SEdb 2.0
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  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: overlap Ensembl ID: ENSG00000100147
Gene: CCDC134 Gene type: protein_coding
Strand: + External links:
Genomic region: chr22:41800679-41832164 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_108301141 chr22:41774614-41802200 Sample_02_1083 Macula macula 1141 9 659 100 2 69 959 MEI1,CCDC134,SREBF2
SE_02_104300166 chr22:41779935-41873878 Sample_02_1043 Peripheral blood Peripheral blood cells_CTCL1200 166 50 2352 283 7 228 1921 MEI1,CCDC134,SREBF2,MIR33A,MIR378I,SHISA8
SE_02_138700487 chr22:41798619-41865812 Sample_02_1387 Peripheral blood Mac-1_ALK- 487 25 1697 192 4 125 1025 MEI1,CCDC134,SREBF2,MIR33A,SHISA8
SE_02_037800151 chr22:41798659-41847271 Sample_02_0378 Skeletal muscle SCMC 151 6 1236 136 4 117 1025 MEI1,SREBF2,CCDC134
SE_02_080800659 chr22:41802445-41863161 Sample_02_0808 Ovary RMG1_ARID1A KO 659 38 1552 170 4 115 834 CCDC134,SREBF2,MIR33A
SE_02_141300437 chr22:41804597-41846525 Sample_02_1413 Muscle RH4_sgBRG1 437 15 1055 108 4 107 834 CCDC134,SREBF2
SE_02_146700269 chr22:41807152-41870973 Sample_02_1467 Blood HUDEP-2_LRFKO 269 15 1575 167 4 161 1052 CCDC134,SREBF2,MIR33A,SHISA8
SE_01_006900085 chr22:41812810-41921201 Sample_01_0069 Adrenal gland adrenal-gland 85 24 2800 322 7 424 3505 SREBF2,MIR33A,CCDC134,TNFRSF13C,CENPM,LOC339674
SE_02_037000664 chr22:41812877-41847300 Sample_02_0370 Skeletal muscle RH4 664 5 846 94 4 91 618 SREBF2,CCDC134
SE_02_074000427 chr22:41813319-41832936 Sample_02_0740 Muscle RH3 427 9 489 55 2 19 403 CCDC134,SREBF2
SE_02_111101132 chr22:41813469-41860876 Sample_02_1111 Other HGrC1_SMAD2/3KO 1132 16 1176 138 4 89 539 CCDC134,SREBF2,MIR33A
SE_02_143200781 chr22:41813801-41875962 Sample_02_1432 Bone A673 STAG2 WT 781 21 1544 173 5 170 950 CCDC134,SREBF2,MIR33A,MIR378I,SHISA8
SE_02_001900602 chr22:41814685-41847214 Sample_02_0019 Embryo Neural crest cells 602 9 796 91 4 84 440 SREBF2,CCDC134
SE_00_000300064 chr22:41815371-41863357 Sample_00_0003 Adrenal gland adrenal-gland_97d 64 9 1193 137 3 92 440 SREBF2,CCDC134,MIR33A
SE_02_093001507 chr22:41815410-41845274 Sample_02_0930 Mid-gestation placenta trophoblast__SynT 1507 13 737 84 2 83 440 CCDC134,SREBF2,SHISA8
SE_02_092900661 chr22:41815699-41844527 Sample_02_0929 Mid-gestation placenta trophoblast__CytT 661 10 709 81 2 82 440 CCDC134,SREBF2,SHISA8
SE_01_010600347 chr22:41816012-41827963 Sample_01_0106 Adrenal gland adrenal gland 54y 347 6 286 29 1 7 262 CCDC134,SREBF2
SE_02_122400711 chr22:41817121-41863463 Sample_02_1224 Bone marrow normal plasma cell 711 25 1146 133 3 92 440 CCDC134,SREBF2,MIR33A
