Gene overview

Strategies/Algorithm: overlap Ensembl ID: ENSG00000217555
Gene: CKLF Gene type: protein_coding
Strand: + External links:
Genomic region: chr16:66552563-66566251 Genome Browser:

Super-enhancer search result of gene-based

SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_144500224 chr16:66484607-66556469 Sample_02_1445 Adipose SW872_TAZ4SA 224 16 1849 174 3 53 1861 CKLF,TK2,CKLF-CMTM1,BEAN1,CMTM3,CMTM1,CMTM2,BEAN1-AS1
SE_01_008100775 chr16:66502082-66553401 Sample_01_0081 Right atrium auricular region right-atrium-auricular-region 775 8 1318 130 2 50 1659 CKLF,TK2,CMTM1,CMTM2
SE_02_119100101 chr16:66502584-66553797 Sample_02_1191 Brain GBM25 101 9 1309 128 2 52 1659 CKLF-CMTM1,TK2,CKLF,CMTM1,CMTM2,BEAN1-AS1
SE_02_119500166 chr16:66502605-66553395 Sample_02_1195 Brain GBM29 166 14 1307 128 2 50 1659 CKLF-CMTM1,TK2,CKLF,CMTM1,CMTM2,BEAN1-AS1
SE_02_082600027 chr16:66506289-66563241 Sample_02_0826 Stomach gastric tumor 27 39 1396 141 2 61 1738 CKLF-CMTM1,TK2,CKLF,CMTM3,CMTM1,CMTM2,BEAN1-AS1
SE_01_007900332 chr16:66507920-66554451 Sample_01_0079 Peyers patch Peyers-patch 332 7 1198 121 2 52 1645 CKLF,TK2,CMTM3,CMTM1,CMTM2
SE_02_153000059 chr16:66508217-66561976 Sample_02_1530 Peripheral blood neutrophils_0BA0X 59 19 1321 135 2 56 1674 CKLF-CMTM1,TK2,CKLF,CMTM3,CMTM1,CMTM2,BEAN1-AS1,BEAN1
SE_02_133000171 chr16:66508993-66554941 Sample_02_1330 Blood AMU-AML1 171 14 1190 123 2 52 1496 CKLF-CMTM1,TK2,CKLF,CMTM3,CMTM1,CMTM2,BEAN1-AS1
SE_02_104900230 chr16:66509065-66563085 Sample_02_1049 Peripheral blood CD4+ cell_ROMI 230 41 1324 137 1 57 1547 CKLF-CMTM1,TK2,CKLF,CMTM3,CMTM1,CMTM2,BEAN1-AS1
SE_02_153100039 chr16:66510235-66560502 Sample_02_1531 Peripheral blood neutrophils_0B9ZK 39 12 1250 130 1 55 1343 CKLF-CMTM1,TK2,CKLF,CMTM3,CMTM1,CMTM2,BEAN1-AS1,BEAN1
SE_02_131800023 chr16:66510820-66557605 Sample_02_1318 Brain hMGLs_SORL1-A528T 23 13 1195 123 1 48 1203 CKLF-CMTM1,TK2,CKLF,CMTM3,CMTM1,CMTM2,BEAN1-AS1
SE_02_131500032 chr16:66510945-66555413 Sample_02_1315 Brain hMGLs_INPP5D SNP 32 12 1155 119 1 48 1190 CKLF-CMTM1,TK2,CKLF,CMTM3,CMTM1,CMTM2,BEAN1-AS1
SE_02_152900053 chr16:66510972-66562194 Sample_02_1529 Peripheral blood neutrophils_0BC75 53 11 1265 131 1 52 1240 CKLF-CMTM1,TK2,CKLF,CMTM3,CMTM1,CMTM2,BEAN1-AS1,BEAN1
