SEdb 2.0
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Gene overview

Strategies/Algorithm: overlap Ensembl ID:
Gene: LOC100131564 Gene type:
Strand: External links:
Genomic region: :- Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_126701223 chr1:93312837-93349340 Sample_02_1267 Bone Im-GCT-4072_G34W 1223 6 836 111 5 32 765 DR1,LOC100131564
SE_02_126301116 chr1:93312883-93353772 Sample_02_1263 Bone Im-GCT-4072_G34W unedited 1116 10 934 119 7 34 768 DR1,LOC100131564
SE_02_047900303 chr1:93312970-93353200 Sample_02_0479 Head and neck SCC25 303 13 921 119 7 33 765 DR1,LOC100131564
SE_02_103800213 chr1:93317796-93353584 Sample_02_1038 Pharynx FaDu LPS 213 9 811 101 6 33 765 DR1,LOC100131564
SE_02_060300705 chr1:93318878-93351060 Sample_02_0603 Mammary gland MCF10A_p63shRNA_Nutlin3A 705 4 729 94 5 33 729 DR1,LOC100131564
SE_02_006300435 chr1:93321524-93354501 Sample_02_0063 Skin Keratinocytes 435 4 743 92 5 41 774 DR1,LOC100131564
SE_02_010500642 chr1:93321587-93353084 Sample_02_0105 Skin neonatal_keratinocytes 642 4 708 92 5 33 729 DR1,LOC100131564
SE_02_071300420 chr1:93321593-93353617 Sample_02_0713 Pancreas BxPC3_sgTP63 420 10 721 92 5 33 729 DR1,LOC100131564
SE_02_077001190 chr1:93321643-93353925 Sample_02_0770 Ovary OVCA429_shLuc 1190 16 729 92 5 34 753 DR1,LOC100131564
SE_02_071200569 chr1:93321750-93352237 Sample_02_0712 Pancreas BxPC3_sgNEG 569 12 682 89 4 33 729 DR1,LOC100131564
SE_02_135700705 chr1:93321892-93348659 Sample_02_1357 Other IC8-deltaEGF-L1596H_GSI_0h 705 9 601 80 3 30 729 DR1,LOC100131564
SE_01_004100734 chr1:93322434-93351345 Sample_01_0041 Skin keratinocyte 734 3 646 87 4 33 729 DR1,LOC100131564
SE_02_103700318 chr1:93322577-93353808 Sample_02_1037 Pharynx FaDu Control 318 8 704 89 5 34 733 DR1,LOC100131564
SE_02_030100983 chr1:93322634-93359791 Sample_02_0301 Neuroblastoma GIMEN 983 6 826 101 6 46 774 DR1,LOC100131564
SE_02_093001109 chr1:93322666-93352267 Sample_02_0930 Mid-gestation placenta trophoblast__SynT 1109 10 663 87 4 33 729 DR1,LOC100131564
SE_02_070800555 chr1:93322677-93353565 Sample_02_0708 Pancreas hF3 organoid 555 14 693 89 5 33 729 DR1,LOC100131564
SE_02_135900863 chr1:93322700-93349686 Sample_02_1359 Other IC8-deltaEGF-L1596H_GSI_4h 863 9 602 81 3 32 729 DR1,LOC100131564
SE_02_031700828 chr1:93323077-93354410 Sample_02_0317 Neuroblastoma GICAN 828 6 702 89 5 41 774 DR1,LOC100131564
SE_02_021000532 chr1:93323187-93354289 Sample_02_0210 Lung MRC-5_N_1DPT 532 5 695 87 4 41 774 DR1,LOC100131564
SE_02_155400966 chr1:93323260-93353814 Sample_02_1554 Gastrointestinal Stromal GIST-3_KIT e11 966 9 685 87 4 34 733 DR1,LOC100131564
SE_02_086701443 chr1:93323262-93348523 Sample_02_0867 Bone marrow Bone marrow derived hMSC_d0 1443 13 563 75 2 27 729 DR1,LOC100131564
