SEdb 2.0
  1. Search
  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: overlap Ensembl ID: ENSG00000103249
Gene: CLCN7 Gene type: protein_coding
Strand: - External links:
Genomic region: chr16:1444934-1475084 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_116000305 chr16:1425849-1466444 Sample_02_1160 Embryo H1_shLuc 305 8 1951 200 1 160 5122 CLCN7,CCDC154,UNKL,C16ORF91,PTX4,TELO2
SE_02_138400334 chr16:1426813-1446496 Sample_02_1384 Other induced pluripotent stem cell derived Neuronal progenitor cell 334 8 903 90 1 60 2509 CLCN7,CCDC154,UNKL,C16ORF91,PTX4,TELO2
SE_02_088500090 chr16:1427837-1475997 Sample_02_0885 Blood NALM6_2 90 5 2257 261 2 178 5136 CLCN7,CCDC154,UNKL,C16ORF91,PTX4,TELO2
SE_02_057300222 chr16:1428487-1473364 Sample_02_0573 Blood Nalm6_1 222 11 2120 241 2 168 4887 CLCN7,CCDC154,UNKL,C16ORF91,PTX4,TELO2
SE_02_124900220 chr16:1428723-1480925 Sample_02_1249 Bone marrow RS4_11_DMSO_4h 220 20 2397 290 3 178 4999 CLCN7,CCDC154,UNKL,C16ORF91,PTX4,TMEM204,TELO2
SE_02_125100258 chr16:1428733-1480519 Sample_02_1251 Bone marrow RS4_11_AZD1775 _10h 258 16 2383 285 3 178 4999 CLCN7,CCDC154,UNKL,C16ORF91,PTX4,TMEM204,TELO2
SE_01_002000352 chr16:1443691-1481970 Sample_01_0020 Blood B-cell 352 4 1748 228 2 124 3363 CLCN7,CCDC154,UNKL,PTX4,C16ORF91,TELO2
SE_02_106900173 chr16:1443799-1481347 Sample_02_1069 Bone marrow Bone marrow aspirate 173 6 1727 223 2 122 3332 CLCN7,CCDC154,UNKL,C16ORF91,PTX4,TMEM204,TELO2
SE_02_046000450 chr16:1453037-1475874 Sample_02_0460 Blood ME-1_I-10-49_6h 450 5 1078 140 1 69 1455 CLCN7,UNKL,C16ORF91,PTX4,TELO2,CCDC154
SE_02_061700894 chr16:1457010-1490901 Sample_02_0617 HSPC FL CD34+CD38-/lowCD90+ HSPC 894 5 1480 207 4 83 1581 CLCN7,PTX4,UNKL,C16ORF91,TMEM204,TELO2,CCDC154
SE_02_010100723 chr16:1457415-1484687 Sample_02_0101 Peripheral blood Macrophages_GM-CSF_72h_IFN-y 723 3 1165 159 3 51 861 CLCN7,UNKL,PTX4,TMEM204,C16ORF91,TELO2,CCDC154
SE_02_075800339 chr16:1457548-1480955 Sample_02_0758 Peripheral blood REH 339 6 1021 139 2 50 837 CLCN7,UNKL,C16ORF91,PTX4,TMEM204,TELO2,CCDC154
SE_02_139300800 chr16:1458842-1481331 Sample_02_1393 Lymph node anaplastic large cell lymphoma cells_ALK+#54 800 4 945 134 2 48 752 CLCN7,UNKL,C16ORF91,PTX4,TMEM204,TELO2,CCDC154
SE_02_092800338 chr16:1459657-1484203 Sample_02_0928 Peripheral blood neutrophils_Ecoli 338 5 999 144 3 35 646 CLCN7,UNKL,C16ORF91,PTX4,TMEM204,TELO2,CCDC154