SE_02_131600022 chr16:66510974-66555183 Sample_02_1316 Brain hMGLs_TREM2-R47H 22 12 1151 119 1 48 1187 CKLF-CMTM1,TK2,CKLF,CMTM3,CMTM1,CMTM2,BEAN1-AS1
SE_02_131300022 chr16:66510987-66559480 Sample_02_1313 Brain hMGLs_CD33_SNP 22 18 1220 128 1 52 1240 CKLF-CMTM1,TK2,CKLF,CMTM3,CMTM1,CMTM2,BEAN1-AS1
SE_02_131400023 chr16:66510988-66560381 Sample_02_1314 Brain hMGLs_TREM2-KO 23 13 1233 130 1 52 1240 CKLF-CMTM1,TK2,CKLF,CMTM3,CMTM1,CMTM2,BEAN1-AS1
SE_02_104800375 chr16:66511489-66557464 Sample_02_1048 Peripheral blood CD4+ cell_UNTREATED 375 20 1181 122 1 47 1101 CKLF-CMTM1,TK2,CKLF,CMTM3,CMTM1,CMTM2,BEAN1-AS1
SE_02_024700194 chr16:66512005-66565923 Sample_02_0247 Haematopoietic and lymphoid tissue MOLT4_2 194 6 1316 140 2 63 1137 CKLF,TK2,CMTM3,CMTM2,CMTM1
SE_01_005200076 chr16:66512783-66556796 Sample_01_0052 Blood neutrophil 76 5 1137 119 1 44 991 CKLF,TK2,CMTM3,CMTM2,CMTM1
SE_02_045400097 chr16:66512790-66563967 Sample_02_0454 Th17 lymphocytes Th17-IL-10+ Day 0 97 10 1253 131 1 56 1081 CKLF-CMTM1,TK2,CKLF,CMTM3,CMTM1,CMTM2,BEAN1-AS1
SE_02_045600134 chr16:66512966-66563253 Sample_02_0456 Th17 lymphocytes Th17-IL-10- Day 0 134 14 1235 130 1 53 1071 CKLF-CMTM1,TK2,CKLF,CMTM3,CMTM1,CMTM2,BEAN1-AS1
SE_02_092700148 chr16:66513090-66561281 Sample_02_0927 Peripheral blood neutrophils_US 148 10 1198 124 1 48 1044 CKLF-CMTM1,TK2,CKLF,CMTM3,CMTM1,CMTM2,BEAN1-AS1,BEAN1
SE_02_092800517 chr16:66513098-66556625 Sample_02_0928 Peripheral blood neutrophils_Ecoli 517 8 1121 115 1 44 991 CKLF-CMTM1,TK2,CKLF,CMTM3,CMTM1,CMTM2,BEAN1-AS1,BEAN1
SE_02_012600453 chr16:66515006-66554980 Sample_02_0126 Blood Induced-regulatory-T-cells_DMSO 453 6 1034 108 1 39 913 CKLF,TK2,CMTM3,CMTM2,CMTM1
SE_02_045500111 chr16:66515225-66563343 Sample_02_0455 Th17 lymphocytes Th17-IL-10+ Day 5 111 11 1170 121 1 50 996 CKLF-CMTM1,TK2,CKLF,CMTM3,CMTM1,CMTM2,BEAN1-AS1
SE_02_131200024 chr16:66515316-66555745 Sample_02_1312 Brain hMGLs_WT 24 8 1040 106 1 39 913 CKLF-CMTM1,TK2,CKLF,CMTM3,CMTM1,CMTM2,BEAN1-AS1
SE_02_022600490 chr16:66515321-66563704 Sample_02_0226 Blood KOPTK1 490 6 1175 121 1 50 1003 CKLF,TK2,CMTM3,CMTM2,CMTM1
SE_02_075800095 chr16:66515365-66553577 Sample_02_0758 Peripheral blood REH 95 10 992 101 1 39 913 CKLF-CMTM1,TK2,CKLF,CMTM1,CMTM2,BEAN1-AS1
SE_02_050100110 chr16:66515432-66553539 Sample_02_0501 Blood HL-60_CTRL 110 8 990 100 1 39 913 CKLF-CMTM1,TK2,CKLF,CMTM1,CMTM2,BEAN1-AS1
