SEdb 2.0
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Gene overview

Strategies/Algorithm: overlap Ensembl ID: ENSG00000167741
Gene: GGT6 Gene type: protein_coding
Strand: - External links:
Genomic region: chr17:4556927-4560818 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_01_007200461 chr17:4506326-4564308 Sample_01_0072 Breast epithelium breast-epithelium 461 10 2482 110 2 338 4893 GGT6,SPNS2,MYBBP1A,SMTNL2
SE_02_085200308 chr17:4506734-4561807 Sample_02_0852 Mammary gland MCF7L-P 308 16 2399 105 2 329 4893 MYBBP1A,GGT6,SPNS2,SMTNL2
SE_02_115900310 chr17:4506734-4561807 Sample_02_1159 Mammary gland MCF7 310 15 2399 105 2 329 4893 MYBBP1A,GGT6,SPNS2,SMTNL2,ALOX15
SE_02_103500785 chr17:4509555-4565477 Sample_02_1035 Mammary gland HCC70_Vehicle 785 27 2427 108 2 325 4893 MYBBP1A,GGT6,SPNS2,SMTNL2
SE_02_103600909 chr17:4513041-4578605 Sample_02_1036 Mammary gland HCC70_XY018 909 29 2742 169 3 346 5012 MYBBP1A,GGT6,SPNS2,SMTNL2
SE_02_051700845 chr17:4513353-4565673 Sample_02_0517 Esophagus TE5 845 10 2284 104 2 301 4813 MYBBP1A,GGT6,SPNS2,SMTNL2
SE_02_103200189 chr17:4514947-4575717 Sample_02_1032 Head and neck SCC1 JQ1 189 21 2560 150 3 304 4791 MYBBP1A,GGT6,SPNS2,SMTNL2
SE_02_104901445 chr17:4533664-4565610 Sample_02_1049 Peripheral blood CD4+ cell_ROMI 1445 21 1517 59 1 183 4141 MYBBP1A,GGT6,SPNS2,SMTNL2
SE_02_104800948 chr17:4545824-4580703 Sample_02_1048 Peripheral blood CD4+ cell_UNTREATED 948 6 1281 109 1 130 2184 MYBBP1A,GGT6,SMTNL2,SPNS2
SE_02_138400772 chr17:4547964-4581791 Sample_02_1384 Other induced pluripotent stem cell derived Neuronal progenitor cell 772 7 1221 110 1 130 2055 MYBBP1A,GGT6,SMTNL2,SPNS2
SE_02_103100527 chr17:4549424-4576597 Sample_02_1031 Head and neck SCC1 contol 527 11 947 86 1 97 1653 MYBBP1A,GGT6,SMTNL2
SE_02_077500875 chr17:4557307-4626589 Sample_02_0775 Pancreas EndoC-BH1_SE 875 26 2230 198 12 264 2448 SMTNL2,GGT6,ALOX15,MYBBP1A
SE_02_019300357 chr17:4558086-4590161 Sample_02_0193 Kidney Patient_x750N 357 3 1072 123 2 135 1123 SMTNL2,GGT6,MYBBP1A
SE_02_054400171 chr17:4558354-4605117 Sample_02_0544 Brain Kelly_ResVeh 171 13 1616 169 9 211 1759 SMTNL2,GGT6,ALOX15,MYBBP1A
SE_00_002001172 chr17:4559826-4611987 Sample_00_0020 Large intestine large-intestine_108d 1172 9 1777 179 10 215 1717 SMTNL2,GGT6,ALOX15,MYBBP1A
Genomic distribution of SEs associated with GGT6
Genome Browser

The strength of the tissue affected by the gene

Expression of GGT6

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)