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Gene overview

Strategies/Algorithm: overlap Ensembl ID: ENSG00000116337
Gene: AMPD2 Gene type: protein_coding
Strand: + External links:
Genomic region: chr1:109616104-109632053 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_057600896 chr1:109600667-109625384 Sample_02_0576 Blood HEL_sgLKB1e2 896 7 526 54 3 158 1211 AMPD2,GNAT2,GSTM4,GSTM2,MIR197
SE_02_058000881 chr1:109600780-109625463 Sample_02_0580 Blood HEL_sgSIK3e4 881 7 526 54 3 161 1226 AMPD2,GNAT2,GSTM4,GSTM2,MIR197
SE_02_104900626 chr1:109601392-109644146 Sample_02_1049 Peripheral blood CD4+ cell_ROMI 626 17 1016 108 3 292 2728 AMPD2,GNAT2,GSTM1,GSTM2,GSTM4,MIR197
SE_02_092700209 chr1:109604394-109625018 Sample_02_0927 Peripheral blood neutrophils_US 209 4 430 47 3 132 1035 AMPD2,GNAT2,GSTM4,GSTM2,MIR197,GSTM5,CYB561D1,PSMA5,GPR61,ATXN7L2
SE_02_152900228 chr1:109605936-109641730 Sample_02_1529 Peripheral blood neutrophils_0BC75 228 5 868 94 2 270 2610 AMPD2,GNAT2,GSTM1,GSTM2,GSTM4,MIR197,GSTM5,CYB561D1,PSMA5,GPR61,ATXN7L2
SE_01_002400455 chr1:109607240-109624595 Sample_01_0024 Blood CD14-positive-monocyte 455 2 355 37 2 120 930 AMPD2,GNAT2,GSTM2,GSTM4,MIR197
SE_02_010000596 chr1:109607293-109625272 Sample_02_0100 Peripheral blood Macrophages_GM-CSF_72h 596 2 375 38 2 121 971 AMPD2,GNAT2,GSTM2,GSTM4,MIR197
SE_02_026700493 chr1:109609647-109630251 Sample_02_0267 Kidney 786-O 493 5 470 50 2 208 2008 AMPD2,GNAT2,GSTM2,GSTM4,MIR197
SE_02_153000318 chr1:109609983-109639455 Sample_02_1530 Peripheral blood neutrophils_0BA0X 318 8 714 77 2 247 2434 AMPD2,GNAT2,GSTM1,GSTM2,GSTM4,MIR197,GSTM5,CYB561D1,PSMA5,GPR61,ATXN7L2
SE_02_158000368 chr1:109610056-109643913 Sample_02_1580 Renal 786-O 368 5 819 87 2 250 2426 AMPD2,GNAT2,GSTM1,GSTM2,GSTM4,MIR197
SE_02_001200530 chr1:109610124-109629945 Sample_02_0012 Kidney 786-O_non-targeting 530 7 446 47 2 203 1880 AMPD2,GNAT2,GSTM2,GSTM4,MIR197
SE_02_157900570 chr1:109610235-109633320 Sample_02_1579 Renal 786-M1A 570 7 541 54 2 234 2394 AMPD2,GNAT2,GSTM4,GSTM2,MIR197
SE_02_001000989 chr1:109610342-109637284 Sample_02_0010 Kidney A-498_emptyvector 989 5 640 69 2 245 2380 AMPD2,GNAT2,GSTM2,GSTM4,MIR197
SE_02_004700332 chr1:109610669-109637829 Sample_02_0047 Pancreatic endoderm IIDP/donor790 332 5 647 71 2 243 2331 AMPD2,GNAT2,GSTM1,GSTM2,GSTM4,MIR197
SE_02_145500717 chr1:109610818-109621843 Sample_02_1455 Arter pulmonary arterial smooth muscle cells_PAH2_sialdh1a3 717 3 222 23 2 99 617 AMPD2,GNAT2,GSTM4,GSTM2,MIR197
SE_01_005200362 chr1:109613967-109625329 Sample_01_0052 Blood neutrophil 362 1 232 19 1 102 692 AMPD2,GSTM2,GSTM4,GNAT2,MIR197
