Gene overview
| Strategies/Algorithm: | overlap | Ensembl ID: | |
| Gene: | LOC339593 | Gene type: | |
| Strand: | External links: |
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| Genomic region: | :- | Genome Browser: |   |
Super-enhancer search result of gene-based
| SE ID | SE Region | Sample ID | Tissue type | Biosample name | SE rank | Element | Common SNP | eQTL | Risk SNP | TFBS | CRISPR Cas9 | Gene |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SE_02_082500003 | chr20:11022247-11587308 |
Sample_02_0825 | Stomach | SNU484 | 3 | 139 | 16125 | 250 | 45 | 1726 | 384 | LOC339593 |
| SE_02_072300167 | chr20:11176847-11277301 |
Sample_02_0723 | Pancreas | MIAPaca2 WT | 167 | 31 | 3096 | 155 | 16 | 530 | 323 | LOC339593 |
| SE_02_075900084 | chr20:11197607-11278320 |
Sample_02_0759 | Ovary | BIN-67_Control | 84 | 20 | 2480 | 139 | 15 | 436 | 323 | LOC339593 |
| SE_02_076100166 | chr20:11198127-11277264 |
Sample_02_0761 | Ovary | BIN-67_SMARCA4.T910M | 166 | 18 | 2434 | 139 | 15 | 434 | 323 | LOC339593 |
| SE_02_097000198 | chr20:11199289-11272888 |
Sample_02_0970 | Brain | H3.3K27M_XHSJ019-X1-1-Rx_xenograft | 198 | 21 | 2257 | 136 | 15 | 426 | 281 | LOC339593 |
| SE_02_095800330 | chr20:11199436-11274760 |
Sample_02_0958 | Brain | H3.3K27M_Tumor_BT245-X0-2-Rx_xenograft | 330 | 18 | 2314 | 137 | 15 | 434 | 323 | LOC339593 |
| SE_02_076000157 | chr20:11204559-11276257 |
Sample_02_0760 | Ovary | BIN-67_SMARCA4 | 157 | 15 | 2219 | 136 | 15 | 434 | 323 | LOC339593 |
| SE_02_119300487 | chr20:11227414-11272469 |
Sample_02_1193 | Brain | GBM27 | 487 | 16 | 1379 | 118 | 10 | 290 | 281 | LOC339593 |
| SE_02_085700986 | chr20:11228520-11269051 |
Sample_02_0857 | Glioblastoma | Glioblastoma neurosphere cell_HF-3035 | 986 | 6 | 1255 | 112 | 8 | 269 | 277 | LOC339593 |
| SE_02_080800307 | chr20:11228685-11276128 |
Sample_02_0808 | Ovary | RMG1_ARID1A KO | 307 | 21 | 1473 | 115 | 9 | 298 | 323 | LOC339593 |
| SE_02_057100400 | chr20:11229707-11270539 |
Sample_02_0571 | Brain | LN229_1mM_glucose_5mM_acetate | 400 | 13 | 1257 | 109 | 7 | 269 | 281 | LOC339593 |
| SE_02_086000686 | chr20:11234386-11268303 |
Sample_02_0860 | iPSCs | SAH_SMARCB1_K364del/+ | 686 | 7 | 1055 | 92 | 6 | 232 | 197 | LOC339593 |
| SE_02_074300167 | chr20:11234452-11272368 |
Sample_02_0743 | Embryo | ES derived mesoderm_day2 | 167 | 8 | 1158 | 94 | 7 | 244 | 281 | LOC339593 |
| SE_02_049400130 | chr20:11246011-11277394 |
Sample_02_0494 | Islets | differentiated hESCs Late pancreatic progenitor cells | 130 | 7 | 971 | 64 | 7 | 204 | 323 | LOC339593 |
| SE_02_096200959 | chr20:11246930-11271206 |
Sample_02_0962 | Brain | H3.3K27M_Tumor-derived cell-line_DIPGXIIIp11_cells | 959 | 12 | 753 | 62 | 7 | 157 | 281 | LOC339593 |
| SE_02_141700353 | chr20:11247706-11268593 |
Sample_02_1417 | Brain | SF7761 | 353 | 5 | 646 | 56 | 5 | 137 | 227 | LOC339593 |
| SE_02_057000746 | chr20:11248702-11268522 |
Sample_02_0570 | Brain | LN229_10_mM_glucose | 746 | 5 | 613 | 53 | 5 | 104 | 214 | LOC339593 |
| SE_02_057200792 | chr20:11249687-11270459 |
Sample_02_0572 | Brain | LN229_1_mM_glucose | 792 | 8 | 641 | 52 | 5 | 65 | 281 | LOC339593 |
| SE_02_049500668 | chr20:11265701-11276780 |
Sample_02_0495 | Islets | differentiated hESCs Early LSD1 inhibition PP2 | 668 | 4 | 325 | 4 | 1 | 56 | 323 | LOC339593 |
Genomic distribution of SEs associated with LOC339593