SEdb 2.0
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Gene overview

Strategies/Algorithm: overlap Ensembl ID: ENSG00000150201
Gene: FXYD4 Gene type: protein_coding
Strand: + External links:
Genomic region: chr10:43371636-43376335 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_104600053 chr10:43192600-43378506 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 53 71 5466 499 24 241 2456 FXYD4,RASGEF1A,HNRNPF
SE_02_008600893 chr10:43285768-43379055 Sample_02_0086 Pancreas CAPAN1 893 11 2685 208 11 31 628 FXYD4,HNRNPF,RASGEF1A
SE_02_098900217 chr10:43304603-43421887 Sample_02_0989 Kidney kidney cortex_WT 217 27 3424 326 12 156 1672 HNRNPF,FXYD4,ZNF487,RASGEF1A
SE_02_125800092 chr10:43321701-43421689 Sample_02_1258 Liver Pancreatic cancer cells derived from liver metastasis 92 26 2900 297 9 156 1672 HNRNPF,FXYD4,ZNF487
SE_02_120500752 chr10:43322629-43391798 Sample_02_1205 Brain NB3 752 20 1997 194 9 77 915 HNRNPF,FXYD4,ZNF487,ZNF239,RASGEF1A
SE_02_081900124 chr10:43336666-43421510 Sample_02_0819 Ovary Mucinous ovarian cancer 124 22 2457 251 8 154 1672 HNRNPF,FXYD4,ZNF487
SE_02_102900106 chr10:43338212-43422958 Sample_02_1029 Colon HCT116 106 44 2449 249 8 158 1672 HNRNPF,FXYD4,ZNF487
SE_02_115100269 chr10:43338453-43399416 Sample_02_1151 Mammary gland MCF-7_UNTR 269 18 1762 171 8 118 1326 HNRNPF,FXYD4,ZNF487
SE_02_121300342 chr10:43339128-43391289 Sample_02_1213 Brain GBM31 342 16 1496 139 8 77 915 HNRNPF,FXYD4,ZNF487
SE_02_120300492 chr10:43342679-43391134 Sample_02_1203 Brain NB1 492 14 1376 133 8 77 915 HNRNPF,FXYD4,ZNF487
SE_02_117300436 chr10:43347936-43391706 Sample_02_1173 Brain GBM01 436 19 1281 123 8 77 915 HNRNPF,FXYD4,ZNF487
SE_02_101300267 chr10:43348000-43387327 Sample_02_1013 Brain Lateral temporal lobe_6T_AD 267 12 1141 108 8 61 807 HNRNPF,FXYD4,ZNF487
SE_02_120400633 chr10:43348057-43391129 Sample_02_1204 Brain NB2 633 10 1260 121 8 77 915 HNRNPF,FXYD4,ZNF487,ZNF239,RASGEF1A
SE_02_100000109 chr10:43348790-43391590 Sample_02_1000 Brain Lateral temporal lobe_15T_Young 109 8 1242 121 8 77 915 HNRNPF,FXYD4,ZNF487,RASGEF1A
SE_02_101100129 chr10:43348856-43374463 Sample_02_1011 Brain Lateral temporal lobe_5T_AD 129 8 689 72 5 10 305 FXYD4,HNRNPF
SE_02_100500240 chr10:43349038-43373742 Sample_02_1005 Brain Lateral temporal lobe_11T_Old 240 4 667 71 5 9 222 FXYD4,HNRNPF,RASGEF1A
SE_02_100900233 chr10:43349079-43382170 Sample_02_1009 Brain Lateral temporal lobe_2T_AD 233 7 919 93 5 19 628 FXYD4,HNRNPF
SE_02_056300066 chr10:43349448-43421395 Sample_02_0563 Mammary gland MCF7L-P_0h 66 19 2108 223 8 154 1672 HNRNPF,FXYD4,ZNF487
SE_02_100600204 chr10:43350877-43374423 Sample_02_1006 Brain Lateral temporal lobe_13T_Old 204 4 636 68 5 10 302 FXYD4,HNRNPF
SE_02_004000744 chr10:43353008-43402880 Sample_02_0040 Embryo PFG 744 7 1487 154 7 120 1326 HNRNPF,FXYD4,ZNF487P
SE_02_075700516 chr10:43353072-43400211 Sample_02_0757 Embryo ES-derived progenitors_FOXA2 -/- 516 8 1406 145 7 118 1326 HNRNPF,FXYD4,ZNF487
SE_02_075600761 chr10:43353102-43378015 Sample_02_0756 Embryo ES-derived progenitors_FG FOXA2 -/- 761 5 701 70 4 19 628 FXYD4,HNRNPF
SE_02_075300251 chr10:43353167-43400065 Sample_02_0753 Embryo ES-derived progenitors_FG type 251 10 1401 145 7 118 1326 HNRNPF,FXYD4,ZNF487
SE_02_104800609 chr10:43356327-43401032 Sample_02_1048 Peripheral blood CD4+ cell_UNTREATED 609 9 1355 133 6 120 1326 HNRNPF,FXYD4,ZNF487
SE_02_100200065 chr10:43362562-43373736 Sample_02_1002 Brain Lateral temporal lobe_18T_Young 65 2 299 22 1 9 218 FXYD4,HNRNPF
SE_02_100700261 chr10:43362590-43380523 Sample_02_1007 Brain Lateral temporal lobe_14T_Old 261 4 499 41 1 19 628 FXYD4,HNRNPF
Genomic distribution of SEs associated with FXYD4
Genome Browser

The strength of the tissue affected by the gene

Expression of FXYD4

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)