SE_02_010400833 chr1:109614020-109624880 Sample_02_0104 Blood neutrophils 833 2 217 18 1 100 633 AMPD2,GSTM2,GSTM4,GNAT2,MIR197
SE_02_153100431 chr1:109614057-109625298 Sample_02_1531 Peripheral blood neutrophils_0B9ZK 431 1 228 19 1 102 681 AMPD2,GSTM4,GSTM2,GNAT2,MIR197,GSTM5,CYB561D1,PSMA5,GPR61,ATXN7L2
SE_00_000600343 chr1:109614173-109625141 Sample_00_0006 Blood CD14-positive-monocyte 343 2 224 19 1 100 638 AMPD2,GSTM2,GSTM4,GNAT2,MIR197
SE_02_119100643 chr1:109614446-109649805 Sample_02_1191 Brain GBM25 643 6 839 85 1 247 2223 AMPD2,GSTM1,GSTM2,GSTM4,MIR197,GNAT2
SE_02_131800483 chr1:109614566-109621492 Sample_02_1318 Brain hMGLs_SORL1-A528T 483 2 133 12 1 79 511 AMPD2,GSTM4,GSTM2,GNAT2,MIR197
SE_02_081601185 chr1:109614595-109622145 Sample_02_0816 Ovary Clear cell ovarian cancer 1185 2 149 13 1 92 511 AMPD2,GSTM4,GSTM2,GNAT2,MIR197
SE_02_131600668 chr1:109614682-109621906 Sample_02_1316 Brain hMGLs_TREM2-R47H 668 2 139 12 1 92 511 AMPD2,GSTM4,GSTM2,GNAT2,MIR197
SE_02_120000783 chr1:109615149-109644052 Sample_02_1200 Brain GBM36 783 6 712 74 0 237 2223 AMPD2,GSTM1,GSTM2,GSTM4,MIR197,GNAT2
SE_02_151900380 chr1:109615227-109630373 Sample_02_1519 Umbilical vein HUVEC_Scr_IL1beta 380 4 350 34 0 194 1803 AMPD2,GSTM4,GSTM2,GNAT2,MIR197
SE_02_103400775 chr1:109615233-109625260 Sample_02_1034 Blood AML cell 775 2 202 17 0 99 672 AMPD2,GSTM4,GSTM2,GNAT2,MIR197
SE_02_061700428 chr1:109615290-109630924 Sample_02_0617 HSPC FL CD34+CD38-/lowCD90+ HSPC 428 2 363 34 0 201 1951 AMPD2,GSTM4,GSTM2,GNAT2,MIR197
SE_02_085701308 chr1:109615489-109633752 Sample_02_0857 Glioblastoma Glioblastoma neurosphere cell_HF-3035 1308 2 440 41 0 223 2223 AMPD2,GSTM4,GSTM2,GNAT2,MIR197
SE_02_097200376 chr1:109615798-109650229 Sample_02_0972 Brain H3.3K27M-KO_BT245-D2p8-Rx_R1_cells 376 10 817 86 0 249 2223 AMPD2,GSTM1,GSTM2,GSTM4,MIR197,GNAT2
SE_02_105900453 chr1:109615901-109659462 Sample_02_1059 Bone A673_WT 453 10 1090 126 0 278 2771 AMPD2,GSTM4,GSTM1,GSTM2,MIR197,GNAT2
SE_02_147300455 chr1:109615901-109659462 Sample_02_1473 Bone A-673 455 10 1090 126 0 278 2771 AMPD2,GSTM4,GSTM1,GSTM2,MIR197,GNAT2
SE_02_110700495 chr1:109615910-109649823 Sample_02_1107 Brain SK-N-AS 495 17 804 83 0 246 2223 AMPD2,GSTM1,GSTM2,GSTM4,MIR197,GNAT2
SE_02_145100563 chr1:109615953-109622169 Sample_02_1451 Arter pulmonary arterial smooth muscle cells_PAH1_sictrl 563 2 118 11 0 91 511 AMPD2,GSTM4,GSTM2,GNAT2,MIR197
SE_02_145200653 chr1:109616200-109622071 Sample_02_1452 Arter pulmonary arterial smooth muscle cells_PAH2_sictrl 653 1 111 11 0 91 511 AMPD2,GSTM4,GSTM2,GNAT2,MIR197
SE_02_122400965 chr1:109616272-109640153 Sample_02_1224 Bone marrow normal plasma cell 965 9 602 66 0 237 2223 AMPD2,GSTM1,GSTM2,GSTM4,MIR197,GNAT2
