SEdb 2.0
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Gene overview

Strategies/Algorithm: overlap Ensembl ID: ENSG00000217128
Gene: FNIP1 Gene type: protein_coding
Strand: - External links:
Genomic region: chr5:131641714-131797063 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_104900017 chr5:131187502-131647745 Sample_02_1049 Peripheral blood CD4+ cell_ROMI 17 224 11798 852 52 624 2998 RAPGEF6,CDC42SE2,FNIP1,LYRM7,HINT1
SE_02_104301824 chr5:131580098-131653999 Sample_02_1043 Peripheral blood Peripheral blood cells_CTCL1200 1824 23 1852 121 9 98 521 FNIP1,RAPGEF6
SE_02_130200477 chr5:131590512-131684888 Sample_02_1302 Lymphoma RL DMSO 477 26 2353 148 10 166 786 FNIP1,RAPGEF6
SE_02_142900801 chr5:131593061-131647948 Sample_02_1429 Blood GM12878_WT 801 14 1375 86 6 73 454 FNIP1,RAPGEF6
SE_02_031700428 chr5:131606220-131650247 Sample_02_0317 Neuroblastoma GICAN 428 6 1080 70 5 70 402 FNIP1,RAPGEF6
SE_02_017201257 chr5:131607614-131645228 Sample_02_0172 Lung IMR-90_quiescent 1257 9 925 62 3 53 355 FNIP1,RAPGEF6
SE_02_030100991 chr5:131609045-131645181 Sample_02_0301 Neuroblastoma GIMEN 991 6 891 62 3 53 355 FNIP1,RAPGEF6
SE_02_122900972 chr5:131611453-131680770 Sample_02_1229 Haematopoietic and lymphoid tissue bone marrow K562_Control 972 12 1732 115 7 147 707 FNIP1,RAPGEF6
SE_02_152900286 chr5:131614757-131658653 Sample_02_1529 Peripheral blood neutrophils_0BC75 286 6 1084 64 5 80 442 FNIP1,RAPGEF6
SE_02_010400185 chr5:131614920-131657824 Sample_02_0104 Blood neutrophils 185 9 1064 64 5 80 442 FNIP1,RAPGEF6
SE_02_153100187 chr5:131614993-131658868 Sample_02_1531 Peripheral blood neutrophils_0B9ZK 187 11 1087 65 5 80 442 FNIP1,RAPGEF6
SE_02_092800412 chr5:131615018-131658513 Sample_02_0928 Peripheral blood neutrophils_Ecoli 412 14 1075 64 5 80 442 FNIP1,RAPGEF6
SE_02_153000219 chr5:131615188-131683337 Sample_02_1530 Peripheral blood neutrophils_0BA0X 219 14 1692 107 7 147 707 FNIP1,RAPGEF6
SE_02_134000390 chr5:131618162-131642538 Sample_02_1340 Blood acute myeloid leukemia 390 10 608 38 2 32 185 FNIP1,RAPGEF6
SE_02_021300781 chr5:131628394-131651886 Sample_02_0213 Burkitts lymphoma of the left maxilla Raji_JQ1 781 5 570 27 2 65 422 FNIP1,RAPGEF6
SE_01_004100896 chr5:131630138-131645952 Sample_01_0041 Skin keratinocyte 896 2 383 21 1 47 355 FNIP1,RAPGEF6
SE_02_073000649 chr5:131632824-131649577 Sample_02_0730 Lymphoma J4_Mantle cell lymphoma tissue_DMSO 649 3 401 22 1 60 402 FNIP1,RAPGEF6
SE_02_046000711 chr5:131632867-131644863 Sample_02_0460 Blood ME-1_I-10-49_6h 711 5 284 17 0 46 347 FNIP1,RAPGEF6
SE_01_005200484 chr5:131633017-131658525 Sample_01_0052 Blood neutrophil 484 2 636 32 2 72 442 FNIP1,RAPGEF6
SE_02_073900227 chr5:131633164-131661097 Sample_02_0739 Blood Nalm6 227 4 717 37 2 72 442 FNIP1,RAPGEF6
SE_02_092700166 chr5:131633187-131683970 Sample_02_0927 Peripheral blood neutrophils_US 166 9 1268 76 4 139 707 FNIP1,RAPGEF6
SE_02_143100712 chr5:131633420-131657508 Sample_02_1431 Blood T cell 712 4 603 31 2 72 442 FNIP1,RAPGEF6