SE_02_035900294 chr16:1460279-1476416 Sample_02_0359 Colon Colo741 294 3 691 95 1 34 636 CLCN7,UNKL,PTX4,C16ORF91,TELO2,CCDC154
SE_02_155600582 chr16:1460675-1484550 Sample_02_1556 Gastrointestinal Stromal GIST-5_KIT e9 582 7 965 142 3 33 546 CLCN7,UNKL,C16ORF91,PTX4,TMEM204,TELO2,CCDC154
SE_02_025500396 chr16:1464488-1484313 Sample_02_0255 Haematopoietic and lymphoid tissue MOLM13 396 4 800 123 3 22 286 CLCN7,UNKL,PTX4,TMEM204,C16ORF91,TELO2,CCDC154
SE_02_073900215 chr16:1465277-1476405 Sample_02_0739 Blood Nalm6 215 1 471 73 1 19 231 CLCN7,C16ORF91,CCDC154,TELO2,PTX4
SE_02_103400518 chr16:1465922-1475810 Sample_02_1034 Blood AML cell 518 1 404 64 1 19 177 CLCN7,C16ORF91,CCDC154,TELO2,PTX4
SE_02_084100601 chr16:1466255-1491735 Sample_02_0841 Blood THP-1_untr 601 7 1015 169 4 50 817 CLCN7,PTX4,C16ORF91,TMEM204,TELO2,CCDC154,UNKL,C16orf91,IFT140
SE_02_036200300 chr16:1466824-1472959 Sample_02_0362 Haematopoietic and lymphoid tissue REH 300 1 259 44 1 9 0 CLCN7,PTX4,C16ORF91,CCDC154,TELO2
SE_02_025600774 chr16:1466842-1484299 Sample_02_0256 Peripheral blood MV411 774 4 671 114 3 20 177 CLCN7,C16ORF91,PTX4,TMEM204,TELO2,CCDC154
SE_02_133200306 chr16:1466995-1476213 Sample_02_1332 Blood Monomac6_CTRL 306 1 377 63 1 19 177 CLCN7,C16ORF91,CCDC154,TELO2,PTX4
SE_02_111900541 chr16:1467087-1475942 Sample_02_1119 Blood KBM7 541 1 350 60 1 19 177 CLCN7,C16ORF91,CCDC154,TELO2,PTX4
SE_02_058200245 chr16:1467240-1483977 Sample_02_0582 Blood MOLM13_SIK3TQ_HG 245 3 646 109 3 20 177 CLCN7,C16ORF91,PTX4,TMEM204,TELO2,CCDC154
SE_02_058100224 chr16:1467279-1483988 Sample_02_0581 Blood MOLM13_empty_HG 224 3 646 109 3 20 177 CLCN7,C16ORF91,PTX4,TMEM204,TELO2,CCDC154
SE_02_057800182 chr16:1467301-1484161 Sample_02_0578 Blood MOLM-13_sgSIK3e4 182 3 647 108 3 20 177 CLCN7,C16ORF91,PTX4,TMEM204,TELO2,CCDC154
SE_02_057700255 chr16:1467317-1484067 Sample_02_0577 Blood MOLM13_empty 255 4 645 108 3 20 177 CLCN7,C16ORF91,PTX4,TMEM204,TELO2,CCDC154
SE_02_080800916 chr16:1467358-1475001 Sample_02_0808 Ovary RMG1_ARID1A KO 916 1 315 54 1 14 106 CLCN7,C16ORF91,CCDC154,TELO2,PTX4
SE_02_033200597 chr16:1467385-1484553 Sample_02_0332 Haematopoietic and lymphoid tissue MOLM14_DMSO_9 597 2 659 112 3 20 177 CLCN7,C16ORF91,PTX4,TMEM204,TELO2,CCDC154
SE_02_099500438 chr16:1467810-1483875 Sample_02_0995 Blood MOLM-13_empty vector 438 6 623 106 2 20 177 CLCN7,C16ORF91,PTX4,TMEM204,TELO2,CCDC154
SE_02_057400224 chr16:1467960-1483991 Sample_02_0574 Blood MOLM-13_sgNeg2 224 3 627 105 2 20 177 CLCN7,C16ORF91,PTX4,TMEM204,TELO2,CCDC154
