SEdb 2.0
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Gene overview

Strategies/Algorithm: lasso Ensembl ID: ENSG00000106400
Gene: ZNHIT1 Gene type: protein_coding
Strand: + External links:
Genomic region: chr7:101218165-101224190 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_093000033 chr7:101080654-101141121 Sample_02_0930 Mid-gestation placenta trophoblast__SynT 33 38 1820 223 9 92 2620 TRIM56,SERPINE1,MIR4653,VGF,AP1S1,NAT16,ZNHIT1
SE_02_094900039 chr7:101084929-101141084 Sample_02_0949 Umbilical artery HUAEC_WT 39 34 1707 207 9 92 2620 TRIM56,SERPINE1,MIR4653,VGF,AP1S1,NAT16,PLOD3,MOGAT3,ZNHIT1
SE_02_144700052 chr7:101089745-101141001 Sample_02_1447 Adipose SW872_CAMTA1 52 13 1565 194 9 92 1774 TRIM56,SERPINE1,MIR4653,VGF,AP1S1,NAT16,ZNHIT1
SE_02_144900044 chr7:101090818-101141136 Sample_02_1449 Adipose SW872_YAP_TFE3 44 8 1538 189 9 92 1617 TRIM56,SERPINE1,MIR4653,VGF,AP1S1,NAT16,ZNHIT1
SE_02_092900088 chr7:101093550-101140148 Sample_02_0929 Mid-gestation placenta trophoblast__CytT 88 39 1429 172 9 92 1538 SERPINE1,MIR4653,VGF,AP1S1,NAT16,TRIM56,ZNHIT1
SE_02_130900068 chr7:101094050-101140149 Sample_02_1309 Artery Pulmonary artery endothelial cells_Control 68 12 1414 169 9 92 1538 SERPINE1,MIR4653,VGF,AP1S1,NAT16,TRIM56,PLOD3,ZNHIT1
SE_02_144400045 chr7:101096779-101141914 Sample_02_1444 Adipose SW872_Empty Vector 45 12 1384 164 8 95 1538 SERPINE1,MIR4653,VGF,AP1S1,NAT16,TRIM56,ZNHIT1
SE_02_144600076 chr7:101098356-101125339 Sample_02_1446 Adipose SW872_TAZ_CAMTA1 76 9 826 108 2 18 0 SERPINE1,AP1S1,TRIM56,VGF,MIR4653,ZNHIT1
SE_02_130800349 chr7:101099448-101139523 Sample_02_1308 Artery Pulmonary artery endothelial cells_caMEK5 349 11 1251 145 7 92 1538 SERPINE1,MIR4653,VGF,AP1S1,NAT16,TRIM56,PLOD3,ZNHIT1
SE_02_144800175 chr7:101099504-101140987 Sample_02_1448 Adipose SW872_YAP5SA 175 6 1285 148 7 92 1538 SERPINE1,MIR4653,VGF,AP1S1,NAT16,TRIM56,ZNHIT1
SE_02_062000010 chr7:101099514-101138870 Sample_02_0620 Aortic Aortic Endothelial Cells_DF 10 21 1226 142 6 86 1474 SERPINE1,MIR4653,VGF,AP1S1,NAT16,TRIM56,PLOD3,ZNHIT1
SE_02_062100003 chr7:101108886-101126206 Sample_02_0621 Aortic Aortic Endothelial Cells_UF 3 9 510 73 1 18 0 SERPINE1,AP1S1,TRIM56,VGF,MIR4653,PLOD3,ZNHIT1
SE_04_000100832 chr7:101231566-101268765 Sample_04_0001 Blood heat shocked K562 832 7 1110 200 1 99 1981 CLDN15,FIS1,PLOD3,LOC101927746,ZNHIT1,MOGAT3,RABL5
Genomic distribution of SEs associated with ZNHIT1
Genome Browser

The strength of the tissue affected by the gene

Expression of ZNHIT1

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)