SE_02_077500602 chr22:41817411-41867783 Sample_02_0775 Pancreas EndoC-BH1_SE 602 11 1238 143 3 104 550 CCDC134,SREBF2,MIR33A,SHISA8
SE_01_010800302 chr22:41817881-41827202 Sample_01_0108 Adrenal gland adrenal gland_37y 302 6 223 27 1 7 262 CCDC134,SREBF2
SE_02_030800433 chr22:41818366-41846375 Sample_02_0308 Neuroblastoma SJNB1 433 5 690 80 3 84 440 SREBF2,CCDC134
SE_02_031200358 chr22:41819998-41878383 Sample_02_0312 Neuroblastoma SK-N-BE_2-C 358 6 1445 160 4 183 1076 SREBF2,CCDC134,TNFRSF13C,MIR33A
SE_02_030400310 chr22:41820172-41847882 Sample_02_0304 Neuroblastoma N206 310 4 676 77 3 88 440 SREBF2,CCDC134
SE_02_108200334 chr22:41820278-41863169 Sample_02_1082 Retina retina 334 16 1080 124 3 92 440 CCDC134,SREBF2,MIR33A
SE_02_029600460 chr22:41820331-41837377 Sample_02_0296 Neuroblastoma CLB-BER-Lud 460 2 420 44 1 80 440 SREBF2,CCDC134
SE_02_147500678 chr22:41820392-41837109 Sample_02_1475 Bone CHLA-25 678 6 415 44 1 80 440 CCDC134,SREBF2
SE_02_054200218 chr22:41820398-41862912 Sample_02_0542 Brain Kelly_ResJQ1 218 8 1063 122 3 90 440 CCDC134,SREBF2,MIR33A
SE_02_055300402 chr22:41820551-41846541 Sample_02_0553 Other HSSY2 shCt 402 13 640 70 3 84 440 CCDC134,SREBF2
SE_02_097600263 chr22:41820643-41847425 Sample_02_0976 Brain H3.3K27M-KO_DIPGXIII-c5p5-Rx_R1_cells_h3k27ac 263 13 647 72 3 84 440 CCDC134,SREBF2
SE_02_096200481 chr22:41820707-41847280 Sample_02_0962 Brain H3.3K27M_Tumor-derived cell-line_DIPGXIIIp11_cells 481 11 644 72 3 84 440 CCDC134,SREBF2
SE_02_024200372 chr22:41821448-41858109 Sample_02_0242 Colon V481 372 6 901 110 3 88 440 SREBF2,CCDC134,MIR33A
SE_02_087501022 chr22:41821552-41873632 Sample_02_0875 Peripheral blood Peripheral blood-derived mast cells 1022 17 1276 147 4 146 707 CCDC134,SREBF2,MIR33A,MIR378I,SHISA8
SE_02_042100640 chr22:41821574-41835172 Sample_02_0421 Brain BE2C_3 640 4 331 36 1 79 440 SREBF2,CCDC134
SE_02_013200409 chr22:41821607-41866441 Sample_02_0132 Lung 1015_CL 409 8 1100 128 3 92 440 SREBF2,CCDC134,MIR33A
SE_02_012600377 chr22:41821607-41878322 Sample_02_0126 Blood Induced-regulatory-T-cells_DMSO 377 11 1392 155 4 183 1075 SREBF2,CCDC134,TNFRSF13C,MIR33A
SE_02_123500133 chr22:41821628-41877468 Sample_02_1235 Brain Neuroblastoma PDX tumour cells 133 17 1374 152 4 177 972 CCDC134,SREBF2,MIR378I,TNFRSF13C,SHISA8,MIR33A
SE_02_045400716 chr22:41821678-41865931 Sample_02_0454 Th17 lymphocytes Th17-IL-10+ Day 0 716 15 1079 127 3 92 440 CCDC134,SREBF2,MIR33A,SHISA8
SE_02_023700469 chr22:41821741-41865970 Sample_02_0237 Colon V389 469 15 1081 127 3 92 440 SREBF2,CCDC134,MIR33A
SE_02_051700318 chr22:41821999-41865588 Sample_02_0517 Esophagus TE5 318 27 1070 127 3 92 440 CCDC134,SREBF2,MIR33A,SHISA8
SE_02_050600320 chr22:41821999-41865589 Sample_02_0506 Esophagus TE5_1 320 27 1070 127 3 92 440 CCDC134,SREBF2,MIR33A,SHISA8
