Gene overview

Strategies/Algorithm: overlap Ensembl ID: ENSG00000271361
Gene: HTATSF1P2 Gene type: processed_pseudogene
Strand: - External links:
Genomic region: chr6:3023142-3023772 Genome Browser:

Super-enhancer search result of gene-based

SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_138300152 chr6:2976319-3023923 Sample_02_1383 Pancreas Pancreatic cancer cells_THZ1 152 14 1562 278 1 24 1771 LINC01011,NQO2,HTATSF1P2,SERPINB6
SE_02_064300654 chr6:2976664-3023877 Sample_02_0643 Mammary gland MDA-MB-436 654 5 1548 276 1 24 1760 LINC01011,NQO2,HTATSF1P2,SERPINB6
SE_02_045900632 chr6:2980997-3022698 Sample_02_0459 Blood ME-1_DMSO_6h 632 6 1377 258 1 24 1602 LINC01011,NQO2,HTATSF1P2,SERPINB6
SE_02_143200398 chr6:2988078-3028653 Sample_02_1432 Bone A673 STAG2 WT 398 11 1466 318 1 25 1899 LINC01011,NQO2,HTATSF1P2,SERPINB6,RIPK1
SE_02_153600638 chr6:3013244-3024733 Sample_02_1536 Mammary gland MDA-MB-231_ER?_L540Q_0min 638 2 422 121 1 12 921 NQO2,HTATSF1P2,SERPINB6,LINC01011
SE_02_109900682 chr6:3018241-3038462 Sample_02_1099 Haematopoietic and lymphoid tissue bone marrow K562_DMSO_noIFNG 682 7 778 204 0 9 730 NQO2,HTATSF1P2,SERPINB6,RIPK1,LINC01011
SE_02_098901684 chr6:3019234-3073096 Sample_02_0989 Kidney kidney cortex_WT 1684 12 1772 345 1 21 865 NQO2,HTATSF1P2,LINC01011,SERPINB6,RIPK1,BPHL
SE_02_131400348 chr6:3019494-3028835 Sample_02_1314 Brain hMGLs_TREM2-KO 348 3 417 116 0 5 707 NQO2,HTATSF1P2,SERPINB6,RIPK1,LINC01011
SE_04_000200782 chr6:3020871-3028716 Sample_04_0002 Blood cold shocked K562 782 1 350 97 0 1 554 HTATSF1P2,SERPINB6,NQO2,RIPK1,LINC01011
SE_04_000101059 chr6:3021055-3028826 Sample_04_0001 Blood heat shocked K562 1059 1 356 99 0 1 538 HTATSF1P2,SERPINB6,NQO2,RIPK1,LINC01011
SE_02_113000740 chr6:3021068-3038639 Sample_02_1130 Haematopoietic and lymphoid tissue bone marrow K562_??Np63?? expressing 740 3 676 172 0 5 536 HTATSF1P2,SERPINB6,NQO2,RIPK1,LINC01011
SE_02_054500998 chr6:3021140-3027339 Sample_02_0545 Bone marrow K562 WT 998 3 196 54 0 1 526 HTATSF1P2,SERPINB6,NQO2,RIPK1,LINC01011
SE_02_111600596 chr6:3021162-3028343 Sample_02_1116 Haematopoietic and lymphoid tissue bone marrow K562_native 596 3 280 81 0 1 525 HTATSF1P2,SERPINB6,NQO2,RIPK1,LINC01011
SE_02_131800484 chr6:3021693-3028875 Sample_02_1318 Brain hMGLs_SORL1-A528T 484 1 339 96 0 1 475 HTATSF1P2,SERPINB6,LINC01011,NQO2,RIPK1
SE_02_131500530 chr6:3021753-3031818 Sample_02_1315 Brain hMGLs_INPP5D SNP 530 2 450 117 0 1 473 HTATSF1P2,SERPINB6,LINC01011,NQO2,RIPK1
SE_02_131200465 chr6:3021809-3029077 Sample_02_1312 Brain hMGLs_WT 465 2 351 100 0 1 466 HTATSF1P2,SERPINB6,LINC01011,NQO2,RIPK1
SE_02_131700398 chr6:3021854-3028793 Sample_02_1317 Brain hMGLs_SORL1-KO 398 2 325 92 0 1 459 HTATSF1P2,SERPINB6,LINC01011,NQO2,RIPK1
SE_02_131300606 chr6:3021881-3028909 Sample_02_1313 Brain hMGLs_CD33_SNP 606 1 334 96 0 1 452 HTATSF1P2,SERPINB6,LINC01011,NQO2,RIPK1
SE_02_134800501 chr6:3021995-3028385 Sample_02_1348 Leukophereses leukophereses_p408 501 1 254 72 0 1 433 HTATSF1P2,SERPINB6,LINC01011,NQO2,RIPK1
SE_02_131600639 chr6:3022061-3028972 Sample_02_1316 Brain hMGLs_TREM2-R47H 639 1 331 94 0 1 423 HTATSF1P2,SERPINB6,LINC01011,NQO2,RIPK1
SE_02_105800881 chr6:3022249-3069825 Sample_02_1058 Bone A673_SA2 Rescue 881 11 1538 304 1 17 531 HTATSF1P2,NQO2,LINC01011,RIPK1,BPHL
SE_02_122000674 chr6:3022357-3028118 Sample_02_1220 Bone marrow JJN3 674 3 224 63 0 1 384 HTATSF1P2,NQO2,LINC01011,RIPK1
SE_02_122100811 chr6:3022412-3031787 Sample_02_1221 Bone marrow KMS11 811 3 422 108 0 1 379 HTATSF1P2,NQO2,LINC01011,RIPK1
SE_02_075001094 chr6:3023240-3031708 Sample_02_0750 Lymphoma Rec-1_GSI 1094 2 398 101 0 1 262 HTATSF1P2,NQO2,LINC01011,RIPK1

Genomic distribution of SEs associated with HTATSF1P2

The strength of the tissue affected by the gene


Expression of HTATSF1P2