SEdb 2.0
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Gene overview

Strategies/Algorithm: overlap Ensembl ID: ENSG00000141034
Gene: GID4 Gene type: protein_coding
Strand: + External links:
Genomic region: chr17:18039408-18068405 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_123900110 chr17:17990622-18043340 Sample_02_1239 Skin Waga_virus_positive 110 20 1297 107 7 174 2072 LRRC48,ATPAF2,GID4,TOM1L2,DRG2
SE_02_123600074 chr17:17994568-18043590 Sample_02_1236 Skin MKL1_virus_positive 74 20 1207 92 5 167 1892 LRRC48,ATPAF2,GID4,TOM1L2,DRG2
SE_02_075500398 chr17:18004702-18044237 Sample_02_0755 Embryo ES-derived progenitors_DE FOXA2 -/- 398 7 935 64 5 154 1671 LRRC48,ATPAF2,GID4,TOM1L2,DRG2
SE_02_075200406 chr17:18005583-18043984 Sample_02_0752 Embryo ES-derived progenitors_DE_wild type 406 11 911 64 5 150 1671 LRRC48,ATPAF2,GID4,TOM1L2,DRG2
SE_02_044600778 chr17:18032801-18041993 Sample_02_0446 Bone osteosarcoma tumor P2 778 3 213 12 2 68 351 ATPAF2,GID4,DRG2
SE_02_044700699 chr17:18033045-18045260 Sample_02_0447 Lung lung metastasis from primary osteosarcoma tumor M2 699 3 281 21 4 89 389 ATPAF2,GID4,DRG2
SE_02_136300572 chr17:18033680-18043149 Sample_02_1363 Blood Hudep2 572 4 227 14 2 68 351 ATPAF2,GID4,DRG2
SE_02_103602801 chr17:18051476-18102560 Sample_02_1036 Mammary gland HCC70_XY018 2801 11 1336 110 6 101 1496 DRG2,GID4,MYO15A,ATPAF2
Genomic distribution of SEs associated with GID4
Genome Browser

The strength of the tissue affected by the gene

Expression of GID4

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)