SEdb 2.0
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Gene overview

Strategies/Algorithm: overlap Ensembl ID:
Gene: LOC101927267 Gene type:
Strand: External links:
Genomic region: :- Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_076200479 chr12:49198456-49297929 Sample_02_0762 Podocyte podocyte_CTL 479 24 2616 227 4 281 1211 TUBA1C,LOC101927267,PRPH,TROAP,DNAJC22,C1QL4,TUBA1A
SE_02_154100300 chr12:49255690-49297928 Sample_02_1541 Nasopharyngeal HNE1 300 8 1181 133 2 200 1149 TUBA1C,LOC101927267,PRPH,TROAP,DNAJC22,C1QL4
SE_02_081600628 chr12:49259584-49293376 Sample_02_0816 Ovary Clear cell ovarian cancer 628 8 964 115 2 108 478 TUBA1C,LOC101927267,TROAP,C1QL4,PRPH
SE_02_110700581 chr12:49260845-49297519 Sample_02_1107 Brain SK-N-AS 581 8 1050 124 2 183 1049 TUBA1C,LOC101927267,PRPH,TROAP,DNAJC22,C1QL4
SE_02_051600589 chr12:49263377-49298026 Sample_02_0516 Esophagus KYSE70 589 5 1001 124 2 187 1171 TUBA1C,LOC101927267,PRPH,TROAP,DNAJC22,C1QL4
SE_02_050500592 chr12:49263377-49309875 Sample_02_0505 Esophagus KYSE70_1 592 6 1305 169 2 192 1332 TUBA1C,LOC101927267,PRPH,TROAP,DNAJC22,C1QL4
SE_02_085400469 chr12:49264121-49294929 Sample_02_0854 Glioblastoma Glioblastoma neurosphere cell_HF-2354 469 3 907 113 2 112 478 TUBA1C,LOC101927267,TROAP,C1QL4,PRPH
SE_02_120000520 chr12:49264191-49294290 Sample_02_1200 Brain GBM36 520 5 889 112 2 109 478 TUBA1C,LOC101927267,TROAP,C1QL4,PRPH
SE_02_096700738 chr12:49267695-49295104 Sample_02_0967 Brain H3.3K27M_JN57 738 5 801 104 2 112 394 TUBA1C,LOC101927267,TROAP,C1QL4,PRPH
SE_02_123500098 chr12:49269390-49304354 Sample_02_1235 Brain Neuroblastoma PDX tumour cells 98 10 988 134 2 182 1176 TUBA1C,LOC101927267,PRPH,TROAP,DNAJC22,C1QL4
SE_02_110500568 chr12:49269455-49297557 Sample_02_1105 Brain NBL-S 568 4 811 105 2 174 891 TUBA1C,LOC101927267,PRPH,TROAP,DNAJC22,C1QL4
SE_02_062800091 chr12:49279099-49297484 Sample_02_0628 Brain CHP-134 91 7 514 79 2 77 566 LOC101927267,PRPH,TROAP,DNAJC22,TUBA1C,C1QL4
SE_02_110900217 chr12:49279623-49297459 Sample_02_1109 Brain SK-N-FI 217 6 496 74 2 76 563 LOC101927267,PRPH,TROAP,DNAJC22,TUBA1C,C1QL4
Genomic distribution of SEs associated with LOC101927267
Genome Browser

The strength of the tissue affected by the gene

Expression of LOC101927267

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)