SEdb 2.0
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Gene overview

Strategies/Algorithm: overlap Ensembl ID: ENSG00000186567
Gene: CEACAM19 Gene type: protein_coding
Strand: + External links:
Genomic region: chr19:44662278-44684359 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_147000815 chr19:44648026-44695908 Sample_02_1470 Umbilical Vein H441 815 9 1367 115 3 34 2333 MIR4531,PVR,CEACAM19,IGSF23,CEACAM16
SE_02_071300994 chr19:44665420-44696524 Sample_02_0713 Pancreas BxPC3_sgTP63 994 6 886 79 2 24 1163 PVR,CEACAM19,MIR4531,CEACAM16
SE_02_136600874 chr19:44666302-44696224 Sample_02_1366 Pancreas BxPC3-untreated 874 7 860 75 2 24 1026 CEACAM19,MIR4531,PVR,CEACAM16
SE_02_125400602 chr19:44666356-44696176 Sample_02_1254 Bladder Bladder tumor Basal1 602 6 858 74 2 24 1023 CEACAM19,MIR4531,PVR,CEACAM16
SE_02_082700267 chr19:44666796-44696974 Sample_02_0827 Stomach normal gastric 267 7 864 79 2 24 1023 CEACAM19,MIR4531,PVR,CEACAM16
SE_02_115100097 chr19:44674013-44756794 Sample_02_1151 Mammary gland MCF-7_UNTR 97 51 2372 180 33 280 2137 CEACAM16,BCL3,CEACAM19,MIR8085,MIR4531,PVR,CBLC
SE_04_001000230 chr19:44676338-44696231 Sample_04_0010 Lung A549 TGFb 230 4 627 60 2 16 679 CEACAM19,MIR4531,PVR,CEACAM16
SE_03_001300812 chr19:44676415-44699352 Sample_03_0013 Lung A549 812 2 727 68 4 24 700 CEACAM19,CEACAM16,PVR,BCL3
SE_04_000900170 chr19:44676511-44698262 Sample_04_0009 Lung A549 170 2 700 66 2 20 648 CEACAM19,MIR4531,PVR,CEACAM16
SE_04_000700194 chr19:44676696-44695807 Sample_04_0007 Lung A549 FOXA2 shRNA2 194 7 609 58 2 16 640 CEACAM19,MIR4531,PVR,CEACAM16
SE_02_099100843 chr19:44676752-44693222 Sample_02_0991 Breast cancer cell line lung metastatic variant MDA-MB-231 LM2 843 6 536 53 2 16 640 CEACAM19,MIR4531,PVR,CEACAM16
SE_02_122800823 chr19:44676775-44695925 Sample_02_1228 Mammary gland MDA-MB-231_2 823 8 612 59 2 16 640 CEACAM19,MIR4531,PVR,CEACAM16
SE_02_023700767 chr19:44676812-44701824 Sample_02_0237 Colon V389 767 8 798 71 5 41 834 CEACAM19,CEACAM16,PVR,BCL3
SE_02_047401344 chr19:44676893-44692705 Sample_02_0474 Fibroblast umbilical cord Fibroblast 1344 4 515 50 2 16 640 CEACAM19,MIR4531,PVR,CEACAM16
SE_04_000800197 chr19:44676923-44695967 Sample_04_0008 Lung A549 shRNA control 197 8 611 59 2 16 640 CEACAM19,MIR4531,PVR,CEACAM16
SE_02_071201111 chr19:44676977-44696198 Sample_02_0712 Pancreas BxPC3_sgNEG 1111 5 615 59 2 16 640 CEACAM19,MIR4531,PVR,CEACAM16
SE_02_047501001 chr19:44677006-44696518 Sample_02_0475 Induced hepatocyte-like cells hepatocyte-like cells 1001 4 625 62 2 16 640 CEACAM19,MIR4531,PVR,CEACAM16
SE_02_105400514 chr19:44677015-44696512 Sample_02_1054 Esophagus SKGT4 514 10 624 62 2 16 640 CEACAM19,MIR4531,PVR,CEACAM16
SE_04_000600204 chr19:44677026-44695962 Sample_04_0006 Lung A549 GFP control 204 6 608 59 2 16 640 CEACAM19,MIR4531,PVR,CEACAM16
SE_04_000300227 chr19:44677062-44695514 Sample_04_0003 Lung A549 TEAD4 shRNA TGFb 227 7 594 57 2 16 640 CEACAM19,MIR4531,PVR,CEACAM16
