SEdb 2.0
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Gene overview

Strategies/Algorithm: overlap Ensembl ID: ENSG00000150281
Gene: CTF1 Gene type: protein_coding
Strand: + External links:
Genomic region: chr16:30896614-30903547 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_013200911 chr16:30871744-30905052 Sample_02_0132 Lung 1015_CL 911 6 703 55 2 154 1662 CTF1,MIR762,BCL7C,ORAI3,NCRNA00095,FBXL19
SE_02_013100864 chr16:30872321-30904645 Sample_02_0131 Lung 1015_PT 864 7 676 52 2 149 1662 CTF1,MIR762,BCL7C,ORAI3,NCRNA00095,FBXL19
SE_00_004300187 chr16:30874168-30904980 Sample_00_0043 Stomach stomach_96d 187 5 647 48 2 153 1662 CTF1,MIR762,BCL7C,ORAI3,NCRNA00095,FBXL19
SE_02_011400489 chr16:30874173-30903504 Sample_02_0114 Mammary gland CAL51 489 5 621 44 2 139 1626 CTF1,MIR762,BCL7C,ORAI3,NCRNA00095,FBXL19
SE_00_003601170 chr16:30874224-30903412 Sample_00_0036 Small intestine small-intestine_108days 1170 5 618 43 2 139 1609 CTF1,MIR762,BCL7C,ORAI3,NCRNA00095,FBXL19
SE_02_004800393 chr16:30874309-30902850 Sample_02_0048 Embryo endodermal CyT49_HE 393 5 603 40 1 139 1497 CTF1,MIR762,BCL7C,ORAI3,NCRNA00095,FBXL19
SE_00_003400343 chr16:30874322-30904929 Sample_00_0034 Right cardiac atrium right-cardiac-atrium 343 5 644 48 2 153 1662 CTF1,MIR762,BCL7C,ORAI3,NCRNA00095,FBXL19
SE_00_002001593 chr16:30874323-30904611 Sample_00_0020 Large intestine large-intestine_108d 1593 6 636 45 2 148 1662 CTF1,MIR762,BCL7C,ORAI3,NCRNA00095,FBXL19
SE_00_003500442 chr16:30874369-30904686 Sample_00_0035 Sigmoid colon sigmoid-colon 442 6 636 45 2 150 1662 CTF1,MIR762,BCL7C,ORAI3,NCRNA00095,FBXL19
SE_00_002200666 chr16:30892575-30905073 Sample_00_0022 Lung lung_30y 666 2 256 16 1 129 1172 CTF1,MIR762,BCL7C,ORAI3,NCRNA00095,FBXL19
SE_00_001500832 chr16:30892806-30897642 Sample_00_0015 Lung IMR-90 832 1 107 2 0 78 620 CTF1,MIR762,BCL7C,NCRNA00095,FBXL19
SE_00_002400319 chr16:30892812-30903190 Sample_00_0024 Embryo mesendoderm 319 2 213 9 0 107 1009 CTF1,MIR762,BCL7C,ORAI3,NCRNA00095,FBXL19
SE_01_010701366 chr16:30893088-30897319 Sample_01_0107 Esophagus esophagus squamous epithelium 1366 1 89 2 0 66 548 BCL7C,CTF1,MIR762HG,MIR762,FBXL19,FBXL19-AS1,MIR4519
SE_00_002500871 chr16:30893099-30904800 Sample_00_0025 Muscle of leg muscle-of-leg 871 2 234 13 1 110 1036 CTF1,MIR762,BCL7C,ORAI3,NCRNA00095,FBXL19
SE_00_003900819 chr16:30893105-30905232 Sample_00_0039 Spleen spleen_3y 819 3 246 17 1 112 1033 CTF1,MIR762,BCL7C,ORAI3,NCRNA00095,FBXL19,HSD3B7
SE_00_002600744 chr16:30893131-30904665 Sample_00_0026 Muscle of trunk muscle-of-trunk 744 4 229 13 1 108 1027 CTF1,MIR762,BCL7C,ORAI3,NCRNA00095,FBXL19
SE_00_001100818 chr16:30893163-30904732 Sample_00_0011 Esophagus esophagus 818 2 233 13 1 109 1023 CTF1,MIR762,BCL7C,ORAI3,NCRNA00095,FBXL19
SE_00_002900419 chr16:30893179-30902833 Sample_00_0029 Ovary ovary 419 3 196 8 0 97 849 CTF1,MIR762,BCL7C,ORAI3,NCRNA00095,FBXL19
SE_01_003701100 chr16:30893210-30897620 Sample_01_0037 Liver hepatocyte 1100 1 99 2 0 68 520 CTF1,MIR762,BCL7C,NCRNA00095,FBXL19
