Gene overview
| Strategies/Algorithm: | overlap | Ensembl ID: | ENSG00000184831 |
| Gene: | APOO | Gene type: | protein_coding |
| Strand: | - | External links: |
|
| Genomic region: | chrX:23833353-23907938 | Genome Browser: |   |
Super-enhancer search result of gene-based
| SE ID | SE Region | Sample ID | Tissue type | Biosample name | SE rank | Element | Common SNP | eQTL | Risk SNP | TFBS | CRISPR Cas9 | Gene |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SE_02_103600117 | chrX:23736555-23904754 |
Sample_02_1036 | Mammary gland | HCC70_XY018 | 117 | 97 | 3568 | 277 | 7 | 232 | 970 | SAT1,ACOT9,APOO,CXORF58 |
| SE_02_103500274 | chrX:23753907-23853184 |
Sample_02_1035 | Mammary gland | HCC70_Vehicle | 274 | 52 | 2133 | 178 | 4 | 166 | 587 | SAT1,APOO,ACOT9 |
| SE_02_077500260 | chrX:23760486-23849193 |
Sample_02_0775 | Pancreas | EndoC-BH1_SE | 260 | 37 | 1893 | 144 | 4 | 156 | 587 | SAT1,APOO,ACOT9 |
| SE_02_025700047 | chrX:23764163-23846998 |
Sample_02_0257 | Endometrioid | endometrioid_adenocarcinoma_TumorA | 47 | 18 | 1757 | 123 | 3 | 156 | 587 | SAT1,APOO,ACOT9 |
| SE_02_070900080 | chrX:23772830-23846307 |
Sample_02_0709 | Pancreas | hT85_organoid | 80 | 25 | 1569 | 85 | 3 | 140 | 587 | SAT1,APOO,ACOT9 |
| SE_02_043600015 | chrX:23777377-23846838 |
Sample_02_0436 | Kidney | HEK293A_empty-vector_DMSO_6h | 15 | 12 | 1455 | 70 | 3 | 137 | 587 | SAT1,APOO,ACOT9 |
| SE_02_127800271 | chrX:23778484-23854766 |
Sample_02_1278 | Chordoma | UCH1_DMSO_48h | 271 | 14 | 1561 | 70 | 3 | 139 | 587 | SAT1,APOO,ACOT9 |
| SE_02_116300009 | chrX:23778989-23845091 |
Sample_02_1163 | Embryonic kidney | HEK293 no dox | 9 | 11 | 1382 | 63 | 3 | 135 | 587 | SAT1,APOO,ACOT9 |
| SE_02_069800024 | chrX:23779402-23846404 |
Sample_02_0698 | Lung | NCI-H1048-cas9_sgPOU2F3 | 24 | 21 | 1393 | 63 | 3 | 134 | 587 | SAT1,APOO,ACOT9 |
| SE_02_069700219 | chrX:23788074-23844856 |
Sample_02_0697 | Lung | NCI-H1048-cas9_sgHROSA | 219 | 23 | 1165 | 50 | 2 | 73 | 217 | APOO,SAT1,ACOT9 |
| SE_02_131200226 | chrX:23801425-23846113 |
Sample_02_1312 | Brain | hMGLs_WT | 226 | 10 | 924 | 39 | 2 | 30 | 217 | APOO,SAT1 |
| SE_02_131300296 | chrX:23801736-23846218 |
Sample_02_1313 | Brain | hMGLs_CD33_SNP | 296 | 11 | 919 | 38 | 2 | 30 | 217 | APOO,SAT1 |
| SE_02_131600205 | chrX:23801766-23854448 |
Sample_02_1316 | Brain | hMGLs_TREM2-R47H | 205 | 10 | 1060 | 42 | 2 | 33 | 217 | APOO,SAT1 |
| SE_02_131800215 | chrX:23802389-23846702 |
Sample_02_1318 | Brain | hMGLs_SORL1-A528T | 215 | 14 | 913 | 36 | 2 | 30 | 217 | APOO,SAT1 |
| SE_02_149300252 | chrX:23802433-23846179 |
