SEdb 2.0
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Gene overview

Strategies/Algorithm: overlap Ensembl ID: ENSG00000148672
Gene: GLUD1 Gene type: protein_coding
Strand: - External links:
Genomic region: chr10:87050202-87094843 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_104602152 chr10:87009028-87064258 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 2152 12 1468 161 0 81 893 FAM25A,GLUD1,AGAP11,ADIRF,FAM35A
SE_02_108300481 chr10:87054039-87095021 Sample_02_1083 Macula macula 481 14 1038 111 1 111 765 GLUD1,FAM25A,FAM35A
SE_02_108200625 chr10:87054460-87096671 Sample_02_1082 Retina retina 625 9 1064 115 1 112 917 FAM35A,GLUD1,FAM25A
SE_02_143201092 chr10:87054753-87096127 Sample_02_1432 Bone A673 STAG2 WT 1092 12 1047 111 1 112 917 FAM35A,GLUD1,FAM25A
SE_02_104901559 chr10:87061734-87121444 Sample_02_1049 Peripheral blood CD4+ cell_ROMI 1559 16 1498 174 1 96 756 FAM35A,GLUD1,FAM25A
SE_02_051700861 chr10:87066088-87098417 Sample_02_0517 Esophagus TE5 861 13 791 93 1 66 718 FAM35A,GLUD1,FAM25A
SE_02_066000481 chr10:87070060-87097521 Sample_02_0660 Mammary gland MCF10DCIS 481 7 659 77 1 58 679 FAM35A,GLUD1,FAM25A
SE_02_103600683 chr10:87070982-87109554 Sample_02_1036 Mammary gland HCC70_XY018 683 13 970 112 1 66 679 FAM35A,GLUD1
SE_02_044501157 chr10:87076545-87097629 Sample_02_0445 Lung lung metastasis from primary osteosarcoma tumor M10 1157 8 480 51 0 55 601 FAM35A,GLUD1
SE_02_044401041 chr10:87079379-87104088 Sample_02_0444 Bone osteosarcoma tumor P10 1041 10 584 64 0 58 582 FAM35A,GLUD1
SE_02_051600771 chr10:87079541-87097542 Sample_02_0516 Esophagus KYSE70 771 4 395 44 0 55 582 FAM35A,GLUD1
SE_02_050500779 chr10:87079546-87097542 Sample_02_0505 Esophagus KYSE70_1 779 4 395 44 0 55 582 FAM35A,GLUD1
SE_02_154101012 chr10:87079561-87094954 Sample_02_1541 Nasopharyngeal HNE1 1012 4 347 37 0 49 384 GLUD1,FAM35A
SE_02_059401198 chr10:87079583-87096328 Sample_02_0594 iPSC-derived neural progenitors 1198 3 373 40 0 52 558 FAM35A,GLUD1
SE_02_050700355 chr10:87079592-87094839 Sample_02_0507 Esophagus TE7_1 355 8 345 37 0 46 345 GLUD1,FAM35A
SE_01_010500782 chr10:87079739-87097993 Sample_01_0105 Thyroid gland thyroid gland_54y 782 4 407 45 0 55 582 FAM35A,GLUD1
SE_02_142800471 chr10:87079787-87096396 Sample_02_1428 Shoulder fibroblast_316 471 3 372 42 0 52 558 FAM35A,GLUD1
SE_02_142700308 chr10:87079953-87096777 Sample_02_1427 Shoulder fibroblast_343 308 5 378 43 0 52 558 FAM35A,GLUD1
SE_02_143301150 chr10:87080034-87096378 Sample_02_1433 Bone A673 STAG2 null 1150 9 366 40 0 52 558 FAM35A,GLUD1
SE_02_125800691 chr10:87080190-87097594 Sample_02_1258 Liver Pancreatic cancer cells derived from liver metastasis 691 2 381 44 0 55 582 FAM35A,GLUD1
SE_02_103500823 chr10:87080203-87114689 Sample_02_1035 Mammary gland HCC70_Vehicle 823 8 831 92 0 66 582 FAM35A,GLUD1
SE_02_081600541 chr10:87080232-87106224 Sample_02_0816 Ovary Clear cell ovarian cancer 541 4 627 69 0 62 582 FAM35A,GLUD1
SE_02_125400463 chr10:87080375-87096340 Sample_02_1254 Bladder Bladder tumor Basal1 463 5 350 39 0 52 558 FAM35A,GLUD1
