552 17 1 76 1335 SPG11,PATL2,B2M
SE_00_000700541 chr15:44661551-44691079 Sample_00_0007 Blood naive thymus-derived CD4-positive,alpha-beta T cell 541 4 707 27 1 76 1335 SPG11,PATL2,B2M,TRIM69
SE_02_023300404 chr15:44661586-44683553 Sample_02_0233 Tonsil Th1 404 6 533 17 1 76 1335 SPG11,PATL2,B2M
SE_00_002700238 chr15:44661595-44684751 Sample_00_0027 Blood natural-killer-cell 238 6 567 18 1 76 1335 SPG11,PATL2,B2M
SE_02_013100789 chr15:44661627-44683514 Sample_02_0131 Lung 1015_PT 789 6 531 17 1 76 1335 SPG11,PATL2,B2M
SE_00_000500436 chr15:44661630-44683366 Sample_00_0005 Blood B-cell 436 5 527 17 1 76 1335 SPG11,PATL2,B2M
SE_00_000800365 chr15:44661688-44683384 Sample_00_0008 Blood CD4-positive-alpha-beta-memory-T-cell 365 3 526 17 1 76 1335 SPG11,PATL2,B2M
SE_02_013200820 chr15:44661779-44683922 Sample_02_0132 Lung 1015_CL 820 4 540 17 1 76 1335 SPG11,PATL2,B2M
SE_02_045400580 chr15:44661835-44691742 Sample_02_0454 Th17 lymphocytes Th17-IL-10+ Day 0 580 12 723 27 1 76 1335 PATL2,SPG11,B2M,TRIM69,LOC100419583
SE_02_078300798 chr15:44662266-44684118 Sample_02_0783 Blood MEC2 798 5 535 17 1 76 1335 PATL2,SPG11,B2M,LOC100419583
SE_02_038700414 chr15:44666198-44683118 Sample_02_0387 Lymph node CD19+_B_cells_nhl_FL1-2 414 6 411 15 1 54 1137 PATL2,B2M,SPG11
SE_02_104301189 chr15:44666349-44692996 Sample_02_1043 Peripheral blood Peripheral blood cells_CTCL1200 1189 18 636 26 1 58 1127 PATL2,B2M,TRIM69,SPG11,LOC100419583
SE_02_104200546 chr15:44666375-44683939 Sample_02_1042 Peripheral blood CD4+ cells_CTCL1137 546 9 428 15 1 54 1126 PATL2,B2M,SPG11,LOC100419583
SE_02_104801853 chr15:44668836-44693022 Sample_02_1048 Peripheral blood CD4+ cell_UNTREATED 1853 10 576 24 0 47 940 PATL2,B2M,TRIM69,SPG11,LOC100419583
Genomic distribution of SEs associated with PATL2
Genome Browser

The strength of the tissue affected by the gene

Expression of PATL2

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)