SE_02_046300513 chr16:1467964-1483884 Sample_02_0463 Blood OCI-AML3 cells 513 7 620 105 2 20 177 CLCN7,C16ORF91,PTX4,TMEM204,TELO2,CCDC154
SE_02_099400376 chr16:1467985-1484091 Sample_02_0994 Blood MOLM13_SIK3TQ 376 4 628 105 2 20 177 CLCN7,C16ORF91,PTX4,TMEM204,TELO2,CCDC154
SE_02_057500225 chr16:1468068-1484436 Sample_02_0575 Blood MOLM13_sgLKB1e2 225 2 633 107 2 20 177 CLCN7,C16ORF91,PTX4,TMEM204,TELO2,CCDC154
SE_02_099300394 chr16:1468093-1483922 Sample_02_0993 Blood MOLM-13_empty 394 4 614 104 2 20 177 CLCN7,C16ORF91,PTX4,TMEM204,TELO2,CCDC154
SE_02_045900639 chr16:1468150-1473520 Sample_02_0459 Blood ME-1_DMSO_6h 639 2 238 41 0 9 0 CLCN7,C16ORF91,CCDC154,TELO2,PTX4
SE_02_134600132 chr16:1468244-1475950 Sample_02_1346 Leukophereses leukophereses_p400 132 1 313 53 0 19 177 CLCN7,C16ORF91,CCDC154,TELO2,PTX4
SE_02_134100329 chr16:1468343-1484212 Sample_02_1341 Blood MV411 329 3 614 103 2 20 177 CLCN7,C16ORF91,PTX4,TMEM204,TELO2,CCDC154
SE_02_068200352 chr16:1468811-1473314 Sample_02_0682 Blood Kasumi-1 352 2 184 33 0 9 0 CLCN7,C16ORF91,CCDC154,TELO2,PTX4
SE_00_000600413 chr16:1468813-1493634 Sample_00_0006 Blood CD14-positive-monocyte 413 7 960 162 3 50 950 CLCN7,TELO2,PTX4,C16ORF91,TMEM204,CCDC154
SE_02_046100217 chr16:1468822-1484091 Sample_02_0461 Blood MV-4-11-B cells 217 4 580 99 2 20 177 CLCN7,C16ORF91,PTX4,TMEM204,TELO2,CCDC154
SE_02_033700338 chr16:1469027-1484483 Sample_02_0337 Haematopoietic and lymphoid tissue MV411_untreat 338 2 582 99 2 20 177 CLCN7,C16ORF91,PTX4,TMEM204,TELO2,CCDC154
SE_02_134900061 chr16:1469070-1491738 Sample_02_1349 Leukophereses leukophereses_p411 61 4 894 150 3 50 817 CLCN7,PTX4,C16ORF91,TMEM204,TELO2,CCDC154
SE_02_102800395 chr16:1469134-1473339 Sample_02_1028 Blood HL-60_WT 395 1 169 29 0 9 0 CLCN7,C16ORF91,CCDC154,TELO2,PTX4
SE_02_134700117 chr16:1469270-1483893 Sample_02_1347 Leukophereses leukophereses_p401 117 2 555 95 2 20 177 CLCN7,C16ORF91,PTX4,TMEM204,TELO2,CCDC154
SE_02_034700359 chr16:1469349-1475979 Sample_02_0347 Blood AML11 359 1 259 45 0 19 177 CLCN7,PTX4,C16ORF91,CCDC154,TELO2
SE_02_126200368 chr16:1471062-1483347 Sample_02_1262 Bone Im-GCT-3504_G34W 368 2 457 86 2 14 177 CLCN7,TMEM204,CCDC154,TELO2,PTX4
Genomic distribution of SEs associated with CLCN7
Genome Browser

The strength of the tissue affected by the gene

Expression of CLCN7

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)