SEdb 2.0
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Gene overview

Strategies/Algorithm: overlap Ensembl ID: ENSG00000104413
Gene: ESRP1 Gene type: protein_coding
Strand: + External links:
Genomic region: chr8:94641074-94707466 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_010500193 chr8:94600328-94659735 Sample_02_0105 Skin neonatal_keratinocytes 193 5 1629 177 2 93 739 ESRP1,LOC100288748,KIAA1429
SE_02_040300279 chr8:94600440-94658598 Sample_02_0403 Mammary gland T-47D_untreat 279 8 1590 175 2 93 739 ESRP1,LOC100288748,KIAA1429
SE_02_081700159 chr8:94600458-94643230 Sample_02_0817 Ovary Epithelial ovarian cancer 159 8 1142 129 2 78 671 ESRP1,LOC100288748,KIAA1429
SE_02_023700568 chr8:94612926-94644428 Sample_02_0237 Colon V389 568 6 869 94 0 77 709 ESRP1,LOC100288748
SE_02_024100453 chr8:94612969-94643582 Sample_02_0241 Colon V456 453 6 854 93 0 73 706 ESRP1,LOC100288748
SE_00_004200538 chr8:94612973-94643416 Sample_00_0042 Stomach stomach_30y 538 3 849 93 0 72 687 ESRP1,LOC100288748
SE_00_003500752 chr8:94612988-94643482 Sample_00_0035 Sigmoid colon sigmoid-colon 752 4 851 93 0 73 700 ESRP1,LOC100288748
SE_02_047800285 chr8:94613083-94654182 Sample_02_0478 Colon normal colon mucosa 285 16 1154 125 0 84 739 ESRP1,LOC100288748,INTS8
SE_02_129900535 chr8:94613086-94657471 Sample_02_1299 Liver liver 535 12 1248 136 0 84 739 ESRP1,LOC100288748
SE_02_047700390 chr8:94613125-94654351 Sample_02_0477 Colon intestinal epithelial organoids_139a 390 14 1162 126 0 84 739 ESRP1,LOC100288748
SE_01_009900695 chr8:94613498-94643284 Sample_01_0099 Colon transverse colon 695 4 839 92 0 64 675 ESRP1,LOC100288748
SE_02_075601037 chr8:94628248-94645331 Sample_02_0756 Embryo ES-derived progenitors_FG FOXA2 -/- 1037 3 450 38 0 67 709 ESRP1,LOC100288748
SE_02_123700539 chr8:94628491-94643445 Sample_02_1237 Skin MKL2_virus_positive 539 2 405 34 0 62 693 ESRP1,LOC100288748
SE_01_010100876 chr8:94628790-94643362 Sample_01_0101 Pancreas pancreas_54y 876 4 396 32 0 60 681 ESRP1,LOC100288748
SE_02_068500656 chr8:94631293-94643695 Sample_02_0685 Lung NCI-H1048_no infection 656 2 329 30 0 61 709 ESRP1,LOC100288748
SE_02_039600808 chr8:94631742-94659359 Sample_02_0396 Skin NHEK-D 808 6 782 77 0 72 739 ESRP1,LOC100288748
SE_02_023600615 chr8:94631755-94644935 Sample_02_0236 Colon V206 615 4 346 32 0 66 709 ESRP1,LOC100288748
SE_01_004600193 chr8:94637434-94658965 Sample_01_0046 Mammary gland MCF-7 193 2 620 66 0 70 714 ESRP1,LOC100288748
SE_02_000200161 chr8:94637438-94659664 Sample_02_0002 Mammary gland MCF-7_10Gygamma_2.5h 161 2 640 66 0 70 714 ESRP1,LOC100288748
SE_02_006300499 chr8:94637688-94660448 Sample_02_0063 Skin Keratinocytes 499 2 649 67 0 70 697 ESRP1,LOC100288748
SE_02_000500460 chr8:94637862-94659619 Sample_02_0005 Cervical cervical-cancer_KDM5C 460 2 630 66 0 70 679 ESRP1,LOC100288748
SE_02_035400845 chr8:94637878-94643682 Sample_02_0354 Colon Colo205 845 1 158 19 0 59 648 ESRP1,LOC100288748
