Gene overview

Strategies/Algorithm: overlap Ensembl ID: ENSG00000040531
Gene: CTNS Gene type: protein_coding
Strand: + External links:
Genomic region: chr17:3636459-3663103 Genome Browser:

Super-enhancer search result of gene-based

SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_087501183 chr17:3624653-3649420 Sample_02_0875 Peripheral blood Peripheral blood-derived mast cells 1183 10 787 129 6 58 687 CTNS,SHPK,TRPV1,P2RX5-TAX1BP3,EMC6,TAX1BP3
SE_02_149201439 chr17:3627256-3648499 Sample_02_1492 Peripheral blood CD34+ derived peripheral blood-derived mast cells 1439 8 660 109 5 52 622 CTNS,SHPK,TRPV1,P2RX5-TAX1BP3,EMC6,TAX1BP3
SE_02_146001242 chr17:3630469-3641175 Sample_02_1460 Blood Mutz-3 1242 3 323 55 1 29 452 CTNS,SHPK,TRPV1,EMC6,TAX1BP3
SE_02_098901612 chr17:3639468-3669790 Sample_02_0989 Kidney kidney cortex_WT 1612 6 1007 136 5 128 2022 P2RX5-TAX1BP3,CTNS,TAX1BP3,EMC6,SHPK,TRPV1
SE_02_074500588 chr17:3639884-3668660 Sample_02_0745 Embryo ES derived cardiac progenitor cells_day7 588 6 967 134 5 99 1801 P2RX5-TAX1BP3,CTNS,TAX1BP3,SHPK,TRPV1,EMC6
SE_02_074701020 chr17:3640528-3668666 Sample_02_0747 Embryo ES derived ventricular cardiomyocyte_day80 1020 10 950 132 5 91 1738 P2RX5-TAX1BP3,CTNS,TAX1BP3,SHPK,TRPV1,EMC6
SE_02_102900923 chr17:3647138-3691253 Sample_02_1029 Colon HCT116 923 15 1447 145 3 143 3430 P2RX5-TAX1BP3,CTNS,TAX1BP3,EMC6,P2RX5,TRPV1,SHPK,GSG2
SE_02_117300980 chr17:3647695-3681114 Sample_02_1173 Brain GBM01 980 8 1097 132 3 115 2605 P2RX5-TAX1BP3,CTNS,TAX1BP3,EMC6,P2RX5,TRPV1,SHPK,GSG2
SE_02_097100832 chr17:3647894-3674519 Sample_02_0971 Brain H3.3K27M_XPS124018_xenograft 832 5 858 98 3 109 2467 P2RX5-TAX1BP3,CTNS,TAX1BP3,EMC6,P2RX5,TRPV1,SHPK,GSG2
SE_02_138100627 chr17:3648111-3691521 Sample_02_1381 Pancreas Pancreatic cancer cells_DMSO 627 21 1418 142 3 137 3365 P2RX5-TAX1BP3,CTNS,TAX1BP3,EMC6,P2RX5,TRPV1,SHPK,GSG2
SE_02_039600583 chr17:3655101-3691095 Sample_02_0396 Skin NHEK-D 583 8 1172 120 1 128 3210 P2RX5,TAX1BP3,TMEM93,CTNS,SHPK,TRPV1,GSG2
SE_01_006900909 chr17:3656871-3678900 Sample_01_0069 Adrenal gland adrenal-gland 909 3 713 97 1 97 2111 P2RX5,TAX1BP3,TMEM93,CTNS,SHPK,TRPV1,GSG2
SE_02_086900995 chr17:3657023-3668689 Sample_02_0869 Fibroblast VH10_NO_UV 995 7 407 61 1 64 1285 P2RX5-TAX1BP3,CTNS,TAX1BP3,EMC6,TRPV1,SHPK