SE_02_135000492 chr5:131633597-131655197 Sample_02_1350 Leukophereses leukophereses_p456 492 6 532 28 2 72 442 FNIP1,RAPGEF6
SE_02_057500883 chr5:131633640-131647825 Sample_02_0575 Blood MOLM13_sgLKB1e2 883 3 345 20 1 53 402 FNIP1,RAPGEF6
SE_02_057300772 chr5:131633908-131658427 Sample_02_0573 Blood Nalm6_1 772 7 608 31 2 72 442 FNIP1,RAPGEF6
SE_02_024300419 chr5:131656119-131687102 Sample_02_0243 Foreskin foreskin_HFFs 419 5 762 52 2 67 265 FNIP1,RAPGEF6
SE_02_125300444 chr5:131656828-131688031 Sample_02_1253 Mammary gland CAMA1 ER+/FGFR1-amplified 444 10 756 51 2 67 265 FNIP1,RAPGEF6
SE_02_080900513 chr5:131668380-131688321 Sample_02_0809 Mammary gland T47D Serum 513 8 463 33 2 67 265 FNIP1,RAPGEF6
SE_02_016800205 chr5:131669814-131687492 Sample_02_0168 Prostate LNCaP 205 2 415 27 2 67 265 FNIP1,RAPGEF6
SE_02_143100378 chr5:131671029-131797939 Sample_02_1431 Blood T cell 378 23 3149 202 10 224 685 FNIP1,RAPGEF6
SE_02_122900866 chr5:131738506-131794709 Sample_02_1229 Haematopoietic and lymphoid tissue bone marrow K562_Control 866 32 1363 90 6 39 39 FNIP1,RAPGEF6
SE_04_000200529 chr5:131740973-131798572 Sample_04_0002 Blood cold shocked K562 529 9 1387 93 5 75 204 FNIP1,RAPGEF6
SE_02_103300267 chr5:131742328-131798221 Sample_02_1033 Haematopoietic and lymphoid tissue bone marrow K562 267 12 1348 90 5 75 204 FNIP1,RAPGEF6
SE_02_057601115 chr5:131742891-131760554 Sample_02_0576 Blood HEL_sgLKB1e2 1115 9 424 29 0 13 39 FNIP1
SE_02_054500909 chr5:131744085-131759187 Sample_02_0545 Bone marrow K562 WT 909 5 368 25 0 13 39 FNIP1,RAPGEF6
SE_02_045900674 chr5:131745101-131798218 Sample_02_0459 Blood ME-1_DMSO_6h 674 15 1287 85 5 71 165 FNIP1
SE_02_038200330 chr5:131746876-131798720 Sample_02_0382 Heart purified cardiomyocyte G296S mutants 330 9 1263 83 5 71 165 FNIP1
SE_02_142200376 chr5:131746981-131758955 Sample_02_1422 Haematopoietic and lymphoid tissue bone marrow K562_Triptolide_0h 376 6 302 21 0 9 0 FNIP1,RAPGEF6
SE_02_038100616 chr5:131747140-131774736 Sample_02_0381 Heart purified cardiomyocyte WT 616 4 675 45 3 19 0 FNIP1
SE_02_090500750 chr5:131747432-131811484 Sample_02_0905 Heart left ventricle_DCM_LV1033 750 14 1538 109 7 115 206 FNIP1,MEIKIN
SE_02_090801142 chr5:131747600-131811694 Sample_02_0908 Heart left ventricle_DCM_LV1262 1142 17 1544 109 7 112 206 FNIP1,MEIKIN
SE_02_090401003 chr5:131753086-131811618 Sample_02_0904 Heart left ventricle_DCM_LV1028 1003 15 1388 98 7 109 206 FNIP1,MEIKIN
SE_02_091300901 chr5:131753113-131811799 Sample_02_0913 Heart left ventricle_DCM_LV1304 901 20 1395 98 7 109 206 FNIP1,MEIKIN
SE_02_091000891 chr5:131753270-131811445 Sample_02_0910 Heart left ventricle_DCM_LV1275 891 19 1377 98 7 109 206 FNIP1,MEIKIN
SE_02_092800632 chr5:131794004-131798466 Sample_02_0928 Peripheral blood neutrophils_Ecoli 632 1 104 4 0 36 165 FNIP1
Genomic distribution of SEs associated with FNIP1
Genome Browser

The strength of the tissue affected by the gene

Expression of FNIP1

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)