SEdb 2.0
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Gene overview

Strategies/Algorithm: overlap Ensembl ID: ENSG00000143748
Gene: NVL Gene type: protein_coding
Strand: - External links:
Genomic region: chr1:224227334-224330189 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_012400016 chr1:224147707-224267454 Sample_02_0124 Embryo Embryonic-stem-cells_Naive 16 15 3175 340 1 114 1161 FBXO28,NVL,MIR320B2,DEGS1
SE_02_006500775 chr1:224212444-224241631 Sample_02_0065 Embryo KO2-Late_G1 775 3 804 80 0 7 194 NVL,DEGS1,MIR320B2
SE_02_116200500 chr1:224222670-224276628 Sample_02_1162 Stomach YCC11 500 14 1384 109 0 12 378 MIR320B2,NVL,LOC101927164,DEGS1,LOC101927143
SE_02_104301648 chr1:224235210-224283461 Sample_02_1043 Peripheral blood Peripheral blood cells_CTCL1200 1648 22 1209 93 0 15 274 MIR320B2,NVL,LOC101927164,LOC101927143
SE_02_041500067 chr1:224250519-224271338 Sample_02_0415 Stomach YCC22 67 8 484 38 0 7 101 NVL,MIR320B2
SE_02_058900141 chr1:224251354-224274445 Sample_02_0589 Cervix HeLa Kyoto_Luci siRNA 141 12 557 47 0 7 101 MIR320B2,NVL,LOC101927164,LOC101927143
SE_02_059000354 chr1:224251389-224273800 Sample_02_0590 Cervix HeLa Kyoto_Luci PWWP2A siRNA 354 8 539 46 0 7 101 MIR320B2,NVL,LOC101927164,LOC101927143
SE_02_058800358 chr1:224251405-224273700 Sample_02_0588 Cervix HeLa Kyoto_untreated 358 8 536 46 0 7 101 MIR320B2,NVL,LOC101927164,LOC101927143
SE_02_077800012 chr1:224251958-224334543 Sample_02_0778 Mammary gland MCF7_FASR 12 25 2047 169 2 74 971 MIR320B2,NVL,LOC101927164,CNIH4,LOC101927143
SE_02_139400151 chr1:224254145-224275638 Sample_02_1394 Lymph node anaplastic large cell lymphoma cells_ALK+#208 151 6 508 41 0 10 130 MIR320B2,NVL,LOC101927164,LOC101927143
SE_02_076400117 chr1:224259921-224334584 Sample_02_0764 Prostate LNCaP_DHT_DMSO_6h 117 23 1844 148 2 74 910 NVL,LOC101927164,MIR320B2,CNIH4,LOC101927143
SE_02_066400046 chr1:224260396-224333064 Sample_02_0664 Prostate LNCaP_DMSO 46 27 1792 141 2 74 910 NVL,LOC101927164,MIR320B2,CNIH4,LOC101927143
SE_02_016900296 chr1:224261118-224284744 Sample_02_0169 Prostate LNCaP_R1881 296 4 540 38 0 15 102 NVL,MIR320B2
SE_02_017000322 chr1:224261174-224284667 Sample_02_0170 Prostate LNCaP_R1881_DOX 322 5 535 38 0 15 102 NVL,MIR320B2
SE_02_016800137 chr1:224261349-224332305 Sample_02_0168 Prostate LNCaP 137 10 1748 138 2 74 910 NVL,CNIH4,MIR320B2
SE_02_016200057 chr1:224261436-224318657 Sample_02_0162 Prostate C4-2B_vehicle_24h 57 19 1371 106 1 70 776 NVL,CNIH4,MIR320B2
SE_02_067300380 chr1:224261514-224283895 Sample_02_0673 Prostate LNCAP_FA 380 5 522 38 0 15 102 NVL,LOC101927164,MIR320B2,LOC101927143
SE_02_139000770 chr1:224263631-224269940 Sample_02_1390 Peripheral blood SU-DHL-1_ALK+ 770 2 134 10 0 6 40 NVL,LOC101927164,MIR320B2
SE_01_002200099 chr1:224275830-224318694 Sample_01_0022 Prostate C4-2B 99 14 1037 81 1 59 705 NVL,CNIH4,MIR320B2
SE_02_040400038 chr1:224297541-224332322 Sample_02_0404 Mammary gland ZR-75-1_2 38 3 894 76 2 39 590 NVL,CNIH4,MIR320B2
SE_02_017000358 chr1:224299694-224332443 Sample_02_0170 Prostate LNCaP_R1881_DOX 358 5 839 70 1 35 590 NVL,CNIH4,MIR320B2
SE_02_016900290 chr1:224299798-224332426 Sample_02_0169 Prostate LNCaP_R1881 290 6 835 70 1 35 590 NVL,CNIH4,MIR320B2
SE_02_103500723 chr1:224300763-224377795 Sample_02_1035 Mammary gland HCC70_Vehicle 723 26 2046 179 2 75 1085 NVL,CNIH4,MIR320B2,MIR4742
SE_02_067300650 chr1:224303109-224327522 Sample_02_0673 Prostate LNCAP_FA 650 4 601 47 0 29 386 NVL,MIR320B2,CNIH4
SE_02_077502238 chr1:224325527-224353604 Sample_02_0775 Pancreas EndoC-BH1_SE 2238 9 838 71 2 4 134 NVL,CNIH4,MIR4742,WDR26
SE_02_149201425 chr1:224325845-224341454 Sample_02_1492 Peripheral blood CD34+ derived peripheral blood-derived mast cells 1425 7 418 38 1 4 134 NVL,CNIH4
SE_02_133200605 chr1:224327857-224341379 Sample_02_1332 Blood Monomac6_CTRL 605 4 369 33 1 4 109 NVL,CNIH4
Genomic distribution of SEs associated with NVL
Genome Browser

The strength of the tissue affected by the gene

Expression of NVL

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)