SE_01_002500264 chr16:66516125-66561974 Sample_01_0025 Haematopoietic and lymphoid tissue blood DND-41 264 8 1125 116 1 42 966 CKLF,TK2,CMTM3,CMTM2,CMTM1
SE_02_022500075 chr16:66519454-66565999 Sample_02_0225 Haematopoietic and lymphoid tissue PF-382 75 4 1118 120 2 47 875 CKLF,TK2,CMTM3,CMTM2,CMTM1
SE_02_103500967 chr16:66539267-66555281 Sample_02_1035 Mammary gland HCC70_Vehicle 967 3 423 51 1 14 564 CKLF-CMTM1,TK2,CKLF,CMTM3,CMTM1,CMTM2
SE_02_121600049 chr16:66539433-66564345 Sample_02_1216 Blood Jurkat ZBTB1 KO 49 2 569 66 1 28 654 CKLF-CMTM1,TK2,CKLF,CMTM3,CMTM1,CMTM2
SE_02_005800280 chr16:66539495-66564544 Sample_02_0058 Haematopoietic and lymphoid tissue blood WT/Jurkat-11bp 280 3 574 67 1 28 654 CKLF,TK2,CMTM3,CMTM2,CMTM1
SE_02_003100446 chr16:66539496-66566139 Sample_02_0031 Haematopoietic and lymphoid tissue blood Jurkat 446 3 613 72 2 31 693 CKLF,TK2,CMTM3,CMTM2,CMTM1
SE_02_005900216 chr16:66539498-66565566 Sample_02_0059 Haematopoietic and lymphoid tissue blood WT/Jurkat 216 2 599 69 1 28 654 CKLF,TK2,CMTM3,CMTM2,CMTM1
SE_02_022100310 chr16:66539548-66565782 Sample_02_0221 Blood CCRF-CEM 310 4 604 70 1 29 658 CKLF,TK2,CMTM3,CMTM2,CMTM1
SE_02_121700049 chr16:66539549-66564599 Sample_02_1217 Blood Jurkat ZBTB1 KO_ZBTB1_expressing FLAG-ZBTB1_Asparagine deprivation 49 2 575 67 1 28 654 CKLF-CMTM1,TK2,CKLF,CMTM3,CMTM1,CMTM2
SE_02_121400051 chr16:66539848-66564346 Sample_02_1214 Blood Jurkat ZBTB1 KO_ZBTB1_expressing FLAG-ZBTB1 51 4 559 63 1 25 654 CKLF-CMTM1,TK2,CKLF,CMTM3,CMTM1,CMTM2
SE_02_083700649 chr16:66542211-66555493 Sample_02_0837 Bone marrow TEX-Luciferase-Rx_cells 649 1 367 43 1 9 508 CKLF-CMTM1,TK2,CKLF,CMTM3,CMTM1,CMTM2
SE_02_104701106 chr16:66542950-66557496 Sample_02_1047 Peripheral blood CD4+ cells_CTCL1181 1106 3 386 44 1 9 508 CKLF-CMTM1,TK2,CKLF,CMTM3,CMTM1,CMTM2
SE_02_036200330 chr16:66542991-66554503 Sample_02_0362 Haematopoietic and lymphoid tissue REH 330 2 321 37 1 9 508 CKLF,TK2,CMTM3,CMTM1,CMTM2
SE_02_036300680 chr16:66543012-66554156 Sample_02_0363 Haematopoietic and lymphoid tissue 697 680 2 311 36 1 9 508 CKLF,TK2,CMTM1,CMTM2,CMTM3
SE_02_061701055 chr16:66543430-66563665 Sample_02_0617 HSPC FL CD34+CD38-/lowCD90+ HSPC 1055 5 473 55 1 20 598 CKLF-CMTM1,TK2,CKLF,CMTM3,CMTM1,CMTM2
SE_02_134500583 chr16:66543606-66561190 Sample_02_1345 Leukophereses leukophereses_p358 583 13 426 50 1 13 561 CKLF-CMTM1,TK2,CKLF,CMTM3,CMTM1,CMTM2