SE_02_029400927 chr19:44677072-44698856 Sample_02_0294 Pancreatic L3-6_DMSO 927 6 705 68 4 23 640 CEACAM19,CEACAM16,PVR,BCL3
SE_02_070700792 chr19:44677179-44696080 Sample_02_0707 Pancreas BxPC3 WT 792 8 605 59 2 16 640 CEACAM19,MIR4531,PVR,CEACAM16
SE_02_083200569 chr19:44677234-44696007 Sample_02_0832 Umblical vein HUVECs_TNF30min 569 9 601 59 2 16 640 CEACAM19,MIR4531,PVR,CEACAM16,ZNF180,BCL3,CBLC
SE_02_099000524 chr19:44677272-44696125 Sample_02_0990 Breast cancer brain metastatic variant MDA-MB-231 BrM2 524 5 600 59 2 16 640 CEACAM19,MIR4531,PVR,CEACAM16
SE_02_082600852 chr19:44677678-44696974 Sample_02_0826 Stomach gastric tumor 852 17 620 64 2 16 640 CEACAM19,MIR4531,PVR,CEACAM16
SE_02_024200494 chr19:44680451-44702132 Sample_02_0242 Colon V481 494 5 688 68 5 41 690 CEACAM19,CEACAM16,PVR,BCL3
SE_02_047700651 chr19:44680803-44701559 Sample_02_0477 Colon intestinal epithelial organoids_139a 651 10 664 66 5 41 645 CEACAM16,CEACAM19,BCL3,MIR4531,PVR
SE_02_024000840 chr19:44680829-44697214 Sample_02_0240 Colon V429_2 840 7 519 59 2 16 483 CEACAM19,CEACAM16,PVR
SE_02_002100780 chr19:44681728-44698158 Sample_02_0021 Colon V429 780 5 535 60 2 17 398 CEACAM19,CEACAM16,PVR
SE_03_001500673 chr19:44682037-44698962 Sample_03_0015 Lung A549_dexamethasone_8h 673 3 547 62 4 21 398 CEACAM19,CEACAM16,PVR,BCL3
SE_02_087200142 chr19:44682411-44725309 Sample_02_0872 Colon HCT116_siCtrl-5FU 142 13 1320 110 11 127 1316 CEACAM16,CEACAM19,BCL3,MIR8085,MIR4531,PVR
SE_02_087400389 chr19:44682542-44703642 Sample_02_0874 Colon HCT116_siGLIS2.2-5FU 389 7 682 67 7 41 648 CEACAM16,CEACAM19,BCL3,MIR4531,PVR
SE_02_036100449 chr19:44682794-44698033 Sample_02_0361 Colon HT29_DMSO 449 3 501 60 2 14 283 CEACAM19,CEACAM16,PVR
SE_02_040700253 chr19:44682923-44724664 Sample_02_0407 Brain BT16 253 9 1289 109 11 123 1208 CEACAM19,CEACAM16,PVR,BCL3
SE_02_151900090 chr19:44683423-44726993 Sample_02_1519 Umbilical vein HUVEC_Scr_IL1beta 90 22 1337 110 11 129 1182 CEACAM16,CEACAM19,BCL3,MIR8085,MIR4531,PVR,ZNF180,CBLC
SE_02_152000336 chr19:44683490-44695992 Sample_02_1520 Umbilical vein HUVEC_Notch1kd_IL1beta 336 13 410 53 2 4 232 CEACAM19,MIR4531,PVR,CEACAM16,ZNF180,BCL3,CBLC
SE_02_087300202 chr19:44683519-44718721 Sample_02_0873 Colon HCT116_siGLIS2.1-5FU 202 7 1107 103 8 94 1151 CEACAM16,CEACAM19,BCL3,MIR8085,MIR4531,PVR
SE_01_007100419 chr19:44683556-44698908 Sample_01_0071 Pancreas body-of-pancreas 419 5 507 62 4 12 213 CEACAM19,CEACAM16,PVR,BCL3
SE_02_146400279 chr19:44683861-44734956 Sample_02_1464 Ovary CAOV4 279 8 1544 133 21 123 1067 CEACAM16,CEACAM19,BCL3,MIR8085,MIR4531,PVR,CBLC
SE_02_122700584 chr19:44683919-44726022 Sample_02_1227 Bone marrow U266 584 14 1299 108 11 123 1055 CEACAM16,CEACAM19,BCL3,MIR8085,MIR4531,PVR
Genomic distribution of SEs associated with CEACAM19
Genome Browser

The strength of the tissue affected by the gene

Expression of CEACAM19

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)