SE_02_023400629 chr22:41822018-41879487 Sample_02_0234 Tonsil Th17 629 13 1411 156 4 185 1137 SREBF2,CCDC134,TNFRSF13C,MIR33A
SE_02_108300313 chr22:41822125-41873759 Sample_02_1083 Macula macula 313 26 1275 147 4 146 727 CCDC134,SREBF2,MIR33A,MIR378I,SHISA8
SE_02_035500271 chr22:41822225-41865214 Sample_02_0355 Colon HCT15 271 7 1061 126 3 92 440 SREBF2,CCDC134,MIR33A
SE_02_024000596 chr22:41822331-41863132 Sample_02_0240 Colon V429_2 596 9 1023 120 3 90 440 SREBF2,CCDC134,MIR33A
SE_02_088400425 chr22:41822337-41859962 Sample_02_0884 Colon LoVo 425 9 931 113 3 88 440 CCDC134,SREBF2,MIR33A
SE_02_045500375 chr22:41822360-41866023 Sample_02_0455 Th17 lymphocytes Th17-IL-10+ Day 5 375 11 1073 127 3 92 440 CCDC134,SREBF2,MIR33A,SHISA8
SE_02_045600467 chr22:41822363-41873064 Sample_02_0456 Th17 lymphocytes Th17-IL-10- Day 0 467 16 1250 144 3 145 705 CCDC134,SREBF2,MIR33A,SHISA8
SE_02_050500461 chr22:41822420-41862767 Sample_02_0505 Esophagus KYSE70_1 461 24 1010 119 3 90 440 CCDC134,SREBF2,MIR33A
SE_02_051600457 chr22:41822420-41862767 Sample_02_0516 Esophagus KYSE70 457 25 1010 119 3 90 440 CCDC134,SREBF2,MIR33A
SE_02_076600882 chr22:41822460-41862765 Sample_02_0766 Ovary PEO1 882 14 1009 119 3 90 440 CCDC134,SREBF2,MIR33A
SE_02_088600958 chr22:41822463-41863356 Sample_02_0886 Skin foreskin_ p63KLF4 958 15 1026 120 3 92 440 CCDC134,SREBF2,MIR33A
SE_02_059401006 chr22:41822490-41863031 Sample_02_0594 iPSC-derived neural progenitors 1006 13 1014 119 3 90 440 CCDC134,SREBF2,MIR33A
SE_02_097200584 chr22:41822540-41835798 Sample_02_0972 Brain H3.3K27M-KO_BT245-D2p8-Rx_R1_cells 584 6 332 36 1 79 440 CCDC134,SREBF2
SE_02_129700395 chr22:41822548-41848610 Sample_02_1297 Lung lung 395 14 638 75 3 88 440 CCDC134,SREBF2
SE_02_136500725 chr22:41822566-41859268 Sample_02_1365 Pancreas AsPC1-untreated 725 10 911 111 3 88 440 CCDC134,SREBF2,MIR33A
SE_02_137100505 chr22:41822593-41862800 Sample_02_1371 Pancreas Patu899S-untreated 505 12 1009 119 3 90 440 CCDC134,SREBF2,MIR33A
SE_02_116800926 chr22:41822606-41859044 Sample_02_1168 Biliary H69_TGF Vehicle_2 926 16 907 110 3 88 440 CCDC134,SREBF2,MIR33A
SE_02_116700984 chr22:41822611-41859557 Sample_02_1167 Biliary H69_TGF Vehicle_1 984 15 916 111 3 88 440 CCDC134,SREBF2,MIR33A
SE_00_005600733 chr22:41822614-41873958 Sample_00_0056 Sigmoid colon sigmoid colon 3y 733 23 1270 146 4 156 763 CCDC134,SREBF2,MIR33A,MIR378I,SHISA8
SE_02_129900274 chr22:41822616-41853052 Sample_02_1299 Liver liver 274 20 753 93 3 88 440 CCDC134,SREBF2,MIR33A
SE_02_125300868 chr22:41822641-41865893 Sample_02_1253 Mammary gland CAMA1 ER+/FGFR1-amplified 868 17 1066 126 3 92 440 CCDC134,SREBF2,MIR33A,SHISA8