SE_02_037300459 chr1:109616347-109633182 Sample_02_0373 Skeletal muscle RMS206 459 3 412 39 0 223 2223 AMPD2,GSTM2,GSTM4,GNAT2,MIR197
SE_02_155900609 chr1:109616384-109644101 Sample_02_1559 Gastrointestinal Stromal GIST-8_PDGFRA e18 609 6 689 73 0 237 2223 AMPD2,GSTM1,GSTM2,GSTM4,MIR197,GNAT2
SE_02_110800163 chr1:109616421-109649370 Sample_02_1108 Brain SK-N-BE_2_-C 163 10 792 83 0 244 2223 AMPD2,GSTM1,GSTM2,GSTM4,MIR197,GNAT2
SE_02_145400727 chr1:109616531-109622332 Sample_02_1454 Arter pulmonary arterial smooth muscle cells_PAH1_sialdh1a3 727 1 114 11 0 89 511 AMPD2,GSTM4,GSTM2,GNAT2,MIR197
SE_02_030400339 chr1:109616572-109644505 Sample_02_0304 Neuroblastoma N206 339 5 704 77 0 235 2223 AMPD2,GSTM1,GSTM2,GNAT2,GSTM4,MIR197
SE_02_034100281 chr1:109616651-109650216 Sample_02_0341 Autonomic ganglia SH-SY5Y_untreat 281 5 805 86 0 246 2223 AMPD2,GSTM1,GSTM2,GNAT2,GSTM4,MIR197
SE_02_031200424 chr1:109616660-109650478 Sample_02_0312 Neuroblastoma SK-N-BE_2-C 424 4 808 87 0 248 2223 AMPD2,GSTM1,GSTM2,GNAT2,GSTM4,MIR197
SE_02_042100400 chr1:109616693-109649839 Sample_02_0421 Brain BE2C_3 400 7 797 83 0 244 2223 AMPD2,GSTM1,GSTM2,GNAT2,GSTM4,MIR197
SE_02_105000298 chr1:109616713-109622849 Sample_02_1050 Highly metastatic osteosarcoma MG63-3_DMSO 298 2 127 13 0 90 511 AMPD2,GSTM4,GSTM2,GNAT2,MIR197
SE_02_110000235 chr1:109616822-109644784 Sample_02_1100 Brain COG-N-415 235 10 703 77 0 233 2223 AMPD2,GSTM1,GSTM2,GSTM4,MIR197,GNAT2
SE_02_110400108 chr1:109616833-109649715 Sample_02_1104 Brain NB-69 108 9 787 82 0 242 2223 AMPD2,GSTM1,GSTM2,GSTM4,MIR197,GNAT2
SE_02_142700957 chr1:109616839-109621928 Sample_02_1427 Shoulder fibroblast_343 957 2 97 9 0 87 511 AMPD2,GSTM4,GSTM2,GNAT2,MIR197
SE_02_132201311 chr1:109616919-109630605 Sample_02_1322 Connective Tissue HT1080_WT 1311 3 327 33 0 194 1884 AMPD2,GSTM4,GSTM2,GNAT2,MIR197
SE_02_031500171 chr1:109617001-109649985 Sample_02_0315 Neuroblastoma TR14 171 7 789 82 0 242 2223 AMPD2,GSTM1,GSTM2,GNAT2,GSTM4,MIR197
SE_02_108000524 chr1:109617026-109633285 Sample_02_1080 Muscle JR1 shCtrl 524 4 399 38 0 219 2223 AMPD2,GSTM4,GSTM2,GNAT2,MIR197
SE_02_110500694 chr1:109617120-109643950 Sample_02_1105 Brain NBL-S 694 10 674 72 0 233 2223 AMPD2,GSTM1,GSTM2,GSTM4,MIR197,GNAT2
SE_02_155300400 chr1:109617239-109644234 Sample_02_1553 Gastrointestinal Stromal GIST-2_KIT e11 400 11 682 72 0 233 2223 AMPD2,GSTM1,GSTM2,GSTM4,MIR197,GNAT2
SE_02_030600419 chr1:109618311-109650166 Sample_02_0306 Autonomic ganglia SH-SY5Y 419 4 769 82 0 237 2223 AMPD2,GSTM1,GSTM2,GNAT2,GSTM4,MIR197
SE_02_003200351 chr1:109618438-109644439 Sample_02_0032 Pancreas pancreatic-islets-M 351 3 661 71 0 226 2223 AMPD2,GSTM1,GSTM2,GNAT2,GSTM4,MIR197
