SEdb 2.0
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Gene overview

Strategies/Algorithm: overlap Ensembl ID: ENSG00000166889
Gene: PATL1 Gene type: protein_coding
Strand: - External links:
Genomic region: chr11:59636716-59669037 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_149200293 chr11:59598889-59689121 Sample_02_1492 Peripheral blood CD34+ derived peripheral blood-derived mast cells 293 28 2182 118 5 329 1704 PATL1,OSBP,MIR3162,OR10V1
SE_02_098901588 chr11:59599886-59643672 Sample_02_0989 Kidney kidney cortex_WT 1588 14 1089 52 3 183 910 PATL1,OSBP,MIR3162
SE_02_087500277 chr11:59601950-59689284 Sample_02_0875 Peripheral blood Peripheral blood-derived mast cells 277 30 2079 112 5 307 1543 PATL1,OSBP,MIR3162,OR10V1
SE_02_155100046 chr11:59645687-59710574 Sample_02_1551 Gastrointestinal Stromal MaMel 46 10 1563 108 2 146 794 PATL1,OSBP,STX3,OR10V1,OR10V2P
SE_02_093700642 chr11:59654178-59670772 Sample_02_0937 Retinal Pigmented Epithelial RPE190_Con 642 4 418 21 1 105 500 PATL1,OSBP,OR10V1
SE_02_128000790 chr11:59657096-59679504 Sample_02_1280 Bone Mesenchymal stem cells_SPC_mutation_ EF1 790 8 540 33 1 78 334 PATL1,OSBP,OR10V1
SE_02_098901682 chr11:59657434-59689075 Sample_02_0989 Kidney kidney cortex_WT 1682 13 765 52 1 68 326 PATL1,OSBP,OR10V1
SE_02_092800188 chr11:59658382-59699302 Sample_02_0928 Peripheral blood neutrophils_Ecoli 188 11 951 71 1 60 262 PATL1,OSBP,OR10V1,OR10V2P
SE_02_061500387 chr11:59661174-59670517 Sample_02_0615 Liposarcoma liposarcoma cells_MLS402 387 2 238 11 1 51 174 PATL1,OSBP,OR10V1
SE_02_065000508 chr11:59666232-59670486 Sample_02_0650 Tracheobronchial epithelial HTBE_H3N2_12h 508 1 111 3 0 47 174 PATL1,OR10V1
SE_02_032600620 chr11:59666249-59676815 Sample_02_0326 Liver hepatocytes_d3 620 2 267 12 0 47 174 PATL1,OR10V1
SE_02_032700816 chr11:59666254-59676597 Sample_02_0327 Liver hepatocytes_d6 816 2 264 11 0 47 174 PATL1,OR10V1
SE_02_032500695 chr11:59666332-59676947 Sample_02_0325 Liver hepatocytes_d1 695 2 267 12 0 47 174 PATL1,OR10V1
SE_02_064501110 chr11:59666482-59670550 Sample_02_0645 Tracheobronchial epithelial HTBE_H1N1_18h 1110 1 107 3 0 47 174 PATL1,OR10V1
SE_02_064300478 chr11:59666526-59680635 Sample_02_0643 Mammary gland MDA-MB-436 478 2 333 21 0 47 174 PATL1,OR10V1
SE_02_032200687 chr11:59667051-59683401 Sample_02_0322 Colon Caco-2 687 2 377 26 0 39 145 PATL1,OR10V1
Genomic distribution of SEs associated with PATL1
Genome Browser

The strength of the tissue affected by the gene

Expression of PATL1

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)