SEdb 2.0
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Gene overview

Strategies/Algorithm: overlap Ensembl ID:
Gene: C1ORF144 Gene type:
Strand: External links:
Genomic region: :- Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_017200722 chr1:16323593-16397911 Sample_02_0172 Lung IMR-90_quiescent 722 12 1976 233 2 172 1029 FBXO42,C1ORF144,NECAP2,SPATA21
SE_02_010100342 chr1:16346693-16399301 Sample_02_0101 Peripheral blood Macrophages_GM-CSF_72h_IFN-y 342 8 1394 160 2 181 1259 SPATA21,FBXO42,C1ORF144,NECAP2
SE_01_008600748 chr1:16348070-16394068 Sample_01_0086 Thoracic aorta thoracic-aorta 748 5 1228 146 2 100 462 FBXO42,C1ORF144,NECAP2,SPATA21
SE_01_007000660 chr1:16348322-16398147 Sample_01_0070 Ascending aorta ascending-aorta 660 8 1324 156 2 176 1079 FBXO42,C1ORF144,NECAP2,SPATA21
SE_01_007300804 chr1:16349669-16394048 Sample_01_0073 Coronary artery coronary-artery 804 7 1191 142 2 97 462 FBXO42,C1ORF144,NECAP2,SPATA21
SE_00_004000394 chr1:16351063-16403450 Sample_00_0040 Spleen spleen_30y 394 14 1431 168 2 182 1473 SPATA21,FBXO42,C1ORF144,NECAP2,C1orf134,SZRD1
SE_02_021000750 chr1:16363065-16399584 Sample_02_0210 Lung MRC-5_N_1DPT 750 6 982 103 2 153 1176 SPATA21,C1ORF144,FBXO42,NECAP2
SE_02_021100718 chr1:16363072-16399897 Sample_02_0211 Lung MRC-5_NFD_1DPT 718 4 990 104 2 153 1195 SPATA21,C1ORF144,FBXO42,NECAP2
SE_02_026100725 chr1:16363926-16399641 Sample_02_0261 Osteoblastic hFOB_differentiated 725 5 960 101 2 151 1185 SPATA21,C1ORF144,FBXO42,NECAP2
SE_01_006901008 chr1:16364147-16397347 Sample_01_0069 Adrenal gland adrenal-gland 1008 7 885 98 2 108 750 C1ORF144,FBXO42,NECAP2,SPATA21
SE_01_008401323 chr1:16364194-16404056 Sample_01_0084 Spleen spleen 1323 9 1087 123 2 156 1413 SPATA21,C1ORF144,FBXO42,NECAP2
SE_00_002700754 chr1:16366441-16369188 Sample_00_0027 Blood natural-killer-cell 754 1 67 7 0 31 133 C1ORF144,FBXO42
SE_00_000300922 chr1:16366472-16388065 Sample_00_0003 Adrenal gland adrenal-gland_97d 922 3 590 61 1 36 133 C1ORF144,FBXO42,SPATA21
SE_00_001500519 chr1:16366501-16397583 Sample_00_0015 Lung IMR-90 519 7 841 91 2 114 794 C1ORF144,FBXO42,NECAP2,SPATA21
SE_00_002500922 chr1:16366517-16399182 Sample_00_0025 Muscle of leg muscle-of-leg 922 4 879 92 2 147 1094 SPATA21,C1ORF144,FBXO42,NECAP2
SE_02_010800670 chr1:16366525-16388217 Sample_02_0108 Fallopian tube FT246 670 8 592 62 1 36 133 C1ORF144,FBXO42,SPATA21
SE_02_013100926 chr1:16366583-16398879 Sample_02_0131 Lung 1015_PT 926 7 866 92 2 147 1057 SPATA21,C1ORF144,FBXO42,NECAP2
SE_02_005500909 chr1:16366762-16403442 Sample_02_0055 Lung IMR-90_Nutlin-3a 909 6 1012 112 2 152 1329 SPATA21,C1ORF144,FBXO42,NECAP2
SE_00_002300841 chr1:16367081-16387873 Sample_00_0023 Embryo mesenchymal-stem-cell 841 5 568 61 1 34 109 C1ORF144,FBXO42,SPATA21
Genomic distribution of SEs associated with C1ORF144
Genome Browser

The strength of the tissue affected by the gene

Expression of C1ORF144

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)