SEdb 2.0
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Gene overview

Strategies/Algorithm: overlap Ensembl ID: ENSG00000213892
Gene: CEACAM16 Gene type: protein_coding
Strand: + External links:
Genomic region: chr19:44699151-44710718 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_115100097 chr19:44674013-44756794 Sample_02_1151 Mammary gland MCF-7_UNTR 97 51 2372 180 33 280 2137 CEACAM16,BCL3,CEACAM19,MIR8085,MIR4531,PVR,CBLC
SE_03_001300812 chr19:44676415-44699352 Sample_03_0013 Lung A549 812 2 727 68 4 24 700 CEACAM19,CEACAM16,PVR,BCL3
SE_02_023700767 chr19:44676812-44701824 Sample_02_0237 Colon V389 767 8 798 71 5 41 834 CEACAM19,CEACAM16,PVR,BCL3
SE_02_024200494 chr19:44680451-44702132 Sample_02_0242 Colon V481 494 5 688 68 5 41 690 CEACAM19,CEACAM16,PVR,BCL3
SE_02_047700651 chr19:44680803-44701559 Sample_02_0477 Colon intestinal epithelial organoids_139a 651 10 664 66 5 41 645 CEACAM16,CEACAM19,BCL3,MIR4531,PVR
SE_02_087200142 chr19:44682411-44725309 Sample_02_0872 Colon HCT116_siCtrl-5FU 142 13 1320 110 11 127 1316 CEACAM16,CEACAM19,BCL3,MIR8085,MIR4531,PVR
SE_02_087400389 chr19:44682542-44703642 Sample_02_0874 Colon HCT116_siGLIS2.2-5FU 389 7 682 67 7 41 648 CEACAM16,CEACAM19,BCL3,MIR4531,PVR
SE_02_040700253 chr19:44682923-44724664 Sample_02_0407 Brain BT16 253 9 1289 109 11 123 1208 CEACAM19,CEACAM16,PVR,BCL3
SE_02_151900090 chr19:44683423-44726993 Sample_02_1519 Umbilical vein HUVEC_Scr_IL1beta 90 22 1337 110 11 129 1182 CEACAM16,CEACAM19,BCL3,MIR8085,MIR4531,PVR,ZNF180,CBLC
SE_02_087300202 chr19:44683519-44718721 Sample_02_0873 Colon HCT116_siGLIS2.1-5FU 202 7 1107 103 8 94 1151 CEACAM16,CEACAM19,BCL3,MIR8085,MIR4531,PVR
SE_02_146400279 chr19:44683861-44734956 Sample_02_1464 Ovary CAOV4 279 8 1544 133 21 123 1067 CEACAM16,CEACAM19,BCL3,MIR8085,MIR4531,PVR,CBLC
SE_02_122700584 chr19:44683919-44726022 Sample_02_1227 Bone marrow U266 584 14 1299 108 11 123 1055 CEACAM16,CEACAM19,BCL3,MIR8085,MIR4531,PVR
SE_02_041000288 chr19:44684781-44724651 Sample_02_0410 Brain BT16_NoDox 288 7 1230 106 11 117 926 CEACAM16,PVR,BCL3,CEACAM19
SE_02_068700672 chr19:44688614-44702031 Sample_02_0687 Lung NCI-H146_no infection 672 5 405 36 3 29 194 CEACAM16,BCL3,MIR4531,PVR,CEACAM19
SE_02_028600001 chr19:44688774-44770952 Sample_02_0286 Liver HuH7_IL-1alpha_1h 1 11 2351 164 33 321 2141 CEACAM16,BCL3,BCAM,CEACAM19,CBLC,PVR
SE_02_081000087 chr19:44689359-44756414 Sample_02_0810 Mammary gland T47D noSerum 87 27 1887 142 31 265 1365 CEACAM16,BCL3,MIR8085,MIR4531,PVR,CEACAM19,CBLC
SE_02_080900095 chr19:44689444-44755151 Sample_02_0809 Mammary gland T47D Serum 95 13 1862 141 31 262 1279 CEACAM16,BCL3,MIR8085,MIR4531,PVR,CEACAM19,CBLC
SE_02_104300611 chr19:44709690-44762508 Sample_02_1043 Peripheral blood Peripheral blood cells_CTCL1200 611 27 1463 113 26 228 1366 CEACAM16,MIR8085,BCL3,BCAM,CEACAM19,CBLC
SE_02_083200403 chr19:44710045-44725872 Sample_02_0832 Umblical vein HUVECs_TNF30min 403 11 467 39 3 37 151 CEACAM16,BCL3,MIR8085,CEACAM19
SE_02_083100764 chr19:44710091-44724425 Sample_02_0831 Umblical vein HUVECs_TNF0min 764 16 416 37 2 31 151 CEACAM16,BCL3,MIR8085,CEACAM19
SE_02_065900190 chr19:44710126-44775012 Sample_02_0659 Lung H23 190 19 1805 124 27 235 1366 CEACAM16,MIR8085,BCL3,BCAM,CEACAM19,CBLC
SE_01_008400277 chr19:44710434-44771375 Sample_01_0084 Spleen spleen 277 13 1703 123 27 235 1322 CEACAM16,BCL3,CBLC,CEACAM19,BCAM
SE_02_152000488 chr19:44710582-44724758 Sample_02_1520 Umbilical vein HUVEC_Notch1kd_IL1beta 488 10 414 37 3 31 73 CEACAM16,BCL3,MIR8085,CEACAM19
SE_02_058500908 chr19:44710584-44724770 Sample_02_0585 Umbilical vein HUVEC 0hour 908 6 415 37 3 31 73 CEACAM16,BCL3,MIR8085,CEACAM19
Genomic distribution of SEs associated with CEACAM16
Genome Browser

The strength of the tissue affected by the gene

Expression of CEACAM16

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)