SE_02_011500232 chr8:94638010-94658674 Sample_02_0115 Mammary gland MCF-7 232 2 597 64 0 70 671 ESRP1,LOC100288748,DPY19L4
SE_02_080900357 chr8:94638019-94643691 Sample_02_0809 Mammary gland T47D Serum 357 1 157 19 0 59 641 ESRP1,LOC100288748
SE_02_062400142 chr8:94638041-94658811 Sample_02_0624 Mammary gland TAMR_VEH 142 2 604 65 0 70 670 ESRP1,LOC100288748
SE_02_085300226 chr8:94638054-94643655 Sample_02_0853 Mammary gland MCF7L-TamR 226 1 157 19 0 59 638 ESRP1,LOC100288748
SE_02_062500152 chr8:94638070-94643461 Sample_02_0625 Mammary gland WS8_4OHT 152 1 152 19 0 59 623 ESRP1,LOC100288748
SE_02_062300170 chr8:94638070-94658864 Sample_02_0623 Mammary gland TAMR_E2 170 2 604 65 0 70 664 ESRP1,LOC100288748
SE_02_125800557 chr8:94638106-94644430 Sample_02_1258 Liver Pancreatic cancer cells derived from liver metastasis 557 1 166 20 0 63 629 ESRP1,LOC100288748
SE_02_016600180 chr8:94638119-94643608 Sample_02_0166 Mammary gland HCC1954_Parental 180 1 154 19 0 59 629 ESRP1,LOC100288748
SE_02_016700329 chr8:94638119-94643608 Sample_02_0167 Mammary gland HCC1954_LCC2 329 1 154 19 0 59 629 ESRP1,LOC100288748
SE_02_085200116 chr8:94638124-94658310 Sample_02_0852 Mammary gland MCF7L-P 116 4 585 63 0 70 659 ESRP1,LOC100288748
SE_02_115900115 chr8:94638124-94658313 Sample_02_1159 Mammary gland MCF7 115 4 585 63 0 70 659 ESRP1,LOC100288748
SE_02_062700157 chr8:94638129-94643592 Sample_02_0627 Mammary gland WS8_VEH 157 1 154 19 0 59 628 ESRP1,LOC100288748
SE_02_088400989 chr8:94638147-94644318 Sample_02_0884 Colon LoVo 989 1 164 20 0 63 629 ESRP1,LOC100288748
SE_02_062600204 chr8:94638183-94643440 Sample_02_0626 Mammary gland WS8_E2 204 1 149 19 0 58 609 ESRP1,LOC100288748
SE_02_009600372 chr8:94638183-94643553 Sample_02_0096 Mammary gland ZR-75-1_1 372 1 153 19 0 58 619 ESRP1,LOC100288748
SE_02_076500623 chr8:94638204-94643265 Sample_02_0765 Prostate 22RV1-DHT-DMSO_6h 623 1 144 18 0 54 588 ESRP1,LOC100288748
SE_02_081900618 chr8:94638217-94643746 Sample_02_0819 Ovary Mucinous ovarian cancer 618 1 153 19 0 59 622 ESRP1,LOC100288748
SE_00_002001296 chr8:94638218-94643700 Sample_00_0020 Large intestine large-intestine_108d 1296 1 152 19 0 57 622 ESRP1,LOC100288748
SE_02_153200670 chr8:94638234-94659151 Sample_02_1532 Mammary gland MCF10A 670 3 607 66 0 68 651 ESRP1,LOC100288748
SE_02_107600238 chr8:94638271-94643650 Sample_02_1076 Mammary gland MCF7_TET2WT-E2 238 1 152 19 0 57 617 ESRP1,LOC100288748
SE_02_003200863 chr8:94638312-94643600 Sample_02_0032 Pancreas pancreatic-islets-M 863 1 152 19 0 57 612 ESRP1,LOC100288748
SE_02_040400447 chr8:94638313-94643735 Sample_02_0404 Mammary gland ZR-75-1_2 447 1 153 19 0 59 612 ESRP1,LOC100288748
SE_02_107700218 chr8:94638317-94643453 Sample_02_1077 Mammary gland MCF7_TET2KO-E2 218 1 148 19 0 57 598 ESRP1,LOC100288748
SE_02_102900401 chr8:94638366-94643513 Sample_02_1029 Colon HCT116 401 1 149 19 0 57 594 ESRP1,LOC100288748
SE_02_014300263 chr8:94638390-94644389 Sample_02_0143 Colon HCT116_Parental 263 1 161 20 0 61 594 ESRP1,LOC100288748