SE_00_000301064 chr17:3657475-3669544 Sample_00_0003 Adrenal gland adrenal-gland_97d 1064 2 418 58 1 88 1482 TAX1BP3,TMEM93,CTNS,SHPK,TRPV1,P2RX5
SE_02_078000536 chr17:3657945-3670924 Sample_02_0780 Liver SMMC-7721 536 5 430 59 1 92 1617 P2RX5-TAX1BP3,CTNS,TAX1BP3,EMC6,TRPV1,SHPK
SE_02_027400944 chr17:3658031-3669623 Sample_02_0274 Endometriosis hTERT_KD 944 2 398 57 1 90 1422 TAX1BP3,TMEM93,CTNS,SHPK,TRPV1,P2RX5
SE_00_001101060 chr17:3658357-3669546 Sample_00_0011 Esophagus esophagus 1060 3 383 56 1 80 1345 TAX1BP3,TMEM93,CTNS,SHPK,TRPV1,P2RX5
SE_02_088901436 chr17:3658478-3669412 Sample_02_0889 Heart left ventricle_LV1183 1436 2 367 51 1 78 1317 P2RX5-TAX1BP3,CTNS,TAX1BP3,EMC6,TRPV1,SHPK
SE_01_010701307 chr17:3658544-3669668 Sample_01_0107 Esophagus esophagus squamous epithelium 1307 2 369 51 1 84 1351 P2RX5-TAX1BP3,CTNS,TAX1BP3,EMC6,TRPV1,SHPK
SE_02_091101208 chr17:3658805-3669365 Sample_02_0911 Heart left ventricle_DCM_LV1290 1208 3 352 48 1 76 1313 P2RX5-TAX1BP3,CTNS,TAX1BP3,EMC6,TRPV1,SHPK
SE_02_154100845 chr17:3658855-3668568 Sample_02_1541 Nasopharyngeal HNE1 845 4 318 46 1 48 1121 P2RX5-TAX1BP3,CTNS,TAX1BP3,EMC6,TRPV1,SHPK
SE_02_132200724 chr17:3658894-3669570 Sample_02_1322 Connective Tissue HT1080_WT 724 2 352 47 1 80 1347 P2RX5-TAX1BP3,CTNS,TAX1BP3,EMC6,TRPV1,SHPK
SE_00_003400783 chr17:3659018-3669584 Sample_00_0034 Right cardiac atrium right-cardiac-atrium 783 3 342 44 1 81 1349 TAX1BP3,TMEM93,CTNS,SHPK,TRPV1,P2RX5
SE_00_005200909 chr17:3659119-3668623 Sample_00_0052 Heart left ventricle 3y 909 2 310 44 1 48 1132 P2RX5-TAX1BP3,CTNS,TAX1BP3,EMC6,TRPV1,SHPK
SE_02_064501606 chr17:3659121-3668612 Sample_02_0645 Tracheobronchial epithelial HTBE_H1N1_18h 1606 3 310 44 1 48 1130 P2RX5-TAX1BP3,CTNS,TAX1BP3,EMC6,TRPV1,SHPK
SE_02_061001472 chr17:3659187-3669702 Sample_02_0610 Liposarcoma MLS 1765-92 1472 3 338 44 1 84 1353 P2RX5-TAX1BP3,CTNS,TAX1BP3,EMC6,TRPV1,SHPK
SE_02_102600607 chr17:3659198-3669902 Sample_02_1026 Esophagus KYSE200 607 2 340 42 1 84 1382 P2RX5-TAX1BP3,CTNS,TAX1BP3,EMC6,TRPV1,SHPK
SE_01_002200278 chr17:3659215-3669502 Sample_01_0022 Prostate C4-2B 278 2 337 42 1 80 1338 TAX1BP3,TMEM93,CTNS,SHPK,TRPV1,P2RX5
SE_02_126801058 chr17:3659436-3669313 Sample_02_1268 Bone Im-GCT-4072_G34W unedited_U3 1058 2 326 41 1 75 1301 P2RX5-TAX1BP3,CTNS,TAX1BP3,EMC6,SHPK

Genomic distribution of SEs associated with CTNS

The strength of the tissue affected by the gene


Expression of CTNS