Gene overview

Strategies/Algorithm: overlap Ensembl ID:
Gene: GCN1L1 Gene type:
Strand: External links:
Genomic region: :- Genome Browser:

Super-enhancer search result of gene-based

SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_00_004200766 chr12:120060739-120133817 Sample_00_0042 Stomach stomach_30y 766 10 2024 133 7 239 2967 CCDC64,RAB35,GCN1L1
SE_00_001100653 chr12:120067488-120127420 Sample_00_0011 Esophagus esophagus 653 8 1658 116 7 177 2288 CCDC64,RAB35,GCN1L1
SE_02_039601034 chr12:120078692-120142939 Sample_02_0396 Skin NHEK-D 1034 14 1822 114 6 255 3364 CCDC64,RAB35,GCN1L1
SE_02_003600222 chr12:120084899-120127824 Sample_02_0036 Embryo H7 222 11 1226 87 6 149 2021 CCDC64,RAB35,GCN1L1
SE_00_000301205 chr12:120086356-120127589 Sample_00_0003 Adrenal gland adrenal-gland_97d 1205 6 1191 85 6 143 1992 CCDC64,RAB35,GCN1L1
SE_02_032100089 chr12:120086357-120137418 Sample_02_0321 Peripheral blood MO1043_ICN1_HA_H3K27Ac_b 89 7 1492 92 6 197 2804 CCDC64,RAB35,GCN1L1
SE_01_008401198 chr12:120086369-120133668 Sample_01_0084 Spleen spleen 1198 8 1382 90 6 168 2478 CCDC64,RAB35,GCN1L1
SE_02_012300146 chr12:120086400-120135361 Sample_02_0123 Haematopoietic and lymphoid tissue GRANTA-519 146 8 1440 91 6 183 2637 CCDC64,RAB35,GCN1L1
SE_02_032000160 chr12:120100767-120137202 Sample_02_0320 Peripheral blood MO1043_ICN1_HA_H3K27Ac_a 160 4 1049 61 6 110 1603 RAB35,GCN1L1
SE_02_039800232 chr12:120180929-120202696 Sample_02_0398 Mammary gland MDA-MB-231-MCF-7 232 2 613 39 0 74 965 RPLP0,GCN1L1,PXN
SE_02_021200091 chr12:120190451-120203091 Sample_02_0212 Burkitts lymphoma of the left maxilla Raji_DMSO 91 2 356 16 0 61 700 RPLP0,GCN1L1,PXN
SE_02_000200346 chr12:120191772-120203009 Sample_02_0002 Mammary gland MCF-7_10Gygamma_2.5h 346 1 320 15 0 59 678 RPLP0,GCN1L1,PXN
SE_02_031000762 chr12:120192591-120202769 Sample_02_0310 Neuroblastoma SJNB8 762 3 296 15 0 59 678 RPLP0,GCN1L1,PXN
SE_02_031200592 chr12:120192650-120236238 Sample_02_0312 Neuroblastoma SK-N-BE_2-C 592 6 1158 49 0 210 3290 RPLP0,PXN,GCN1L1
SE_02_040300219 chr12:120192827-120202945 Sample_02_0403 Mammary gland T-47D_untreat 219 1 287 14 0 59 678 RPLP0,GCN1L1,PXN
SE_02_042700485 chr12:120192875-120203074 Sample_02_0427 Colon HCT116_shPAF1 485 1 292 14 0 59 678 RPLP0,GCN1L1,PXN
SE_02_033200475 chr12:120193003-120202698 Sample_02_0332 Haematopoietic and lymphoid tissue MOLM14_DMSO_9 475 2 277 14 0 59 678 RPLP0,GCN1L1,PXN
SE_02_015000664 chr12:120193026-120202910 Sample_02_0150 Mammary gland MDA-MB-231_GATA3 664 1 278 14 0 59 678 RPLP0,GCN1L1,PXN
SE_02_035200542 chr12:120193145-120202781 Sample_02_0352 Colon HCT116 542 2 270 13 0 59 678 RPLP0,GCN1L1,PXN
SE_02_035500371 chr12:120193201-120202683 Sample_02_0355 Colon HCT15 371 3 269 13 0 59 678 RPLP0,GCN1L1,PXN
SE_02_015100570 chr12:120193297-120203262 Sample_02_0151 Mammary gland MDA-MB-231_TA1del 570 1 281 15 0 59 678 RPLP0,GCN1L1,PXN
SE_02_032800282 chr12:120193480-120202611 Sample_02_0328 Embryo H9_naive 282 1 261 12 0 59 678 RPLP0,GCN1L1,PXN
SE_02_036900611 chr12:120193866-120202722 Sample_02_0369 Skeletal muscle RD 611 2 255 12 0 59 678 RPLP0,GCN1L1,PXN
SE_02_037900611 chr12:120193866-120202722 Sample_02_0379 Skeletal muscle RD-Fusion-Negative-Rhabdomyosarcoma 611 2 255 12 0 59 678 RPLP0,GCN1L1,PXN

Genomic distribution of SEs associated with GCN1L1

The strength of the tissue affected by the gene


Expression of GCN1L1