SEdb 2.0
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Gene overview

Strategies/Algorithm: overlap Ensembl ID:
Gene: C7ORF43 Gene type:
Strand: External links:
Genomic region: :- Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_020500047 chr7:100123968-100158310 Sample_02_0205 Stomach Gastric_Primary_Sample_T 47 5 864 84 1 142 1947 CNPY4,MBLAC1,C7ORF59,C7ORF43,MIR25,TAF6,MCM7,MIR93,GPC2,GAL3ST4,COPS6,STAG3,MIR106B,ZNF3,AP4M1
SE_01_008401436 chr7:100147868-100164335 Sample_01_0084 Spleen spleen 1436 3 456 37 0 155 1808 C7ORF43,C7ORF59,GAL3ST4,CNPY4,STAG3,TAF6,MCM7,GPC2,AP4M1,MBLAC1
SE_02_022800512 chr7:100147954-100164589 Sample_02_0228 Oesophagus KYSE510 512 4 462 36 0 155 1808 C7ORF43,C7ORF59,GAL3ST4,CNPY4,STAG3,TAF6,MCM7,GPC2,AP4M1,MBLAC1
SE_02_088601765 chr7:100150818-100163916 Sample_02_0886 Skin foreskin_ p63KLF4 1765 3 354 25 0 141 1614 MIR4658,LAMTOR4,C7ORF43,GAL3ST4,AP4M1,MCM7,STAG3,TAF6,MBLAC1,CNPY4,GPC2
SE_02_047701097 chr7:100152497-100159212 Sample_02_0477 Colon intestinal epithelial organoids_139a 1097 1 191 13 0 119 1268 LAMTOR4,C7ORF43,MIR4658,TAF6,STAG3,MBLAC1,CNPY4,GPC2,GAL3ST4
SE_02_039601958 chr7:100153131-100172339 Sample_02_0396 Skin NHEK-D 1958 7 497 30 1 190 2761 C7ORF43,C7ORF59,GPC2,GAL3ST4,CNPY4,TAF6,PVRIG,STAG3,MBLAC1
SE_02_104901988 chr7:100156123-100159190 Sample_02_1049 Peripheral blood CD4+ cell_ROMI 1988 1 71 4 0 72 659 MIR4658,C7ORF43,TAF6,STAG3,MBLAC1,CNPY4,LAMTOR4,GPC2,GAL3ST4
Genomic distribution of SEs associated with C7ORF43
Genome Browser

The strength of the tissue affected by the gene

Expression of C7ORF43

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)