SEdb 2.0
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Gene overview

Strategies/Algorithm: overlap Ensembl ID: ENSG00000186603
Gene: HPDL Gene type: protein_coding
Strand: + External links:
Genomic region: chr1:45326895-45328679 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_075200844 chr1:45315362-45337744 Sample_02_0752 Embryo ES-derived progenitors_DE_wild type 844 5 620 42 1 84 1266 HPDL,MUTYH,LINC01144,TOE1
SE_02_075501001 chr1:45315468-45337205 Sample_02_0755 Embryo ES-derived progenitors_DE FOXA2 -/- 1001 4 605 40 1 84 1266 HPDL,MUTYH,LINC01144,TOE1
SE_02_032200357 chr1:45325257-45341666 Sample_02_0322 Colon Caco-2 357 1 451 28 1 109 1703 HPDL,TOE1,MUTYH,LOC400752
SE_02_047800970 chr1:45326493-45337764 Sample_02_0478 Colon normal colon mucosa 970 5 291 14 1 83 1266 HPDL,MUTYH,LINC01144,TOE1,ZSWIM5
SE_02_004000617 chr1:45326840-45337789 Sample_02_0040 Embryo PFG 617 2 283 14 1 83 1221 HPDL,MUTYH,LOC400752,TOE1
SE_02_092900502 chr1:45328566-45350375 Sample_02_0929 Mid-gestation placenta trophoblast__CytT 502 11 599 38 4 177 2328 TESK2,MUTYH,HPDL,TOE1,LINC01144
SE_02_052400418 chr1:45328668-45348413 Sample_02_0524 Pancreas iPS derived pancreatic precursor cells_Lane2 418 4 561 35 4 170 2314 TESK2,MUTYH,HPDL,TOE1,LINC01144
Genomic distribution of SEs associated with HPDL
Genome Browser

The strength of the tissue affected by the gene

Expression of HPDL

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)