SE_02_146800465 chr22:41822782-41865670 Sample_02_1468 Blood HUDEP-2_WT 465 14 1058 126 3 92 440 CCDC134,SREBF2,MIR33A,SHISA8
SE_02_070300610 chr22:41823154-41859803 Sample_02_0703 Pancreas PATU8988S WT 610 10 915 110 2 88 440 CCDC134,SREBF2,MIR33A
SE_02_147000592 chr22:41823185-41862886 Sample_02_1470 Umbilical Vein H441 592 12 999 115 2 90 440 CCDC134,SREBF2,MIR33A
SE_01_010900530 chr22:41823207-41863398 Sample_01_0109 Colon transverse colon_54y 530 18 1015 116 2 92 440 CCDC134,SREBF2,MIR33A
SE_02_071100154 chr22:41823241-41859809 Sample_02_0711 Pancreas hN35_organoid 154 22 914 109 2 88 440 CCDC134,SREBF2,MIR33A
SE_02_047700371 chr22:41823246-41862956 Sample_02_0477 Colon intestinal epithelial organoids_139a 371 23 1001 115 2 90 440 CCDC134,SREBF2,MIR33A
SE_02_047800330 chr22:41823257-41862772 Sample_02_0478 Colon normal colon mucosa 330 19 997 115 2 90 440 CCDC134,SREBF2,MIR33A
SE_02_078800209 chr22:41823600-41863251 Sample_02_0788 Brain 3565 209 12 1001 115 2 92 440 CCDC134,SREBF2,MIR33A
SE_02_055500281 chr22:41823855-41848881 Sample_02_0555 Other HAP1_WT 281 15 614 70 2 88 440 CCDC134,SREBF2
SE_02_115300280 chr22:41823887-41889442 Sample_02_1153 Lymphoma RL_R1446C_gRNA1 280 19 1627 180 4 199 1326 CCDC134,SREBF2,MIR378I,TNFRSF13C,SHISA8,MIR33A
SE_02_101700405 chr22:41823908-41876019 Sample_02_1017 Embryo H9_Mesendoderm 24h_Hydroxyurea 405 13 1303 144 3 170 907 CCDC134,SREBF2,MIR33A,MIR378I,SHISA8
SE_02_101600251 chr22:41823973-41865821 Sample_02_1016 Embryo H9_Mesendoderm_24h 251 14 1033 121 2 92 440 CCDC134,SREBF2,MIR33A,SHISA8
SE_02_093100265 chr22:41824046-41847450 Sample_02_0931 Embryo H9 UTXKO 265 4 570 65 2 84 440 CCDC134,SREBF2
SE_02_097500204 chr22:41824054-41848716 Sample_02_0975 Brain H3.3K27M-KO_DIPGXIII-c10p5-Rx_R2_cells 204 12 604 69 2 88 440 CCDC134,SREBF2
SE_02_096300577 chr22:41824065-41862832 Sample_02_0963 Brain H3.3K27M_Tumor-derived cell-line_G477p6_cells 577 8 972 113 2 90 440 CCDC134,SREBF2,MIR33A
SE_02_132100407 chr22:41824068-41862806 Sample_02_1321 Connective Tissue HT1080_FUS-DDIT3 407 15 972 113 2 90 440 CCDC134,SREBF2,MIR33A
SE_02_108400336 chr22:41824078-41847569 Sample_02_1084 Blood KBM7-derived near haploid cells 336 12 571 65 2 88 440 CCDC134,SREBF2
SE_02_078100423 chr22:41824145-41890509 Sample_02_0781 Lymphoma Pfeiffer_DMSO 423 29 1652 186 4 199 1326 CCDC134,SREBF2,MIR378I,CENPM,TNFRSF13C,SHISA8,MIR33A
SE_02_130400190 chr22:41824534-41889691 Sample_02_1304 Lymphoma RL_lenalidomide_tazemetostat 190 28 1621 179 4 199 1326 CCDC134,SREBF2,MIR378I,TNFRSF13C,SHISA8,MIR33A
SE_02_092100558 chr22:41824721-41863403 Sample_02_0921 Heart embryonic heart_CS22 558 14 979 111 2 92 440 CCDC134,SREBF2,MIR33A