SE_02_142600386 chr10:87080535-87096047 Sample_02_1426 Shoulder fibroblast_341 386 3 336 35 0 52 558 FAM35A,GLUD1
SE_02_142500635 chr10:87080575-87093574 Sample_02_1425 Shoulder fibroblast_384 635 4 293 33 0 12 114 GLUD1,FAM35A
SE_02_105600487 chr10:87080621-87096758 Sample_02_1056 Esophagus ChTRT 487 2 350 39 0 52 558 FAM35A,GLUD1
SE_02_044800188 chr10:87080685-87096674 Sample_02_0448 Bone MNNG 188 6 348 39 0 52 558 FAM35A,GLUD1
SE_02_012400698 chr10:87080720-87097284 Sample_02_0124 Embryo Embryonic-stem-cells_Naive 698 4 354 38 0 55 582 FAM35A,GLUD1
SE_02_094800916 chr10:87080739-87096342 Sample_02_0948 Pharyng Detroit562 916 2 338 35 0 52 558 FAM35A,GLUD1
SE_02_136600487 chr10:87080750-87094998 Sample_02_1366 Pancreas BxPC3-untreated 487 7 311 32 0 51 394 GLUD1,FAM35A
SE_02_105700456 chr10:87080750-87096933 Sample_02_1057 Esophagus GihTRT 456 3 349 38 0 53 564 FAM35A,GLUD1
SE_01_010700653 chr10:87080777-87096669 Sample_01_0107 Esophagus esophagus squamous epithelium 653 4 346 38 0 52 558 FAM35A,GLUD1
SE_02_081701012 chr10:87080903-87096121 Sample_02_0817 Ovary Epithelial ovarian cancer 1012 5 327 34 0 52 558 FAM35A,GLUD1
SE_02_137400849 chr10:87080942-87094990 Sample_02_1374 Pancreas Pancreatic_tumor_associated_fibroblasts_B009B_untreated 849 6 306 32 0 51 391 GLUD1,FAM35A
SE_02_075700532 chr10:87081012-87118128 Sample_02_0757 Embryo ES-derived progenitors_FOXA2 -/- 532 8 893 96 0 68 582 FAM35A,GLUD1
SE_02_055500490 chr10:87081037-87096801 Sample_02_0555 Other HAP1_WT 490 2 339 37 0 52 560 FAM35A,GLUD1
SE_02_132500510 chr10:87081056-87092349 Sample_02_1325 Hindbrain Hindbrain derived neural stem cells_NS19_H3.3K27M_WT 510 5 254 29 0 6 82 GLUD1,FAM35A
SE_02_048101947 chr10:87081058-87098109 Sample_02_0481 Mammary gland MDA-MB231 1947 5 368 38 0 55 582 FAM35A,GLUD1
SE_01_009500398 chr10:87081064-87094945 Sample_01_0095 Embryo neuroepithelial stem cell stably expressing HES5 originated from H9 398 2 300 30 0 49 379 GLUD1,FAM35A
SE_02_151100477 chr10:87081071-87094274 Sample_02_1511 Lung H3122_untreated 477 6 286 30 0 16 204 GLUD1,FAM35A
SE_02_098901214 chr10:87081230-87099228 Sample_02_0989 Kidney kidney cortex_WT 1214 7 391 43 0 55 582 FAM35A,GLUD1
SE_02_097200566 chr10:87081257-87096282 Sample_02_0972 Brain H3.3K27M-KO_BT245-D2p8-Rx_R1_cells 566 3 319 32 0 52 558 FAM35A,GLUD1
SE_02_047500441 chr10:87081305-87094165 Sample_02_0475 Induced hepatocyte-like cells hepatocyte-like cells 441 4 277 28 0 15 164 GLUD1,FAM35A
SE_02_141001268 chr10:87081331-87094926 Sample_02_1410 Brain GSC6 1268 2 291 28 0 49 369 GLUD1,FAM35A
SE_02_070800373 chr10:87081410-87093458 Sample_02_0708 Pancreas hF3 organoid 373 8 266 28 0 11 114 GLUD1,FAM35A
SE_02_146500415 chr10:87081445-87103638 Sample_02_1465 Ovary CAOV4cis 415 5 511 55 0 58 582 FAM35A,GLUD1
SE_02_071200662 chr10:87081497-87094956 Sample_02_0712 Pancreas BxPC3_sgNEG 662 3 289 28 0 49 384 GLUD1,FAM35A
SE_02_113900770 chr10:87081821-87096617 Sample_02_1139 Retinal Pigmented Epithelial RPE1-anaphase/telophase 770 4 313 32 0 52 558 FAM35A,GLUD1