SE_02_025300503 chr1:109618444-109649751 Sample_02_0253 Brain BE2C_DMSO 503 6 756 79 0 235 2223 AMPD2,GSTM1,GSTM2,GNAT2,GSTM4,MIR197
SE_02_025100297 chr1:109618505-109649919 Sample_02_0251 Autonomic ganglia SH-SY5Y-MYCN-OFF 297 7 758 79 0 235 2223 AMPD2,GSTM1,GSTM2,GNAT2,GSTM4,MIR197
SE_02_128000791 chr1:109618595-109664999 Sample_02_1280 Bone Mesenchymal stem cells_SPC_mutation_ EF1 791 11 1222 135 0 269 2958 AMPD2,GSTM4,GSTM1,GSTM2,GSTM5,MIR197,GNAT2
SE_02_036900293 chr1:109618602-109637316 Sample_02_0369 Skeletal muscle RD 293 3 471 50 0 223 2223 AMPD2,GSTM2,GSTM4,GNAT2,MIR197
SE_02_037900293 chr1:109618602-109637316 Sample_02_0379 Skeletal muscle RD-Fusion-Negative-Rhabdomyosarcoma 293 3 471 50 0 223 2223 AMPD2,GSTM2,GSTM4,GNAT2,MIR197
SE_02_143301280 chr1:109618649-109625974 Sample_02_1433 Bone A673 STAG2 null 1280 1 150 13 0 102 846 AMPD2,GSTM4,GSTM2,GNAT2,MIR197
SE_02_143201742 chr1:109618778-109625382 Sample_02_1432 Bone A673 STAG2 WT 1742 1 140 13 0 92 706 AMPD2,GSTM4,GSTM2,GNAT2,MIR197
SE_02_065900528 chr1:109618795-109626617 Sample_02_0659 Lung H23 528 1 167 16 0 104 983 AMPD2,GSTM4,GSTM2,GNAT2,MIR197
SE_02_110300200 chr1:109619020-109649726 Sample_02_1103 Brain NB-1643 200 11 748 79 0 235 2223 AMPD2,GSTM1,GSTM2,GSTM4,MIR197,GNAT2
SE_01_009200689 chr1:109619037-109650083 Sample_01_0092 Vagina vagina 689 6 755 79 0 236 2223 AMPD2,GSTM1,GSTM2,GNAT2,GSTM4,MIR197
SE_02_039601947 chr1:109619195-109644306 Sample_02_0396 Skin NHEK-D 1947 5 649 69 0 226 2223 AMPD2,GSTM1,GSTM2,GNAT2,GSTM4,MIR197
SE_02_108200678 chr1:109619266-109640830 Sample_02_1082 Retina retina 678 8 570 65 0 226 2223 AMPD2,GSTM1,GSTM2,GSTM4,MIR197,GNAT2
SE_02_104701883 chr1:109626039-109644273 Sample_02_1047 Peripheral blood CD4+ cells_CTCL1181 1883 11 501 56 0 124 1370 AMPD2,GSTM1,GSTM2,GSTM4,MIR197,GNAT2
SE_02_082700637 chr1:109627361-109650517 Sample_02_0827 Stomach normal gastric 637 5 575 66 0 120 1059 AMPD2,GSTM1,GSTM2,GSTM4,MIR197,GNAT2
SE_02_104602579 chr1:109627806-109648874 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 2579 12 531 60 0 108 963 AMPD2,GSTM1,GSTM2,GSTM4,MIR197,GNAT2
SE_02_123500447 chr1:109630965-109649423 Sample_02_1235 Brain Neuroblastoma PDX tumour cells 447 9 450 49 0 44 254 AMPD2,GSTM1,GSTM2,GSTM4,MIR197,GNAT2
SE_02_150000542 chr1:109631366-109649459 Sample_02_1500 Brain KELLY_untreat 542 6 437 47 0 37 182 AMPD2,GSTM1,GSTM2,GSTM4,MIR197,GNAT2
SE_02_148100236 chr1:109631785-109663733 Sample_02_1481 Bone MIC 236 11 867 99 0 61 799 AMPD2,GSTM4,GSTM1,GSTM2,GSTM5,MIR197,GNAT2
Genomic distribution of SEs associated with AMPD2
Genome Browser

The strength of the tissue affected by the gene

Expression of AMPD2

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)