SEdb 2.0
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Gene overview

Strategies/Algorithm: overlap Ensembl ID:
Gene: LOC158435 Gene type:
Strand: External links:
Genomic region: :- Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_044500213 chr9:96006257-96086060 Sample_02_0445 Lung lung metastasis from primary osteosarcoma tumor M10 213 23 2412 287 11 230 885 ERCC6L2,LOC158435,LINC00092,LOC158434
SE_02_104600929 chr9:96006314-96111746 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 929 32 3117 349 12 259 2014 ERCC6L2,LOC158435,LINC00092,LOC158434
SE_02_044600784 chr9:96007342-96085797 Sample_02_0446 Bone osteosarcoma tumor P2 784 17 2374 286 11 230 885 ERCC6L2,LOC158435,LINC00092,LOC158434
SE_01_008500609 chr9:96009160-96081176 Sample_01_0085 Stomach stomach 609 14 2168 259 9 189 885 LOC158435,NCRNA00092
SE_00_004300799 chr9:96009411-96080585 Sample_00_0043 Stomach stomach_96d 799 10 2136 253 9 188 885 LOC158435,NCRNA00092
SE_02_096600198 chr9:96012322-96071610 Sample_02_0966 Brain H3.3K27M_JN29-BS3 198 10 1770 212 8 162 869 ERCC6L2,LOC158435,LINC00092,LOC158434
SE_02_120100033 chr9:96015921-96083627 Sample_02_1201 Brain GBM37 33 18 2091 258 10 177 693 ERCC6L2,LOC158435,LINC00092,LOC158434
SE_00_004200407 chr9:96020311-96076223 Sample_00_0042 Stomach stomach_30y 407 10 1711 196 7 160 563 LOC158435,NCRNA00092
SE_01_003700546 chr9:96030557-96101875 Sample_01_0037 Liver hepatocyte 546 9 2245 260 9 215 911 LOC158435,NCRNA00092
SE_02_018300216 chr9:96047158-96068045 Sample_02_0183 Skin SKMEL2 216 6 728 75 6 61 53 LOC158435,NCRNA00092
SE_02_042300639 chr9:96047368-96066434 Sample_02_0423 Skin A375 639 8 674 69 5 52 53 LOC158435,NCRNA00092
SE_02_125100023 chr9:96047566-96183221 Sample_02_1251 Bone marrow RS4_11_AZD1775 _10h 23 59 4256 372 21 299 1338 LOC158435,LOC158434,LINC00092
SE_02_124900030 chr9:96079644-96183184 Sample_02_1249 Bone marrow RS4_11_DMSO_4h 30 53 3189 249 14 203 1285 LOC158435,LOC158434
SE_02_125200028 chr9:96081045-96183209 Sample_02_1252 Bone marrow RS4_11_DMSO_10h 28 53 3140 247 14 200 1285 LOC158435,LOC158434
SE_02_125000027 chr9:96081131-96183158 Sample_02_1250 Bone marrow RS4_11_AZD1775 _4h 27 47 3137 246 14 200 1285 LOC158435,LOC158434
SE_02_044100325 chr9:96081239-96085441 Sample_02_0441 Bone M112 325 3 150 20 2 41 0 LOC158435,LOC158434
SE_02_043900423 chr9:96082060-96085929 Sample_02_0439 Bone Hu09 423 3 141 18 1 41 0 LOC158435,LOC158434
SE_02_084100317 chr9:96082590-96169769 Sample_02_0841 Blood THP-1_untr 317 27 2707 211 8 178 1285 LOC158435,LOC158434
SE_02_118200147 chr9:96087278-96141833 Sample_02_1182 Brain GBM11 147 11 1577 143 3 121 1285 LOC158435,LOC158434
SE_02_120400539 chr9:96087437-96141314 Sample_02_1204 Brain NB2 539 10 1559 142 3 121 1285 LOC158435,LOC158434
SE_02_121300658 chr9:96087532-96141950 Sample_02_1213 Brain GBM31 658 17 1575 142 3 121 1285 LOC158435,LOC158434
SE_02_106900238 chr9:96098535-96164708 Sample_02_1069 Bone marrow Bone marrow aspirate 238 21 2020 160 5 111 965 LOC158435,LOC158434
SE_02_096600406 chr9:96099072-96141127 Sample_02_0966 Brain H3.3K27M_JN29-BS3 406 15 1238 109 3 103 913 LOC158435,LOC158434
SE_02_120300398 chr9:96099216-96187106 Sample_02_1203 Brain NB1 398 18 2709 191 14 144 885 LOC158435,LOC158434
SE_02_121200217 chr9:96099797-96141449 Sample_02_1212 Brain GBM30 217 11 1223 106 3 103 802 LOC158435,LOC158434
SE_02_118100391 chr9:96099837-96141529 Sample_02_1181 Brain GBM10 391 7 1224 106 3 103 797 LOC158435,LOC158434
SE_02_117800166 chr9:96099934-96142053 Sample_02_1178 Brain GBM07 166 8 1234 106 3 103 786 LOC158435,LOC158434
SE_02_025600595 chr9:96100037-96164994 Sample_02_0256 Peripheral blood MV411 595 10 1993 153 5 111 770 LOC158435
SE_02_133000690 chr9:96100357-96160854 Sample_02_1330 Blood AMU-AML1 690 16 1839 152 5 111 707 LOC158435,LOC158434
SE_02_120100007 chr9:96100367-96189749 Sample_02_1201 Brain GBM37 7 29 2739 192 14 153 707 LOC158435,LOC158434
SE_02_118400077 chr9:96101062-96189273 Sample_02_1184 Brain GBM13 77 38 2711 189 14 151 619 LOC158435,LOC158434
SE_02_094300003 chr9:96101127-96189634 Sample_02_0943 Brain LNZ308 3 30 2721 190 14 151 611 LOC158435,LOC158434
Genomic distribution of SEs associated with LOC158435
Genome Browser

The strength of the tissue affected by the gene

Expression of LOC158435

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)