SE_02_017100940 chr10:87081859-87096956 Sample_02_0171 Lung IMR-90_proliferating 940 3 317 32 0 53 564 FAM35A,GLUD1
SE_02_126301086 chr10:87081862-87094985 Sample_02_1263 Bone Im-GCT-4072_G34W unedited 1086 3 279 26 0 51 391 GLUD1,FAM35A
SE_02_070700322 chr10:87081866-87094057 Sample_02_0707 Pancreas BxPC3 WT 322 6 263 26 0 15 143 GLUD1,FAM35A
SE_02_137801208 chr10:87081895-87093107 Sample_02_1378 Pancreas Pancreatic_tumor_associated_fibroblasts_CAF08_untreated 1208 4 244 25 0 7 114 GLUD1,FAM35A
SE_02_071100395 chr10:87081896-87094927 Sample_02_0711 Pancreas hN35_organoid 395 4 279 26 0 49 370 GLUD1,FAM35A
SE_02_043000460 chr10:87081901-87094198 Sample_02_0430 Kidney 12364284 460 3 265 26 0 15 174 GLUD1,FAM35A
SE_02_096500586 chr10:87081925-87094955 Sample_02_0965 Brain H3.3K27M_HSJ031-C3-Rx_cells 586 3 279 26 0 49 384 GLUD1,FAM35A
SE_02_126700424 chr10:87081931-87096447 Sample_02_1267 Bone Im-GCT-4072_G34W 424 3 310 31 0 52 558 FAM35A,GLUD1
SE_02_126400814 chr10:87081931-87096797 Sample_02_1264 Bone Im-GCT-4072_G34W KO 814 2 317 32 0 52 559 FAM35A,GLUD1
SE_02_071000831 chr10:87081943-87093072 Sample_02_0710 Pancreas hN34_organoid 831 5 243 25 0 7 114 GLUD1,FAM35A
SE_02_145500679 chr10:87081962-87094972 Sample_02_1455 Arter pulmonary arterial smooth muscle cells_PAH2_sialdh1a3 679 2 279 26 0 50 387 GLUD1,FAM35A
SE_02_145400674 chr10:87081964-87094999 Sample_02_1454 Arter pulmonary arterial smooth muscle cells_PAH1_sialdh1a3 674 4 279 26 0 51 395 GLUD1,FAM35A
SE_02_077400216 chr10:87081968-87094966 Sample_02_0774 Prostate 22Rv1_delSite1_Clone11/12-D8 216 3 279 26 0 49 386 GLUD1,FAM35A
SE_02_145100573 chr10:87081970-87094977 Sample_02_1451 Arter pulmonary arterial smooth muscle cells_PAH1_sictrl 573 3 279 26 0 51 388 GLUD1,FAM35A
SE_02_145200520 chr10:87081971-87094976 Sample_02_1452 Arter pulmonary arterial smooth muscle cells_PAH2_sictrl 520 3 279 26 0 51 388 GLUD1,FAM35A
SE_01_010101391 chr10:87082259-87095025 Sample_01_0101 Pancreas pancreas_54y 1391 3 275 26 0 51 407 GLUD1,FAM35A
SE_00_001101072 chr10:87082364-87096265 Sample_00_0011 Esophagus esophagus 1072 2 298 28 0 52 558 FAM35A,GLUD1
SE_02_032601305 chr10:87082365-87095016 Sample_02_0326 Liver hepatocytes_d3 1305 5 272 25 0 51 403 GLUD1,FAM35A
SE_01_011700402 chr10:87082377-87094975 Sample_01_0117 Lung fibroblast of lung 402 3 272 25 0 51 388 GLUD1,FAM35A
SE_02_099100714 chr10:87082425-87096614 Sample_02_0991 Breast cancer cell line lung metastatic variant MDA-MB-231 LM2 714 3 306 31 0 52 558 FAM35A,GLUD1
SE_02_059200253 chr10:87083527-87095985 Sample_02_0592 PBMCs adult CD4+CD25hiCD127lo regulatory T cells 253 2 261 24 0 52 558 FAM35A,GLUD1
SE_02_017000513 chr10:87088009-87094998 Sample_02_0170 Prostate LNCaP_R1881_DOX 513 1 141 15 0 50 394 GLUD1,FAM35A
SE_02_077200250 chr10:87090508-87094875 Sample_02_0772 Prostate 22Rv1_delSite1_Clone11/12-F6 250 2 85 6 0 47 312 GLUD1,FAM35A
Genomic distribution of SEs associated with GLUD1
Genome Browser

The strength of the tissue affected by the gene

Expression of GLUD1

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)