Sample_02_1493 | Skin | SK-MEL-5_DMSO_6h | 252 | 16 | 903 | 36 | 2 | 30 | 217 | APOO,SAT1 |
| SE_02_018500374 | chrX:23803141-23856019 |
Sample_02_0185 | Skin | UACC257 | 374 | 16 | 1062 | 41 | 2 | 33 | 217 | APOO,SAT1 |
| SE_02_028600466 | chrX:23821642-23886653 |
Sample_02_0286 | Liver | HuH7_IL-1alpha_1h | 466 | 9 | 1290 | 59 | 3 | 58 | 471 | APOO,SAT1,CXORF58 |
| SE_02_131700599 | chrX:23833402-23846166 |
Sample_02_1317 | Brain | hMGLs_SORL1-KO | 599 | 5 | 273 | 9 | 1 | 24 | 194 | APOO,SAT1 |
| SE_02_001800548 | chrX:23838732-23846170 |
Sample_02_0018 | Embryo | NEC | 548 | 3 | 164 | 8 | 1 | 17 | 35 | APOO,SAT1 |
| SE_00_002001292 | chrX:23840430-23902866 |
Sample_00_0020 | Large intestine | large-intestine_108d | 1292 | 9 | 1264 | 60 | 4 | 56 | 275 | APOO,CXORF58 |
| SE_02_046501349 | chrX:23853681-23902506 |
Sample_02_0465 | Adipose | subcutaneous adipocytes | 1349 | 18 | 998 | 51 | 3 | 39 | 254 | APOO,CXORF58 |
| SE_02_103502069 | chrX:23869728-23900804 |
Sample_02_1035 | Mammary gland | HCC70_Vehicle | 2069 | 20 | 620 | 37 | 1 | 23 | 133 | APOO,CXORF58 |
| SE_04_000900500 | chrX:23871053-23903047 |
Sample_04_0009 | Lung | A549 | 500 | 4 | 631 | 38 | 2 | 28 | 133 | APOO,CXORF58 |
| SE_03_001300449 | chrX:23871146-23903366 |
Sample_03_0013 | Lung | A549 | 449 | 3 | 636 | 38 | 2 | 28 | 133 | APOO,CXORF58 |
| SE_03_000800554 | chrX:23871166-23903292 |
Sample_03_0008 | Lung | A549_dexamethasone_7h | 554 | 3 | 632 | 38 | 2 | 28 | 133 | APOO,CXORF58 |
| SE_03_000900417 | chrX:23871294-23903296 |
Sample_03_0009 | Lung | A549_dexamethasone_3h | 417 | 3 | 628 | 38 | 2 | 28 | 133 | APOO,CXORF58 |
| SE_03_000500376 | chrX:23871327-23903293 |
Sample_03_0005 | Lung | A549_dexamethasone_0.5h | 376 | 3 | 628 | 38 | 2 | 28 | 133 | APOO,CXORF58 |
| SE_01_000600472 | chrX:23871336-23903092 |
Sample_01_0006 | Lung | A549_ethanol_1h | 472 | 4 | 627 | 38 | 2 | 28 | 133 | APOO,CXORF58 |
| SE_03_001500530 | chrX:23871357-23903050 |
Sample_03_0015 | Lung | A549_dexamethasone_8h | 530 | 3 | 625 | 38 | 2 | 28 | 133 | APOO,CXORF58 |
| SE_04_000700297 | chrX:23871489-23902568 |
Sample_04_0007 | Lung | A549 FOXA2 shRNA2 | 297 | 5 | 612 | 38 | 2 | 27 | 133 | APOO,CXORF58 |
| SE_04_000600468 | chrX:23871527-23902582 |
Sample_04_0006 | Lung | A549 GFP control | 468 | 7 | 612 | 38 | 2 | 27 | 133 | APOO,CXORF58 |
| SE_02_152300531 | chrX:23871548-23902592 |
Sample_02_1523 | Lung | A549 DMSO | 531 | 10 | 612 | 38 | 2 | 27 | 133 | APOO,CXORF58 |
| SE_02_127801183 | chrX:23874518-23908722 |
