SEdb 2.0
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Gene overview

Strategies/Algorithm: overlap Ensembl ID: ENSG00000103942
Gene: HOMER2 Gene type: protein_coding
Strand: - External links:
Genomic region: chr15:82836946-82986153 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_057300679 chr15:82828114-82856459 Sample_02_0573 Blood Nalm6_1 679 8 839 98 0 68 1200 WHAMM,HOMER2,FSD2
SE_02_045900416 chr15:82828241-82918184 Sample_02_0459 Blood ME-1_DMSO_6h 416 22 2354 283 1 183 1420 WHAMM,HOMER2,FSD2
SE_02_059400746 chr15:82828325-82858485 Sample_02_0594 iPSC-derived neural progenitors 746 7 888 105 0 70 1200 WHAMM,HOMER2,FSD2
SE_02_073900630 chr15:82828816-82857494 Sample_02_0739 Blood Nalm6 630 11 856 101 0 70 1200 WHAMM,HOMER2,FSD2
SE_02_085701119 chr15:82829235-82855968 Sample_02_0857 Glioblastoma Glioblastoma neurosphere cell_HF-3035 1119 7 793 92 0 63 1200 WHAMM,HOMER2,FSD2
SE_02_143100721 chr15:82829550-82881359 Sample_02_1431 Blood T cell 721 6 1500 170 1 99 1370 WHAMM,HOMER2,FSD2
SE_02_111900555 chr15:82830550-82872906 Sample_02_1119 Blood KBM7 555 20 1222 138 0 88 1288 WHAMM,HOMER2,FSD2
SE_02_046000422 chr15:82830568-82911199 Sample_02_0460 Blood ME-1_I-10-49_6h 422 22 2116 243 1 171 1407 WHAMM,HOMER2,FSD2
SE_02_079300193 chr15:82830776-82852893 Sample_02_0793 Brain MES20 193 10 653 74 0 51 1027 WHAMM,HOMER2,FSD2
SE_02_104602711 chr15:82833206-82866199 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 2711 12 957 107 0 77 1180 WHAMM,HOMER2,FSD2
SE_01_010100029 chr15:82848218-82973427 Sample_01_0101 Pancreas pancreas_54y 29 45 3128 350 3 345 1069 HOMER2,FAM103A1,C15ORF40,FSD2,WHAMM
SE_01_007600663 chr15:82870763-82972277 Sample_01_0076 Gastrocnemius medialis gastrocnemius-medialis 663 13 2463 279 2 298 540 HOMER2,FAM103A1,C15ORF40
SE_01_009700472 chr15:82874085-82971869 Sample_01_0097 Gastrocnemius medialis gastrocnemius medialis_53y 472 25 2349 264 2 292 540 HOMER2,C15ORF40,FAM103A1
SE_01_009400866 chr15:82874563-82971818 Sample_01_0094 Gastrocnemius medialis gastrocnemius medialis_54y 866 22 2341 263 2 292 540 HOMER2,C15ORF40,FAM103A1
SE_02_140700066 chr15:82888627-82953428 Sample_02_1407 Prostate LNCaP_R1881 4h 66 11 1663 191 0 231 223 HOMER2,FAM103A1
SE_02_076400093 chr15:82889195-82923898 Sample_02_0764 Prostate LNCaP_DHT_DMSO_6h 93 6 914 115 0 101 50 HOMER2
SE_02_016800306 chr15:82889536-82922641 Sample_02_0168 Prostate LNCaP 306 3 874 110 0 99 50 HOMER2
SE_02_017000126 chr15:82889598-82922991 Sample_02_0170 Prostate LNCaP_R1881_DOX 126 4 880 111 0 99 50 HOMER2
SE_02_140900069 chr15:82889613-82953310 Sample_02_1409 Prostate LNCaP_R1881 4h_MED19_OE 69 9 1649 191 0 228 223 HOMER2,FAM103A1
SE_02_066400121 chr15:82889754-82923484 Sample_02_0664 Prostate LNCaP_DMSO 121 5 886 114 0 99 50 HOMER2
SE_02_067300168 chr15:82889763-82922341 Sample_02_0673 Prostate LNCAP_FA 168 5 860 109 0 89 50 HOMER2
SE_02_016900115 chr15:82889779-82923079 Sample_02_0169 Prostate LNCaP_R1881 115 4 877 112 0 99 50 HOMER2
SE_02_066900315 chr15:82890078-82922861 Sample_02_0669 Prostate prostate cancer_DSG 315 9 854 110 0 99 50 HOMER2