SE_00_005501026 chr16:66544427-66554987 Sample_00_0055 Spleen spleen 34y 1026 2 299 36 1 9 508 CKLF-CMTM1,TK2,CKLF,CMTM3,CMTM1,CMTM2
SE_02_017600987 chr16:66545955-66554645 Sample_02_0176 Peripheral blood LOUCY 987 1 251 28 1 9 508 CKLF,TK2,CMTM3,CMTM1,CMTM2
SE_02_083500948 chr16:66546627-66554839 Sample_02_0835 Bone marrow TEX-HIST1H3H-K27M-Rx_cells 948 1 244 25 1 9 508 CKLF-CMTM1,TK2,CKLF,CMTM3,CMTM1,CMTM2
SE_02_111200839 chr16:66546686-66554082 Sample_02_1112 T lymphocyte THP-6 T-ALL 839 1 220 23 1 9 508 CKLF-CMTM1,TK2,CKLF,CMTM1,CMTM2,CMTM3
SE_01_008401374 chr16:66546779-66554979 Sample_01_0084 Spleen spleen 1374 1 245 26 1 9 508 CKLF,TK2,CMTM3,CMTM2,CMTM1
SE_02_050200224 chr16:66546857-66556715 Sample_02_0502 Blood HL-60_PMA_16h 224 1 276 30 1 9 508 CKLF-CMTM1,TK2,CKLF,CMTM3,CMTM1,CMTM2
SE_02_083600976 chr16:66547027-66555281 Sample_02_0836 Bone marrow TEX-HIST1H3H-WT-Rx_cells 976 1 244 26 1 9 508 CKLF-CMTM1,TK2,CKLF,CMTM3,CMTM1,CMTM2
SE_02_155600436 chr16:66547296-66557366 Sample_02_1556 Gastrointestinal Stromal GIST-5_KIT e9 436 3 273 27 1 9 508 CKLF-CMTM1,TK2,CKLF,CMTM3,CMTM1,CMTM2
SE_02_083300830 chr16:66547314-66555023 Sample_02_0833 Bone marrow TEX-HIST1H3F-K27I-2-Rx_cells 830 1 228 23 1 9 508 CKLF-CMTM1,TK2,CKLF,CMTM3,CMTM1,CMTM2
SE_02_034900517 chr16:66547675-66563786 Sample_02_0349 Peripheral blood CUTLL1_dimer-mutant 517 2 369 38 1 21 598 CKLF,TK2,CMTM3,CMTM2,CMTM1
SE_02_022200340 chr16:66547914-66566315 Sample_02_0222 Blood DU-528 340 1 413 44 2 26 661 CKLF,TK2,CMTM3,CMTM2,CMTM1
SE_02_006000188 chr16:66547950-66566075 Sample_02_0060 Haematopoietic and lymphoid tissue blood WT-11bp/Jurkat 188 1 407 44 2 26 614 CKLF,TK2,CMTM3,CMTM2,CMTM1
SE_01_010401100 chr16:66547953-66554286 Sample_01_0104 Lung upper lobe of left lung 1100 1 188 19 1 9 487 CKLF-CMTM1,TK2,CKLF,CMTM1,CMTM2,CMTM3,AC132186.1
SE_02_121500047 chr16:66548464-66564779 Sample_02_1215 Blood Jurkat ZBTB1 KO_Asparagine deprivation 47 1 371 38 1 23 539 CKLF-CMTM1,TK2,CKLF,CMTM3,CMTM1,CMTM2
SE_02_081601583 chr16:66548484-66554037 Sample_02_0816 Ovary Clear cell ovarian cancer 1583 1 167 15 1 9 449 CKLF-CMTM1,TK2,CKLF,CMTM1,CMTM2,CMTM3

Genomic distribution of SEs associated with CKLF

The strength of the tissue affected by the gene


Expression of CKLF