SEdb 2.0
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Gene overview

Strategies/Algorithm: overlap Ensembl ID: ENSG00000280780
Gene: JAKMIP2-AS1 Gene type: lncRNA
Strand: + External links:
Genomic region: chr5:147559994-147662009 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_118600011 chr5:147402706-147578650 Sample_02_1186 Brain GBM15 11 42 4687 83 9 527 804 DPYSL3,JAKMIP2-AS1
SE_02_141000051 chr5:147439222-147578606 Sample_02_1410 Brain GSC6 51 32 3669 74 6 394 422 DPYSL3,JAKMIP2-AS1
SE_02_068900039 chr5:147445308-147578494 Sample_02_0689 Lung NCI-H446_no infection 39 57 3511 72 6 380 422 DPYSL3,JAKMIP2-AS1
SE_02_059400122 chr5:147476778-147579192 Sample_02_0594 iPSC-derived neural progenitors 122 21 2817 54 5 253 279 JAKMIP2-AS1,DPYSL3
SE_02_120000396 chr5:147503137-147578492 Sample_02_1200 Brain GBM36 396 15 2097 43 4 219 279 JAKMIP2-AS1,DPYSL3
SE_02_143800474 chr5:147503333-147566533 Sample_02_1438 Liver LSEC 474 16 1775 32 2 188 279 JAKMIP2-AS1,DPYSL3
SE_02_143600444 chr5:147503362-147567544 Sample_02_1436 Liver LSEC-Ctrl 444 16 1808 32 2 189 279 JAKMIP2-AS1,DPYSL3
SE_02_096300045 chr5:147503677-147579217 Sample_02_0963 Brain H3.3K27M_Tumor-derived cell-line_G477p6_cells 45 16 2103 43 4 220 279 JAKMIP2-AS1,DPYSL3
SE_02_156800235 chr5:147503687-147578789 Sample_02_1568 Heart Cardiac progenitor cells 235 15 2095 43 4 219 279 JAKMIP2-AS1,DPYSL3
SE_02_097200118 chr5:147503809-147569705 Sample_02_0972 Brain H3.3K27M-KO_BT245-D2p8-Rx_R1_cells 118 18 1868 38 3 199 279 JAKMIP2-AS1,DPYSL3
SE_02_097900379 chr5:147504045-147578558 Sample_02_0979 Brain JN14-BS1_H3.3K27M 379 21 2085 43 4 219 279 JAKMIP2-AS1,DPYSL3
SE_02_118200091 chr5:147504242-147578497 Sample_02_1182 Brain GBM11 91 16 2079 43 4 218 279 JAKMIP2-AS1,DPYSL3
SE_02_127901429 chr5:147530439-147567849 Sample_02_1279 Bone Mesenchymal stem cells 1429 7 1110 27 1 75 55 JAKMIP2-AS1,DPYSL3
SE_02_043800633 chr5:147530776-147569132 Sample_02_0438 Bone HOS 633 15 1140 28 1 75 55 JAKMIP2-AS1,DPYSL3
SE_02_118700905 chr5:147538345-147578647 Sample_02_1187 Brain GBM16 905 10 1177 31 3 78 55 JAKMIP2-AS1,DPYSL3
SE_02_079900139 chr5:147553597-147570219 Sample_02_0799 Brain MESMN1 139 8 505 9 2 51 55 JAKMIP2-AS1,DPYSL3
SE_02_080100266 chr5:147553770-147569210 Sample_02_0801 Brain 2235 266 7 478 6 1 44 55 JAKMIP2-AS1,DPYSL3
SE_02_079500478 chr5:147553781-147569198 Sample_02_0795 Brain 1953 478 11 478 6 1 43 55 JAKMIP2-AS1,DPYSL3
SE_02_101700975 chr5:147554322-147583436 Sample_02_1017 Embryo H9_Mesendoderm 24h_Hydroxyurea 975 5 856 17 4 71 55 JAKMIP2-AS1,DPYSL3
SE_02_156700140 chr5:147559320-147581092 Sample_02_1567 iPSCs CiPSC 140 12 641 15 2 57 55 JAKMIP2-AS1,DPYSL3
