SEdb 2.0
  1. Search
  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: overlap Ensembl ID: ENSG00000188277
Gene: C15ORF62 Gene type: protein_coding
Strand: + External links:
Genomic region: chr15:40769980-40772449 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_125200580 chr15:40757428-40788227 Sample_02_1252 Bone marrow RS4_11_DMSO_10h 580 8 831 90 0 144 1814 C15ORF62,DNAJC17,GCHFR,ZFYVE19,PPP1R14D,RMDN3
SE_02_077500975 chr15:40759547-40805604 Sample_02_0775 Pancreas EndoC-BH1_SE 975 9 1259 129 0 158 1814 C15ORF62,DNAJC17,GCHFR,ZFYVE19,PPP1R14D,RMDN3,SPINT1
SE_02_032500793 chr15:40760916-40803987 Sample_02_0325 Liver hepatocytes_d1 793 11 1175 115 0 158 1814 GCHFR,C15ORF62,DNAJC17,SPINT1,ZFYVE19,PPP1R14D,FAM82A2
SE_01_006100194 chr15:40762377-40788680 Sample_01_0061 Prostate RWPE1 194 3 712 77 0 144 1814 GCHFR,C15ORF62,DNAJC17,FAM82A2,ZFYVE19,PPP1R14D
SE_00_003600397 chr15:40762413-40771765 Sample_00_0036 Small intestine small-intestine_108days 397 2 286 22 0 95 920 GCHFR,C15ORF62,DNAJC17,ZFYVE19,FAM82A2
SE_02_088400114 chr15:40762453-40799665 Sample_02_0884 Colon LoVo 114 7 1024 94 0 158 1814 C15ORF62,DNAJC17,GCHFR,ZFYVE19,PPP1R14D,RMDN3,SPINT1
SE_02_035300116 chr15:40762666-40797326 Sample_02_0353 Colon HT29 116 8 944 90 0 156 1814 GCHFR,C15ORF62,DNAJC17,SPINT1,ZFYVE19,PPP1R14D,FAM82A2
SE_02_035400570 chr15:40762760-40794679 Sample_02_0354 Colon Colo205 570 9 859 83 0 147 1814 GCHFR,C15ORF62,DNAJC17,SPINT1,ZFYVE19,PPP1R14D,FAM82A2
SE_01_008500841 chr15:40762854-40799357 Sample_01_0085 Stomach stomach 841 7 1001 94 0 156 1814 GCHFR,C15ORF62,DNAJC17,SPINT1,ZFYVE19,PPP1R14D,FAM82A2
SE_02_036100105 chr15:40762859-40794397 Sample_02_0361 Colon HT29_DMSO 105 6 847 82 0 147 1814 GCHFR,C15ORF62,DNAJC17,FAM82A2,SPINT1,ZFYVE19,PPP1R14D
SE_01_007200918 chr15:40762910-40794079 Sample_01_0072 Breast epithelium breast-epithelium 918 6 834 81 0 147 1814 GCHFR,C15ORF62,DNAJC17,FAM82A2,SPINT1,ZFYVE19,PPP1R14D
SE_02_029400836 chr15:40762980-40773838 Sample_02_0294 Pancreatic L3-6_DMSO 836 1 312 27 0 98 1149 GCHFR,C15ORF62,DNAJC17,ZFYVE19,FAM82A2
SE_02_009500516 chr15:40763016-40796990 Sample_02_0095 Mammary gland MDA-MB-468 516 6 920 89 0 156 1814 GCHFR,C15ORF62,DNAJC17,SPINT1,ZFYVE19,PPP1R14D,FAM82A2
SE_02_025700504 chr15:40763061-40797562 Sample_02_0257 Endometrioid endometrioid_adenocarcinoma_TumorA 504 3 935 89 0 156 1814 GCHFR,C15ORF62,DNAJC17,SPINT1,ZFYVE19,PPP1R14D,FAM82A2
SE_02_098901221 chr15:40763070-40796826 Sample_02_0989 Kidney kidney cortex_WT 1221 8 912 89 0 156 1814 C15ORF62,DNAJC17,GCHFR,ZFYVE19,PPP1R14D,RMDN3,SPINT1
SE_02_116700483 chr15:40763189-40795384 Sample_02_1167 Biliary H69_TGF Vehicle_1 483 14 866 82 0 147 1814 C15ORF62,DNAJC17,GCHFR,ZFYVE19,PPP1R14D,RMDN3,SPINT1
SE_00_001100684 chr15:40763219-40772549 Sample_00_0011 Esophagus esophagus 684 1 282 20 0 96 1064 GCHFR,C15ORF62,DNAJC17,ZFYVE19,FAM82A2
SE_02_116900852 chr15:40763230-40804391 Sample_02_1169 Biliary H69_TGF beta_16h_2 852 11 1115 110 0 156 1814 C15ORF62,DNAJC17,GCHFR,ZFYVE19,PPP1R14D,RMDN3,SPINT1
SE_02_081700408 chr15:40763298-40798838 Sample_02_0817 Ovary Epithelial ovarian cancer 408 13 967 90 0 154 1814 C15ORF62,DNAJC17,GCHFR,ZFYVE19,PPP1R14D,RMDN3,SPINT1