SE_02_003800434 chr16:30893231-30903502 Sample_02_0038 Embryo DE 434 2 212 12 1 95 968 CTF1,MIR762,BCL7C,ORAI3,NCRNA00095,FBXL19
SE_00_004101089 chr16:30893291-30904653 Sample_00_0041 Stomach stomach_3y 1089 3 229 13 1 100 984 CTF1,MIR762,BCL7C,ORAI3,NCRNA00095,FBXL19
SE_02_033000882 chr16:30893319-30897369 Sample_02_0330 Endoderm MHG 882 1 91 2 0 60 489 CTF1,MIR762,BCL7C,NCRNA00095,FBXL19
SE_00_004000642 chr16:30893348-30905217 Sample_00_0040 Spleen spleen_30y 642 3 245 17 1 104 966 CTF1,MIR762,BCL7C,ORAI3,NCRNA00095,FBXL19,HSD3B7
SE_02_004300268 chr16:30893350-30903519 Sample_02_0043 Embryo endodermal CyT49_ES_D2 268 3 212 12 1 89 930 CTF1,MIR762,BCL7C,ORAI3,NCRNA00095,FBXL19
SE_02_004400621 chr16:30893384-30903422 Sample_02_0044 Embryo endodermal CyT49_ES_D5 621 5 210 12 1 89 908 CTF1,MIR762,BCL7C,ORAI3,NCRNA00095,FBXL19
SE_02_004500866 chr16:30893426-30903518 Sample_02_0045 Embryo endodermal CyT49_ES_D7 866 5 210 12 1 89 919 CTF1,MIR762,BCL7C,ORAI3,NCRNA00095,FBXL19
SE_02_075501512 chr16:30894239-30903421 Sample_02_0755 Embryo ES-derived progenitors_DE FOXA2 -/- 1512 3 191 10 1 58 712 BCL7C,CTF1,MIR762HG,FBXL19,ORAI3,MIR762,FBXL19-AS1,MIR4519
SE_02_134100417 chr16:30896100-30905969 Sample_02_1341 Blood MV411 417 4 199 15 1 64 633 CTF1,FBXL19,ORAI3,MIR762HG,MIR762,FBXL19-AS1,MIR4519,BCL7C
SE_02_034200875 chr16:30900931-30905478 Sample_02_0342 Liver HSPCs_F0 875 1 84 11 1 38 394 CTF1,MIR762,ORAI3,BCL7C,NCRNA00095,FBXL19
SE_02_068200480 chr16:30901097-30908326 Sample_02_0682 Blood Kasumi-1 480 4 132 13 2 46 394 CTF1,FBXL19,ORAI3,MIR762HG,MIR762,FBXL19-AS1,MIR4519,SETD1A,BCL7C
SE_02_083500915 chr16:30901475-30905495 Sample_02_0835 Bone marrow TEX-HIST1H3H-K27M-Rx_cells 915 1 80 11 1 38 394 CTF1,FBXL19,ORAI3,MIR762HG,MIR762,FBXL19-AS1,MIR4519,BCL7C
SE_02_046100481 chr16:30901485-30905176 Sample_02_0461 Blood MV-4-11-B cells 481 1 73 11 1 38 394 CTF1,FBXL19,ORAI3,MIR762HG,MIR762,FBXL19-AS1,MIR4519,BCL7C
SE_02_075600874 chr16:30901533-30927851 Sample_02_0756 Embryo ES-derived progenitors_FG FOXA2 -/- 874 4 560 47 4 222 1597 FBXL19-AS1,FBXL19,CTF1,ORAI3,MIR762HG,MIR762,MIR4519,SETD1A,BCL7C
SE_02_045900806 chr16:30901552-30905286 Sample_02_0459 Blood ME-1_DMSO_6h 806 1 72 11 1 38 394 CTF1,FBXL19,ORAI3,MIR762HG,MIR762,FBXL19-AS1,MIR4519,BCL7C
SE_02_146000931 chr16:30901573-30921312 Sample_02_1460 Blood Mutz-3 931 4 423 37 3 64 705 FBXL19-AS1,CTF1,FBXL19,ORAI3,MIR762HG,MIR762,MIR4519,SETD1A,BCL7C
SE_02_103501339 chr16:30901860-30903467 Sample_02_1035 Mammary gland HCC70_Vehicle 1339 1 33 6 1 23 355 CTF1,FBXL19,ORAI3,MIR762HG,MIR762,FBXL19-AS1,MIR4519,BCL7C
SE_02_103601090 chr16:30901895-30902980 Sample_02_1036 Mammary gland HCC70_XY018 1090 1 19 1 0 23 248 CTF1,FBXL19,ORAI3,MIR762HG,MIR762,FBXL19-AS1,MIR4519,BCL7C
SE_02_138400348 chr16:30901937-30927953 Sample_02_1384 Other induced pluripotent stem cell derived Neuronal progenitor cell 348 6 557 46 4 229 1636 FBXL19-AS1,FBXL19,CTF1,ORAI3,MIR762HG,MIR762,MIR4519,SETD1A,BCL7C
Genomic distribution of SEs associated with CTF1
Genome Browser

The strength of the tissue affected by the gene

Expression of CTF1

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)