SE_02_149201267 chr1:93323327-93354241 Sample_02_1492 Peripheral blood CD34+ derived peripheral blood-derived mast cells 1267 6 692 87 4 41 774 DR1,LOC100131564
SE_02_071100332 chr1:93323436-93362012 Sample_02_0711 Pancreas hN35_organoid 332 8 858 107 5 57 874 DR1,LOC100131564
SE_02_048101230 chr1:93323668-93353677 Sample_02_0481 Mammary gland MDA-MB231 1230 7 669 86 4 33 729 DR1,LOC100131564
SE_02_070700449 chr1:93323697-93351961 Sample_02_0707 Pancreas BxPC3 WT 449 11 626 83 3 33 729 DR1,LOC100131564
SE_02_071700749 chr1:93323719-93350005 Sample_02_0717 Pancreas HPAFII_GFP_DOX 749 8 584 80 3 32 729 DR1,LOC100131564
SE_02_071000238 chr1:93323753-93362238 Sample_02_0710 Pancreas hN34_organoid 238 7 852 106 5 60 893 DR1,LOC100131564
SE_02_076000505 chr1:93323773-93351735 Sample_02_0760 Ovary BIN-67_SMARCA4 505 5 621 83 3 33 729 DR1,LOC100131564
SE_02_072100480 chr1:93324037-93351323 Sample_02_0721 Pancreas HPAFII_TP63dN_DOX 480 7 605 82 3 33 729 DR1,LOC100131564
SE_02_151600544 chr1:93324153-93354005 Sample_02_1516 Non-transformed mammary epithelial IMEC MYC 544 7 668 85 4 37 755 DR1,LOC100131564
SE_02_088601041 chr1:93324268-93354218 Sample_02_0886 Skin foreskin_ p63KLF4 1041 9 669 85 4 41 772 DR1,LOC100131564
SE_02_049901429 chr1:93324279-93353723 Sample_02_0499 Fetal lung IMR90 IR Senescence 1429 10 656 85 4 33 729 DR1,LOC100131564
SE_02_064801344 chr1:93324292-93352479 Sample_02_0648 Tracheobronchial epithelial HTBE_H3N2_03h 1344 8 629 84 4 33 729 DR1,LOC100131564
SE_02_112100466 chr1:93324346-93352406 Sample_02_1121 Neonatal foreskin keratinocytes_Mi2KD 466 9 628 84 4 33 729 DR1,LOC100131564
SE_02_151500964 chr1:93324409-93353754 Sample_02_1515 Non-transformed mammary epithelial IMEC WT 964 4 655 85 4 34 730 DR1,LOC100131564
SE_02_081101037 chr1:93324543-93350125 Sample_02_0811 Thyroid BCPAP 1037 8 568 78 3 32 720 DR1,LOC100131564
SE_02_059000616 chr1:93324547-93348209 Sample_02_0590 Cervix HeLa Kyoto_Luci PWWP2A siRNA 616 5 528 70 2 24 720 DR1,LOC100131564
SE_02_076601275 chr1:93324626-93352605 Sample_02_0766 Ovary PEO1 1275 12 627 83 4 33 713 DR1,LOC100131564
SE_02_058800759 chr1:93324639-93349614 Sample_02_0588 Cervix HeLa Kyoto_untreated 759 7 556 76 2 32 713 DR1,LOC100131564
SE_02_122800609 chr1:93324640-93348666 Sample_02_1228 Mammary gland MDA-MB-231_2 609 6 538 72 2 30 713 DR1,LOC100131564
SE_02_064500371 chr1:93324644-93352425 Sample_02_0645 Tracheobronchial epithelial HTBE_H1N1_18h 371 5 624 83 4 33 713 DR1,LOC100131564
SE_02_113800997 chr1:93324706-93349874 Sample_02_1138 Retinal Pigmented Epithelial RPE1-prometaphase 997 4 560 75 2 32 707 DR1,LOC100131564
SE_02_148000752 chr1:93329018-93354988 Sample_02_1480 Bone MHH-ES-1 752 5 561 69 4 41 623 DR1,LOC100131564
SE_02_058000465 chr1:93336312-93360076 Sample_02_0580 Blood HEL_sgSIK3e4 465 8 511 59 4 46 623 DR1,LOC100131564