Sample_02_1278 | Chordoma | UCH1_DMSO_48h | 1183 | 8 | 701 | 42 | 2 | 52 | 300 | CXORF58,APOO |
| SE_02_103800460 | chrX:23874610-23902591 |
Sample_02_1038 | Pharynx | FaDu LPS | 460 | 9 | 565 | 34 | 2 | 26 | 105 | APOO,CXORF58 |
| SE_02_059000700 | chrX:23874674-23901514 |
Sample_02_0590 | Cervix | HeLa Kyoto_Luci PWWP2A siRNA | 700 | 12 | 543 | 32 | 2 | 20 | 102 | APOO,CXORF58 |
| SE_02_154100849 | chrX:23874713-23902614 |
Sample_02_1541 | Nasopharyngeal | HNE1 | 849 | 12 | 562 | 34 | 2 | 26 | 102 | APOO,CXORF58 |
| SE_04_001000348 | chrX:23881801-23902649 |
Sample_04_0010 | Lung | A549 TGFb | 348 | 2 | 422 | 25 | 2 | 15 | 0 | APOO,CXORF58 |
| SE_03_000400381 | chrX:23881814-23903069 |
Sample_03_0004 | Lung | A549_dexamethasone_4h | 381 | 2 | 434 | 25 | 2 | 16 | 0 | APOO,CXORF58 |
| SE_03_001600328 | chrX:23881906-23909051 |
Sample_03_0016 | Lung | A549_dexamethasone_6h | 328 | 3 | 558 | 33 | 2 | 42 | 191 | APOO,CXORF58 |
| SE_03_001000436 | chrX:23881981-23903089 |
Sample_03_0010 | Lung | A549_dexamethasone_1h | 436 | 2 | 433 | 25 | 2 | 16 | 0 | APOO,CXORF58 |
| SE_03_001100304 | chrX:23881984-23903354 |
Sample_03_0011 | Lung | A549_dexamethasone_5h | 304 | 3 | 437 | 25 | 2 | 16 | 0 | APOO,CXORF58 |
| SE_02_150201100 | chrX:23882153-23902545 |
Sample_02_1502 | Brain | SHEP-21N_DOX_24h_NOSPIKE | 1100 | 10 | 415 | 25 | 2 | 15 | 0 | APOO,CXORF58 |
| SE_02_043500119 | chrX:23882339-23909438 |
Sample_02_0435 | Kidney | HEK293A_WT-MEF2B_DMSO_6h | 119 | 4 | 557 | 33 | 2 | 43 | 191 | APOO,CXORF58 |
| SE_02_048101451 | chrX:23882517-23907926 |
Sample_02_0481 | Mammary gland | MDA-MB231 | 1451 | 10 | 532 | 33 | 2 | 33 | 99 | APOO,CXORF58 |
| SE_02_043600152 | chrX:23882519-23908649 |
Sample_02_0436 | Kidney | HEK293A_empty-vector_DMSO_6h | 152 | 7 | 543 | 33 | 2 | 40 | 191 | APOO,CXORF58 |
| SE_03_001400514 | chrX:23882722-23903107 |
Sample_03_0014 | Lung | A549_dexamethasone_2h | 514 | 2 | 417 | 24 | 2 | 16 | 0 | APOO,CXORF58 |
| SE_04_000300276 | chrX:23883025-23902523 |
Sample_04_0003 | Lung | A549 TEAD4 shRNA TGFb | 276 | 7 | 398 | 23 | 2 | 15 | 0 | APOO,CXORF58 |
| SE_02_116300025 | chrX:23883199-23902416 |
Sample_02_1163 | Embryonic kidney | HEK293 no dox | 25 | 6 | 394 | 23 | 2 | 13 | 0 | APOO,CXORF58,CXorf58 |
| SE_02_072100880 | chrX:23883811-23902055 |
Sample_02_0721 | Pancreas | HPAFII_TP63dN_DOX | 880 | 5 | 371 | 22 | 2 | 10 | 0 | APOO,CXORF58 |
| SE_02_104301380 | chrX:23897704-23974111 |
Sample_02_1043 | Peripheral blood | Peripheral blood cells_CTCL1200 | 1380 | 24 | 1384 | 75 | 3 | 131 | 487 | CXORF58,APOO |
Genomic distribution of SEs associated with APOO