SE_02_110500752 chr15:40765340-40774373 Sample_02_1105 Brain NBL-S 752 1 262 19 0 91 1090 C15ORF62,DNAJC17,GCHFR,RMDN3,ZFYVE19
SE_02_039601256 chr15:40765434-40799187 Sample_02_0396 Skin NHEK-D 1256 10 916 85 0 147 1667 GCHFR,C15ORF62,DNAJC17,SPINT1,ZFYVE19,PPP1R14D,FAM82A2
SE_02_067200511 chr15:40765587-40796843 Sample_02_0672 Endometrium endometrium cancer_DSG 511 12 836 81 0 147 1667 C15ORF62,DNAJC17,GCHFR,ZFYVE19,PPP1R14D,RMDN3,SPINT1
SE_02_104601974 chr15:40765598-40789482 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 1974 9 635 68 0 135 1667 C15ORF62,DNAJC17,GCHFR,ZFYVE19,PPP1R14D,RMDN3
SE_02_108600701 chr15:40765598-40789739 Sample_02_1086 Mammary gland T47D_shCtrl_0hr 701 7 638 68 0 136 1667 C15ORF62,DNAJC17,GCHFR,ZFYVE19,PPP1R14D,RMDN3
SE_02_076600823 chr15:40766110-40795024 Sample_02_0766 Ovary PEO1 823 14 767 72 0 133 1565 C15ORF62,DNAJC17,GCHFR,ZFYVE19,PPP1R14D,RMDN3,SPINT1
SE_02_053000608 chr15:40766122-40799618 Sample_02_0530 Mammary gland MCF10A 608 11 910 83 0 142 1565 C15ORF62,DNAJC17,GCHFR,ZFYVE19,PPP1R14D,RMDN3,SPINT1
SE_02_066000505 chr15:40766234-40799536 Sample_02_0660 Mammary gland MCF10DCIS 505 11 905 82 0 142 1565 C15ORF62,DNAJC17,GCHFR,ZFYVE19,PPP1R14D,RMDN3,SPINT1
SE_02_053200379 chr15:40766275-40803922 Sample_02_0532 Mammary gland T47D 379 9 1010 95 0 142 1565 C15ORF62,DNAJC17,GCHFR,ZFYVE19,PPP1R14D,RMDN3,SPINT1
SE_02_125400553 chr15:40766564-40799582 Sample_02_1254 Bladder Bladder tumor Basal1 553 10 899 82 0 142 1565 C15ORF62,DNAJC17,GCHFR,ZFYVE19,PPP1R14D,RMDN3,SPINT1
SE_02_104801190 chr15:40766588-40788739 Sample_02_1048 Peripheral blood CD4+ cell_UNTREATED 1190 10 591 65 0 128 1565 C15ORF62,DNAJC17,GCHFR,ZFYVE19,PPP1R14D,RMDN3
SE_02_125800280 chr15:40767174-40799469 Sample_02_1258 Liver Pancreatic cancer cells derived from liver metastasis 280 9 876 81 0 141 1543 C15ORF62,DNAJC17,GCHFR,ZFYVE19,PPP1R14D,RMDN3,SPINT1
SE_02_151000517 chr15:40767244-40799158 Sample_02_1510 Lung H3122_LR_Pano 517 17 863 80 0 141 1530 C15ORF62,DNAJC17,GCHFR,ZFYVE19,PPP1R14D,RMDN3,SPINT1
SE_02_083101170 chr15:40767290-40771127 Sample_02_0831 Umblical vein HUVECs_TNF0min 1170 2 121 5 0 72 498 C15ORF62,DNAJC17,GCHFR,RMDN3,ZFYVE19
SE_02_105100153 chr15:40767337-40794139 Sample_02_1051 Esophagus Eso26 153 9 707 67 0 125 1509 C15ORF62,DNAJC17,GCHFR,ZFYVE19,PPP1R14D,RMDN3,SPINT1
SE_02_047700629 chr15:40767814-40798972 Sample_02_0477 Colon intestinal epithelial organoids_139a 629 16 836 78 0 133 1391 C15ORF62,DNAJC17,ZFYVE19,PPP1R14D,GCHFR,RMDN3,SPINT1
SE_02_035500251 chr15:40767828-40800090 Sample_02_0355 Colon HCT15 251 8 867 82 0 132 1391 C15ORF62,DNAJC17,SPINT1,GCHFR,ZFYVE19,PPP1R14D,FAM82A2
SE_02_024000820 chr15:40767907-40799643 Sample_02_0240 Colon V429_2 820 10 858 78 0 131 1376 C15ORF62,DNAJC17,SPINT1,GCHFR,ZFYVE19,PPP1R14D,FAM82A2
SE_02_074800596 chr15:40768127-40799449 Sample_02_0748 Mammary gland HCC1599_WO 596 7 843 78 0 122 1335 C15ORF62,DNAJC17,ZFYVE19,PPP1R14D,GCHFR,RMDN3,SPINT1
SE_02_146400458 chr15:40771938-40790488 Sample_02_1464 Ovary CAOV4 458 6 463 55 0 53 862 C15ORF62,DNAJC17,ZFYVE19,PPP1R14D,GCHFR,RMDN3
Genomic distribution of SEs associated with C15ORF62
Genome Browser

The strength of the tissue affected by the gene

Expression of C15ORF62

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)