SE_02_023300623 chr1:93336363-93362352 Sample_02_0233 Tonsil Th1 623 5 563 67 4 60 749 DR1,LOC100131564
SE_02_148300289 chr1:93336381-93358394 Sample_02_1483 Bone RD-ES 289 5 473 59 4 41 623 DR1,LOC100131564
SE_02_148500776 chr1:93336387-93360038 Sample_02_1485 Bone SK-ES-1 776 6 509 59 4 46 623 DR1,LOC100131564
SE_02_084200166 chr1:93336405-93353529 Sample_02_0842 Umbilical cord blood HSPC-derived early erythroid progenitors 166 5 372 47 3 33 578 DR1,LOC100131564
SE_02_057600481 chr1:93336428-93361917 Sample_02_0576 Blood HEL_sgLKB1e2 481 10 551 67 4 57 719 DR1,LOC100131564
SE_02_134000774 chr1:93337326-93354120 Sample_02_1340 Blood acute myeloid leukemia 774 6 356 43 2 41 597 DR1,LOC100131564
SE_02_092901196 chr1:93338220-93349423 Sample_02_0929 Mid-gestation placenta trophoblast__CytT 1196 7 230 32 0 32 475 DR1,LOC100131564
SE_02_048001283 chr1:93338686-93353678 Sample_02_0480 Gingival epithelial HGEP 1283 10 310 39 2 33 426 DR1,LOC100131564
SE_02_064600438 chr1:93338772-93350107 Sample_02_0646 Tracheobronchial epithelial HTBE_H1N1_24h 438 3 226 33 1 32 413 DR1,LOC100131564
SE_02_057900438 chr1:93340893-93359664 Sample_02_0579 Blood HEL_sgNeg2 438 7 398 46 3 46 333 DR1,LOC100131564
SE_02_106000688 chr1:93344053-93358562 Sample_02_1060 Bone TC71_SA2 KO 688 5 323 38 3 41 333 DR1,LOC100131564
SE_02_085400664 chr1:93344867-93354965 Sample_02_0854 Glioblastoma Glioblastoma neurosphere cell_HF-2354 664 3 222 24 2 41 333 DR1,LOC100131564
SE_02_084001388 chr1:93344888-93354775 Sample_02_0840 Embryo hNPCs_R1159Q/+ 1388 4 221 24 2 41 333 DR1,LOC100131564
SE_02_146800830 chr1:93344911-93360656 Sample_02_1468 Blood HUDEP-2_WT 830 5 349 39 3 49 360 DR1,LOC100131564
SE_02_065000520 chr1:93344935-93350033 Sample_02_0650 Tracheobronchial epithelial HTBE_H3N2_12h 520 2 114 17 1 32 288 DR1,LOC100131564
SE_02_064900986 chr1:93344999-93352396 Sample_02_0649 Tracheobronchial epithelial HTBE_H3N2_06h 986 5 170 22 2 33 288 DR1,LOC100131564
SE_02_143000578 chr1:93345026-93353783 Sample_02_1430 Blood Kasumi-3_mock-infected 578 3 200 23 2 34 292 DR1,LOC100131564
SE_02_148100838 chr1:93345029-93359433 Sample_02_1481 Bone MIC 838 3 321 35 3 46 333 DR1,LOC100131564
SE_02_142900934 chr1:93345047-93362095 Sample_02_1429 Blood GM12878_WT 934 6 378 43 3 59 444 DR1,LOC100131564
SE_02_064400397 chr1:93345149-93349746 Sample_02_0644 Tracheobronchial epithelial HTBE_H1N1_12h 397 4 106 14 0 32 288 DR1,LOC100131564
SE_02_042000314 chr1:93345189-93364291 Sample_02_0420 Pectoralis major muscle LHCN-M2_dox_6h 314 5 416 45 3 72 476 DR1,LOC100131564
Genomic distribution of SEs associated with LOC100131564
Genome Browser

The strength of the tissue affected by the gene

Expression of LOC100131564

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)