SE_02_009900410 chr8:94638410-94673642 Sample_02_0099 Foreskin Epidermal-Stem-Cells_shDNMT3B 410 5 972 89 0 102 886 ESRP1,LOC100288748,DPY19L4
SE_02_094800473 chr8:94638430-94642877 Sample_02_0948 Pharyng Detroit562 473 1 132 16 0 53 524 ESRP1,LOC100288748
SE_00_003601073 chr8:94638472-94643720 Sample_00_0036 Small intestine small-intestine_108days 1073 1 150 19 0 59 580 ESRP1,LOC100288748
SE_02_009700340 chr8:94638529-94658577 Sample_02_0097 Foreskin Epidermal-Stem-Cells_shCTRL 340 3 588 64 0 68 599 ESRP1,LOC100288748
SE_02_147000636 chr8:94638533-94643286 Sample_02_1470 Umbilical Vein H441 636 1 142 18 0 53 534 ESRP1,LOC100288748
SE_01_004100724 chr8:94638579-94658844 Sample_01_0041 Skin keratinocyte 724 2 593 65 0 68 592 ESRP1,LOC100288748
SE_01_002700738 chr8:94638582-94658930 Sample_01_0027 Prostate epithelial-cell-of-prostate 738 2 595 66 0 68 590 ESRP1,LOC100288748
SE_01_002200225 chr8:94638602-94643215 Sample_01_0022 Prostate C4-2B 225 1 136 18 0 53 518 ESRP1,LOC100288748
SE_02_124800550 chr8:94638650-94658475 Sample_02_1248 Bladder RT4 550 6 578 62 0 68 584 ESRP1,LOC100288748
SE_02_154000405 chr8:94638663-94658604 Sample_02_1540 Nasopharyngeal HK1 405 4 581 63 0 68 584 ESRP1,LOC100288748
SE_02_064500531 chr8:94638691-94658690 Sample_02_0645 Tracheobronchial epithelial HTBE_H1N1_18h 531 3 583 63 0 68 581 ESRP1,LOC100288748
SE_02_051500458 chr8:94638705-94642983 Sample_02_0515 Esophagus KYSE140 458 1 128 16 0 53 488 ESRP1,LOC100288748
SE_02_050300458 chr8:94638743-94642983 Sample_02_0503 Esophagus KYSE140_1 458 1 128 16 0 53 483 ESRP1,LOC100288748
SE_02_004600514 chr8:94638762-94642949 Sample_02_0046 Embryo endodermal CyT49_ES_D10 514 1 125 15 0 53 483 ESRP1,LOC100288748
SE_02_004500430 chr8:94638772-94642919 Sample_02_0045 Embryo endodermal CyT49_ES_D7 430 2 125 15 0 53 483 ESRP1,LOC100288748
SE_02_004400380 chr8:94638862-94642426 Sample_02_0044 Embryo endodermal CyT49_ES_D5 380 2 105 12 0 50 476 ESRP1,LOC100288748
SE_02_001700647 chr8:94638896-94642890 Sample_02_0017 Embryo H9_ESC 647 1 121 15 0 53 474 ESRP1,LOC100288748
SE_02_020400273 chr8:94639127-94643305 Sample_02_0204 Stomach IM95 273 1 123 16 0 53 440 ESRP1,LOC100288748
SE_02_051100419 chr8:94640989-94645163 Sample_02_0511 Prostate LNCaP95_shARv7_ETOH 419 2 119 13 0 43 330 ESRP1,LOC100288748
SE_02_077800209 chr8:94640999-94658762 Sample_02_0778 Mammary gland MCF7_FASR 209 2 534 56 0 49 360 ESRP1,LOC100288748
SE_02_051000437 chr8:94641044-94644369 Sample_02_0510 Prostate LNCaP95_shGFP_DHT 437 1 95 11 0 42 314 ESRP1,LOC100288748
SE_02_050900415 chr8:94641051-94644350 Sample_02_0509 Prostate LNCaP95_shGFP_ETOH 415 1 95 11 0 42 314 ESRP1,LOC100288748
SE_02_103500778 chr8:94681632-94738833 Sample_02_1035 Mammary gland HCC70_Vehicle 778 15 1577 171 0 70 491 ESRP1,DPY19L4,LOC100288748
Genomic distribution of SEs associated with ESRP1
Genome Browser

The strength of the tissue affected by the gene

Expression of ESRP1

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)