SE_02_157200392 chr5:147559505-147578529 Sample_02_1572 iPSCs FiPSC 392 8 547 13 2 56 55 JAKMIP2-AS1,DPYSL3
SE_02_157000364 chr5:147559531-147577503 Sample_02_1570 iPSCs EiPSC 364 9 516 13 2 53 55 JAKMIP2-AS1,DPYSL3
SE_02_117200141 chr5:147559537-147583134 Sample_02_1172 Embryo H9 WT 141 5 700 15 3 57 55 JAKMIP2-AS1,DPYSL3
SE_02_101500538 chr5:147559978-147583670 Sample_02_1015 Embryo H9_ Undifferentiated 538 8 703 16 3 57 29 JAKMIP2-AS1,DPYSL3
SE_02_101600960 chr5:147560159-147583343 Sample_02_1016 Embryo H9_Mesendoderm_24h 960 10 687 15 3 57 10 JAKMIP2-AS1
SE_02_075500471 chr5:147560319-147578706 Sample_02_0755 Embryo ES-derived progenitors_DE FOXA2 -/- 471 7 533 13 2 55 0 JAKMIP2-AS1
SE_02_086100264 chr5:147561426-147574912 Sample_02_0861 iPSCs SAH_WT 264 7 408 12 2 48 0 JAKMIP2-AS1
SE_02_067700095 chr5:147561429-147577937 Sample_02_0677 Embryo H1 hESC-derived neural progenitor cells_Smad_6hr 95 11 475 13 2 50 0 JAKMIP2-AS1,DPYSL3
SE_02_068100135 chr5:147561481-147578417 Sample_02_0681 Embryo H1 hESC-derived neural progenitor cells_Smad_72hr 135 14 483 13 2 52 0 JAKMIP2-AS1,DPYSL3
SE_02_067800147 chr5:147561514-147574984 Sample_02_0678 Embryo H1 hESC-derived neural progenitor cells_Smad_12hr 147 7 403 12 2 47 0 JAKMIP2-AS1,DPYSL3
SE_02_068000111 chr5:147561822-147577925 Sample_02_0680 Embryo H1 hESC-derived neural progenitor cells_Smad_48hr 111 16 462 12 2 49 0 JAKMIP2-AS1,DPYSL3
SE_02_067600301 chr5:147561881-147574967 Sample_02_0676 Embryo H1 hESC-derived neural progenitor cells_Smad_3hr 301 10 395 11 2 47 0 JAKMIP2-AS1,DPYSL3
SE_02_067900249 chr5:147562209-147578152 Sample_02_0679 Embryo H1 hESC-derived neural progenitor cells_Smad_24hr 249 10 454 12 2 50 0 JAKMIP2-AS1,DPYSL3
SE_02_075201277 chr5:147565995-147579070 Sample_02_0752 Embryo ES-derived progenitors_DE_wild type 1277 2 362 11 2 32 0 JAKMIP2-AS1
SE_02_148100714 chr5:147619354-147640459 Sample_02_1481 Bone MIC 714 7 595 60 0 74 340 JAKMIP2,JAKMIP2-AS1
SE_02_148501183 chr5:147620955-147634236 Sample_02_1485 Bone SK-ES-1 1183 3 387 40 0 21 177 JAKMIP2,JAKMIP2-AS1
SE_02_147600683 chr5:147625678-147640475 Sample_02_1476 Bone EW-1 683 5 420 39 0 64 276 JAKMIP2,JAKMIP2-AS1,DPYSL3
SE_02_148200574 chr5:147626001-147636858 Sample_02_1482 Bone POE 574 2 315 26 0 55 212 JAKMIP2,JAKMIP2-AS1,DPYSL3
SE_02_148600268 chr5:147627254-147639462 Sample_02_1486 Bone SK-N-MC 268 5 348 33 0 59 246 JAKMIP2,JAKMIP2-AS1
Genomic distribution of SEs associated with JAKMIP2-AS1
Genome Browser

The strength of the tissue affected by the gene

Expression of JAKMIP2-AS1

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)