SEdb 2.0
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Gene overview

Strategies/Algorithm: overlap Ensembl ID: ENSG00000179750
Gene: APOBEC3B Gene type: protein_coding
Strand: + External links:
Genomic region: chr22:38982347-38992804 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_023700667 chr22:38920499-38994344 Sample_02_0237 Colon V389 667 18 2256 187 6 11 1450 APOBEC3A,APOBEC3B,APOBEC3F,CBX6,APOBEC3C,APOBEC3D
SE_01_005200078 chr22:38926719-38988924 Sample_01_0052 Blood neutrophil 78 7 1895 151 3 11 992 APOBEC3A,APOBEC3B,APOBEC3C,APOBEC3D
SE_02_001600273 chr22:38936026-38993848 Sample_02_0016 Blood erythroblasts 273 8 1818 155 3 11 1450 APOBEC3A,APOBEC3B,APOBEC3C,APOBEC3D,APOBEC3F
SE_00_000600166 chr22:38940545-38994617 Sample_00_0006 Blood CD14-positive-monocyte 166 9 1708 145 2 11 1450 APOBEC3A,APOBEC3B,APOBEC3C,APOBEC3D,APOBEC3F
SE_02_103602532 chr22:38970161-39006441 Sample_02_1036 Mammary gland HCC70_XY018 2532 6 1176 122 1 11 866 APOBEC3B,APOBEC3B-AS1,APOBEC3A_B,APOBEC3A,APOBEC3C,APOBEC3D,APOBEC3F
SE_02_003200315 chr22:38980621-39048414 Sample_02_0032 Pancreas pancreatic-islets-M 315 14 2468 242 1 35 3129 APOBEC3C,APOBEC3D,APOBEC3F,APOBEC3B,APOBEC3A,APOBEC3G,APOBEC3H
SE_02_113600856 chr22:38980628-38987069 Sample_02_1136 Bone U2OS-anaphase/telophase 856 1 217 12 1 11 408 APOBEC3B,APOBEC3A_B,APOBEC3D,APOBEC3A,APOBEC3B-AS1,APOBEC3C
SE_02_013100252 chr22:38980642-39048506 Sample_02_0131 Lung 1015_PT 252 16 2473 242 1 35 3129 APOBEC3C,APOBEC3D,APOBEC3F,APOBEC3B,APOBEC3A,APOBEC3G,APOBEC3H
SE_02_003600274 chr22:38981381-39053111 Sample_02_0036 Embryo H7 274 13 2632 268 1 42 3458 APOBEC3C,APOBEC3D,APOBEC3F,APOBEC3B,APOBEC3A,APOBEC3G,APOBEC3H
SE_02_003800733 chr22:38981628-39053113 Sample_02_0038 Embryo DE 733 14 2627 267 1 42 3458 APOBEC3C,APOBEC3D,APOBEC3F,APOBEC3B,APOBEC3A,APOBEC3G,APOBEC3H
Genomic distribution of SEs associated with APOBEC3B
Genome Browser

The strength of the tissue affected by the gene

Expression of APOBEC3B

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)