SEdb 2.0
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Gene overview

Strategies/Algorithm: overlap Ensembl ID: ENSG00000122224
Gene: LY9 Gene type: protein_coding
Strand: + External links:
Genomic region: chr1:160796074-160828261 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_082600294 chr1:160725509-160836503 Sample_02_0826 Stomach gastric tumor 294 29 3290 287 17 130 2303 LY9,SLAMF7,CD244,ITLN1,CD48
SE_02_014600482 chr1:160766158-160798697 Sample_02_0146 Bone marrow LP-1_SGC-CBP30 482 4 996 98 6 18 70 LY9,SLAMF7
SE_02_073600014 chr1:160766751-160800157 Sample_02_0736 Blood Pt24_leukemia cell_THZ1 14 16 1011 99 6 24 139 LY9,SLAMF7
SE_00_000500026 chr1:160767621-160799230 Sample_00_0005 Blood B-cell 26 4 963 98 6 20 70 LY9,SLAMF7
SE_01_002000121 chr1:160767667-160801240 Sample_01_0020 Blood B-cell 121 4 1006 102 7 24 143 LY9,SLAMF7
SE_02_115600358 chr1:160767698-160798841 Sample_02_1156 Peripheral blood Day6 Plasmablast CD23- memory B cell 358 8 951 97 6 18 70 LY9,SLAMF7
SE_02_038700162 chr1:160767732-160798761 Sample_02_0387 Lymph node CD19+_B_cells_nhl_FL1-2 162 10 946 97 6 18 70 LY9,SLAMF7
SE_02_115700449 chr1:160767750-160798701 Sample_02_1157 Peripheral blood Day6 Plasmablast CD23- memory B cell_G9A-Inhibited 449 12 944 97 6 18 70 LY9,SLAMF7
SE_02_104900700 chr1:160767760-160840426 Sample_02_1049 Peripheral blood CD4+ cell_ROMI 700 44 2160 229 11 88 1763 LY9,CD244,SLAMF7,ITLN1
SE_02_104301111 chr1:160767819-160839225 Sample_02_1043 Peripheral blood Peripheral blood cells_CTCL1200 1111 28 2127 226 11 88 1761 LY9,CD244,SLAMF7,ITLN1
SE_02_002500073 chr1:160767986-160799307 Sample_02_0025 Blood CD19donorA 73 7 949 97 6 20 70 LY9,SLAMF7
SE_02_121900346 chr1:160781032-160801392 Sample_02_1219 Bone marrow H929 346 2 641 73 1 11 143 LY9,SLAMF7
SE_00_002700619 chr1:160781367-160799376 Sample_00_0027 Blood natural-killer-cell 619 3 584 69 0 7 70 LY9,SLAMF7
SE_02_122300506 chr1:160781513-160801555 Sample_02_1223 Bone marrow KMS28BM 506 2 629 73 1 11 143 LY9,SLAMF7
SE_02_139300473 chr1:160781790-160799102 Sample_02_1393 Lymph node anaplastic large cell lymphoma cells_ALK+#54 473 5 563 68 0 7 70 LY9,SLAMF7
SE_02_104801351 chr1:160793558-160841346 Sample_02_1048 Peripheral blood CD4+ cell_UNTREATED 1351 11 1433 156 5 78 1817 LY9,CD244,ITLN1
SE_02_002400232 chr1:160819126-160861641 Sample_02_0024 Blood CD56+ Natural Killer cells donor A 232 27 1282 154 2 40 1073 CD244,LY9,ITLN1
SE_00_000900990 chr1:160819850-160863702 Sample_00_0009 Blood CD8-positive-alpha-beta-T-cell 990 7 1337 168 2 41 1123 CD244,LY9,ITLN1
SE_02_058000095 chr1:160823718-160914068 Sample_02_0580 Blood HEL_sgSIK3e4 95 29 2802 369 7 85 1621 LY9,CD244,ITLN1,LOC101928372,ITLN2
SE_02_057900102 chr1:160823836-160889658 Sample_02_0579 Blood HEL_sgNeg2 102 23 2070 288 5 83 1605 LY9,CD244,ITLN1,LOC101928372
SE_02_057600085 chr1:160823847-160891134 Sample_02_0576 Blood HEL_sgLKB1e2 85 22 2103 292 6 84 1604 LY9,CD244,ITLN1,LOC101928372
Genomic distribution of SEs associated with LY9
Genome Browser

The strength of the tissue affected by the gene

Expression of LY9

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)