SE_02_140600323 chr15:82890195-82943988 Sample_02_1406 Prostate LNCaP_EtOH_vehicle_4h 323 9 1416 159 0 143 50 HOMER2,FAM103A1
SE_01_010300039 chr15:82890676-82973153 Sample_01_0103 Pancreas pancreas_37y 39 28 2070 237 2 269 470 HOMER2,C15ORF40,FAM103A1
SE_01_008000496 chr15:82900365-82924379 Sample_01_0080 Prostate prostate 496 2 602 76 0 58 0 HOMER2
SE_02_075201154 chr15:82903339-82914869 Sample_02_0752 Embryo ES-derived progenitors_DE_wild type 1154 4 294 25 0 6 0 HOMER2
SE_02_003801440 chr15:82904006-82914188 Sample_02_0038 Embryo DE 1440 3 269 23 0 6 0 HOMER2
SE_02_067200442 chr15:82909089-82961488 Sample_02_0672 Endometrium endometrium cancer_DSG 442 25 1308 137 0 189 420 HOMER2,FAM103A1
SE_00_005800656 chr15:82910674-82923972 Sample_00_0058 Stomach stomach 34y 656 8 334 45 0 41 0 HOMER2
SE_02_036800444 chr15:82913225-82971335 Sample_02_0368 Skeletal muscle NS134 444 12 1439 159 1 205 420 HOMER2,FAM103A1,C15ORF40
SE_02_093700381 chr15:82914548-82945251 Sample_02_0937 Retinal Pigmented Epithelial RPE190_Con 381 12 813 88 0 101 0 HOMER2,FAM103A1
SE_02_016200103 chr15:82914572-82921951 Sample_02_0162 Prostate C4-2B_vehicle_24h 103 6 198 31 0 21 0 HOMER2
SE_01_007100040 chr15:82915196-82971073 Sample_01_0071 Pancreas body-of-pancreas 40 8 1388 155 1 202 420 HOMER2,FAM103A1,C15ORF40
SE_02_066800355 chr15:82915364-82922507 Sample_02_0668 Prostate prostate cancer FA 355 9 184 29 0 35 0 HOMER2
SE_01_002200264 chr15:82915410-82921896 Sample_01_0022 Prostate C4-2B 264 4 175 29 0 19 0 HOMER2
SE_02_081900397 chr15:82915628-82953472 Sample_02_0819 Ovary Mucinous ovarian cancer 397 8 952 107 0 164 173 HOMER2,FAM103A1
SE_02_051000285 chr15:82915880-82921402 Sample_02_0510 Prostate LNCaP95_shGFP_DHT 285 3 149 22 0 17 0 HOMER2
SE_02_016300380 chr15:82915915-82921511 Sample_02_0163 Prostate C4-2B_SR2211_24h 380 5 151 21 0 17 0 HOMER2
SE_01_010500437 chr15:82915949-82952552 Sample_01_0105 Thyroid gland thyroid gland_54y 437 10 943 102 0 143 64 HOMER2,FAM103A1
SE_02_081800136 chr15:82916505-82953399 Sample_02_0818 Ovary High-grade serous ovarian cancer 136 8 930 102 0 160 173 HOMER2,FAM103A1
SE_02_067400814 chr15:82916775-82947510 Sample_02_0674 Endometrium E1_FA 814 14 818 84 0 111 0 HOMER2,FAM103A1
SE_02_036700508 chr15:82916859-82971560 Sample_02_0367 Skeletal muscle NS129 508 9 1347 144 1 199 420 HOMER2,FAM103A1,C15ORF40
SE_02_093500265 chr15:82916865-82960391 Sample_02_0935 Retinal Pigmented Epithelial RPE188_Con 265 17 1080 112 0 168 420 HOMER2,FAM103A1
SE_01_006800199 chr15:82916888-82922085 Sample_01_0068 Prostate: derived from metastatic site: vertebral metastasis VCaP 199 1 134 18 0 21 0 HOMER2
SE_00_003000275 chr15:82917299-82920691 Sample_00_0030 Pancreas pancreas 275 2 92 10 0 12 0 HOMER2
SE_02_093800413 chr15:82919013-82950814 Sample_02_0938 Retinal Pigmented Epithelial RPE190_TnT 413 9 820 79 0 123 0 HOMER2,FAM103A1
SE_02_093600443 chr15:82928258-82945499 Sample_02_0936 Retinal Pigmented Epithelial RPE188_TnT 443 11 477 42 0 60 0 HOMER2,FAM103A1
Genomic distribution of SEs associated with HOMER2
Genome Browser

The strength of the tissue affected by the gene

Expression of HOMER2

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)