SE_02_098400195 chr22:41824744-41875982 Sample_02_0984 Brain H3.3K27M-KO_DIPGXIII-C5P5 195 17 1284 141 3 170 907 CCDC134,SREBF2,MIR33A,MIR378I,SHISA8
SE_02_121800221 chr22:41824791-41865835 Sample_02_1218 Bone marrow Daudi 221 35 1017 118 2 92 440 CCDC134,SREBF2,MIR33A,SHISA8
SE_02_138600213 chr22:41824893-41863425 Sample_02_1386 Peripheral blood Karpas-299_ALK+ 213 11 975 111 2 92 440 CCDC134,SREBF2,MIR33A
SE_02_082600804 chr22:41825007-41865059 Sample_02_0826 Stomach gastric tumor 804 21 1002 117 2 92 440 CCDC134,SREBF2,MIR33A,SHISA8
SE_02_142400362 chr22:41825064-41845380 Sample_02_1424 Haematopoietic and lymphoid tissue bone marrow K562_Triptolide_4h 362 6 521 60 2 83 440 CCDC134,SREBF2
SE_02_053300870 chr22:41825085-41863363 Sample_02_0533 Blood vessel Circle of Willis_54y 870 17 970 111 2 92 440 CCDC134,SREBF2,MIR33A
SE_01_008800682 chr22:41825154-41863730 Sample_01_0088 Tibial nerve tibial-nerve 682 7 978 112 2 92 440 SREBF2,CCDC134,MIR33A
SE_02_090100951 chr22:41825171-41873740 Sample_02_0901 Heart left ventricle_LV1471 951 14 1209 138 3 146 727 CCDC134,SREBF2,MIR33A,MIR378I,SHISA8
SE_02_034200719 chr22:41825222-41849224 Sample_02_0342 Liver HSPCs_F0 719 5 589 67 2 88 440 SREBF2,CCDC134
SE_00_003500533 chr22:41825230-41866283 Sample_00_0035 Sigmoid colon sigmoid-colon 533 11 1025 118 2 92 440 SREBF2,CCDC134,MIR33A
SE_00_003400922 chr22:41825235-41863539 Sample_00_0034 Right cardiac atrium right-cardiac-atrium 922 7 972 112 2 92 440 SREBF2,CCDC134,MIR33A
SE_01_002300336 chr22:41825245-41863516 Sample_01_0023 Embryo cardiac-muscle-cell 336 5 972 111 2 92 440 SREBF2,CCDC134,MIR33A
SE_02_038100773 chr22:41825264-41863793 Sample_02_0381 Heart purified cardiomyocyte WT 773 7 978 112 2 92 440 SREBF2,CCDC134,MIR33A
SE_02_074700500 chr22:41825283-41863351 Sample_02_0747 Embryo ES derived ventricular cardiomyocyte_day80 500 17 966 111 2 92 440 CCDC134,SREBF2,MIR33A
SE_02_089200528 chr22:41825360-41911162 Sample_02_0892 Heart left ventricle_LV1215 528 22 2222 255 5 302 2985 CCDC134,SREBF2,MIR33A,SHISA8,MIR378I,CENPM,TNFRSF13C,LINC00634
SE_00_003800495 chr22:41825414-41847638 Sample_00_0038 Spinal cord spinal-cord_108d 495 4 547 63 2 88 440 SREBF2,CCDC134
SE_02_092201079 chr22:41825430-41862728 Sample_02_0922 Heart fetal heart_PCW10_12434 1079 9 944 110 2 90 440 CCDC134,SREBF2,MIR33A
SE_02_092300746 chr22:41825430-41863343 Sample_02_0923 Heart fetal heart_PCW10_12522 746 11 962 111 2 92 440 CCDC134,SREBF2,MIR33A
SE_02_047500235 chr22:41825508-41859191 Sample_02_0475 Induced hepatocyte-like cells hepatocyte-like cells 235 8 845 102 2 88 439 CCDC134,SREBF2,MIR33A
SE_02_066000693 chr22:41825555-41861869 Sample_02_0660 Mammary gland MCF10DCIS 693 12 914 107 2 88 433 CCDC134,SREBF2,MIR33A
