SEdb 2.0
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Gene overview

Strategies/Algorithm: overlap Ensembl ID: ENSG00000162650
Gene: ATXN7L2 Gene type: protein_coding
Strand: + External links:
Genomic region: chr1:109483479-109492804 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_01_007600959 chr1:109464467-109485629 Sample_01_0076 Gastrocnemius medialis gastrocnemius-medialis 959 1 504 62 2 250 1372 ATXN7L2,SYPL2,AMIGO1,CYB561D1,PSMA5
SE_02_104602621 chr1:109477930-109507738 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 2621 9 700 58 2 487 3515 ATXN7L2,AMIGO1,SYPL2,CYB561D1,GNAI3,GPR61
SE_01_002100927 chr1:109481152-109499836 Sample_01_0021 Skin bipolar-neuron 927 2 434 28 2 389 2669 CYB561D1,ATXN7L2,SYPL2,AMIGO1,GNAI3,GPR61
SE_00_000700503 chr1:109482040-109510934 Sample_00_0007 Blood naive thymus-derived CD4-positive,alpha-beta T cell 503 3 652 58 2 540 3270 CYB561D1,ATXN7L2,AMIGO1,SYPL2,GNAI3,GPR61
SE_00_000300862 chr1:109482873-109549639 Sample_00_0003 Adrenal gland adrenal-gland_97d 862 9 1630 179 15 809 4097 GPR61,GNAI3,CYB561D1,AMIGO1,ATXN7L2,MIR197,SYPL2
SE_02_002200417 chr1:109483054-109510383 Sample_02_0022 Blood CD8donorA 417 12 627 55 2 519 3244 CYB561D1,ATXN7L2,AMIGO1,GNAI3,SYPL2,GPR61
SE_02_036900274 chr1:109483912-109503087 Sample_02_0369 Skeletal muscle RD 274 3 458 29 2 348 2553 CYB561D1,ATXN7L2,AMIGO1,GNAI3,SYPL2,GPR61
SE_02_037900274 chr1:109483912-109503087 Sample_02_0379 Skeletal muscle RD-Fusion-Negative-Rhabdomyosarcoma 274 3 458 29 2 348 2553 CYB561D1,ATXN7L2,AMIGO1,GNAI3,SYPL2,GPR61
SE_02_104301052 chr1:109486989-109514779 Sample_02_1043 Peripheral blood Peripheral blood cells_CTCL1200 1052 16 666 74 3 399 2907 ATXN7L2,AMIGO1,CYB561D1,GNAI3,SYPL2,GPR61
SE_02_036400467 chr1:109489974-109503157 Sample_02_0364 Skeletal muscle CTR 467 1 327 20 1 201 1640 CYB561D1,ATXN7L2,AMIGO1,GNAI3,SYPL2,GPR61
SE_02_108000055 chr1:109490641-109536355 Sample_02_1080 Muscle JR1 shCtrl 55 13 1161 146 12 423 2138 ATXN7L2,AMIGO1,CYB561D1,GNAI3,SYPL2,GPR61
SE_02_087700452 chr1:109491585-109500795 Sample_02_0877 Muscle SMS-CTR_CASZ1b_Dox 452 5 230 16 1 122 1304 ATXN7L2,CYB561D1,AMIGO1,GNAI3,SYPL2,GPR61
Genomic distribution of SEs associated with ATXN7L2
Genome Browser

The strength of the tissue affected by the gene

Expression of ATXN7L2

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)