SE_04_000100925 chr22:41825570-41858155 Sample_04_0001 Blood heat shocked K562 925 6 818 101 2 88 425 CCDC134,SREBF2,MIR33A,NHP2L1,C22orf46
SE_02_101500927 chr22:41825666-41847552 Sample_02_1015 Embryo H9_ Undifferentiated 927 7 536 61 2 88 408 CCDC134,SREBF2
SE_02_109500627 chr22:41825727-41846106 Sample_02_1095 Blood CD34 Erythroid cells_Don002 627 4 517 59 2 84 400 CCDC134,SREBF2
SE_02_146600376 chr22:41825729-41857485 Sample_02_1466 Blood HUDEP-2_BCL11AKO 376 7 799 97 2 88 399 CCDC134,SREBF2,MIR33A
SE_02_074600329 chr22:41825775-41862930 Sample_02_0746 Embryo ES derived primitive cardiomyocite_day15 329 18 938 109 2 89 392 CCDC134,SREBF2,MIR33A
SE_02_136300260 chr22:41825816-41849103 Sample_02_1363 Blood Hudep2 260 6 568 66 2 85 385 CCDC134,SREBF2
SE_00_001000512 chr22:41825898-41847198 Sample_00_0010 Embryo endodermal-cell 512 4 525 60 2 80 364 SREBF2,CCDC134
SE_02_127300760 chr22:41825917-41865676 Sample_02_1273 Cervix HeLa 760 17 982 116 2 88 358 CCDC134,SREBF2,MIR33A,SHISA8
SE_02_129600313 chr22:41825962-41849142 Sample_02_1296 Perigastric lymph node Perigastric lymph node 313 10 564 64 2 84 342 CCDC134,SREBF2
SE_02_115200182 chr22:41825993-41889398 Sample_02_1152 Lymphoma RL_WT_gRNA1 182 12 1573 174 4 195 1222 CCDC134,SREBF2,MIR378I,TNFRSF13C,SHISA8,MIR33A
SE_02_122300740 chr22:41826005-41866049 Sample_02_1223 Bone marrow KMS28BM 740 17 990 115 2 88 333 CCDC134,SREBF2,MIR33A,SHISA8
SE_02_033000379 chr22:41826011-41862918 Sample_02_0330 Endoderm MHG 379 7 928 107 2 86 332 SREBF2,CCDC134,MIR33A
SE_02_035000400 chr22:41826029-41862909 Sample_02_0350 Dorsolateral prefrontal cortex dorsolateral-prefrontal-cortex 400 6 928 107 2 86 327 SREBF2,CCDC134,MIR33A
SE_02_053400871 chr22:41826041-41846568 Sample_02_0534 Blood vessel Circle of Willis_60y 871 6 512 57 2 80 325 CCDC134,SREBF2
SE_02_117900395 chr22:41826066-41847807 Sample_02_1179 Brain GBM08 395 3 529 60 2 84 320 CCDC134,SREBF2
SE_02_003900502 chr22:41826086-41847750 Sample_02_0039 Embryo AFG 502 5 527 60 2 84 315 SREBF2,CCDC134
SE_02_096600550 chr22:41826103-41847101 Sample_02_0966 Brain H3.3K27M_JN29-BS3 550 6 521 59 2 80 312 CCDC134,SREBF2
SE_02_120500727 chr22:41826157-41878105 Sample_02_1205 Brain NB3 727 27 1292 142 3 179 902 CCDC134,SREBF2,MIR378I,TNFRSF13C,SHISA8,MIR33A
SE_02_098901203 chr22:41826221-41865566 Sample_02_0989 Kidney kidney cortex_WT 1203 18 970 114 2 88 284 CCDC134,SREBF2,MIR33A,SHISA8
SE_01_010700359 chr22:41826245-41865698 Sample_01_0107 Esophagus esophagus squamous epithelium 359 7 974 114 2 88 282 CCDC134,SREBF2,MIR33A,SHISA8
Genomic distribution of SEs associated with CCDC134
Genome Browser

The strength of the tissue affected by the gene

Expression of CCDC134

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)