SEdb 2.0
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Gene overview

Strategies/Algorithm: lasso Ensembl ID: ENSG00000143222
Gene: UFC1 Gene type: protein_coding
Strand: + External links:
Genomic region: chr1:161152776-161158856 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_153000747 chr1:160997230-161025732 Sample_02_1530 Peripheral blood neutrophils_0BA0X 747 6 747 94 0 63 944 F11R,ARHGAP30,TSTD1,USF1,ITLN2,UFC1
SE_00_004900642 chr1:160997616-161019401 Sample_00_0049 Small intestine small intestine 30y 642 9 577 75 0 46 646 F11R,TSTD1,USF1,ITLN2,DEDD,PCP4L1,NIT1,ARHGAP30,LY9,NDUFS2,NR1I3,PFDN2,UFC1,ITLN1,PVRL4
SE_02_152900876 chr1:161011094-161022093 Sample_02_1529 Peripheral blood neutrophils_0BC75 876 1 269 29 0 31 169 F11R,TSTD1,USF1,ARHGAP30,UFC1
SE_02_062000415 chr1:161011925-161021122 Sample_02_0620 Aortic Aortic Endothelial Cells_DF 415 6 218 23 0 25 57 F11R,TSTD1,USF1,ARHGAP30,DEDD,PFDN2,UFC1
SE_02_130800232 chr1:161011937-161021605 Sample_02_1308 Artery Pulmonary artery endothelial cells_caMEK5 232 1 229 23 0 29 155 F11R,TSTD1,USF1,ARHGAP30,DEDD,NDUFS2,NIT1,PFDN2,USP21,UFC1,KLHDC9
SE_02_130900363 chr1:161012049-161021568 Sample_02_1309 Artery Pulmonary artery endothelial cells_Control 363 4 223 23 0 29 153 F11R,TSTD1,USF1,ARHGAP30,DEDD,NDUFS2,NIT1,PFDN2,USP21,UFC1,KLHDC9
SE_02_062000100 chr1:161182078-161207292 Sample_02_0620 Aortic Aortic Endothelial Cells_DF 100 4 630 42 3 198 1819 NDUFS2,ADAMTS4,FCER1G,DEDD,MIR5187,TOMM40L,PPOX,USP21,UFC1,APOA2,NR1I3,B4GALT3,SDHC
SE_02_120400553 chr1:161184781-161203141 Sample_02_1204 Brain NB2 553 6 454 33 3 173 1634 NDUFS2,ADAMTS4,FCER1G,B4GALT3,MIR5187,TOMM40L,NR1I3,PPOX,USP21,UFC1,APOA2,CFAP126,DEDD,PCP4L1,ARHGAP30,PFDN2,KLHDC9
SE_02_120500546 chr1:161185472-161209830 Sample_02_1205 Brain NB3 546 11 622 41 4 200 1956 NDUFS2,ADAMTS4,FCER1G,B4GALT3,MIR5187,PPOX,TOMM40L,PCP4L1,USP21,UFC1,APOA2,NR1I3,CFAP126,DEDD,ARHGAP30,PFDN2,KLHDC9
SE_02_112800491 chr1:161185732-161206899 Sample_02_1128 Adipose visceral adipose_CTL_HCTR10 491 4 536 35 3 185 1819 NDUFS2,ADAMTS4,FCER1G,B4GALT3,MIR5187,TOMM40L,NR1I3,PPOX,USP21,UFC1,APOA2,MPZ,DEDD,PCP4L1,SDHC
SE_02_046500643 chr1:161192648-161203139 Sample_02_0465 Adipose subcutaneous adipocytes 643 1 267 17 2 123 1163 NDUFS2,ADAMTS4,FCER1G,B4GALT3,MIR5187,TOMM40L,NR1I3,PPOX,USP21,UFC1,APOA2,MPZ,DEDD,PCP4L1,SDHC
SE_01_011500965 chr1:161196524-161203145 Sample_01_0115 Skeletal Muscle myotube originated from skeletal muscle myoblast 965 1 170 15 2 86 635 NDUFS2,ADAMTS4,FCER1G,B4GALT3,MIR5187,TOMM40L,NR1I3,PPOX,USP21,UFC1,APOA2,DEDD,PCP4L1,NIT1,SDHC,KLHDC9
SE_02_089500448 chr1:161197053-161208244 Sample_02_0895 Heart left ventricle_LV1259 448 5 292 19 2 102 709 NDUFS2,ADAMTS4,FCER1G,B4GALT3,MIR5187,TOMM40L,NR1I3,PPOX,USP21,UFC1,APOA2,PCP4L1,PFDN2,KLHDC9
SE_00_005200811 chr1:161199165-161217920 Sample_00_0052 Heart left ventricle 3y 811 4 504 38 4 109 1147 FCER1G,NDUFS2,B4GALT3,MIR5187,PPOX,TOMM40L,PCP4L1,USP21,UFC1,APOA2,NR1I3,ADAMTS4,PFDN2,KLHDC9
SE_02_071600579 chr1:161381724-161402943 Sample_02_0716 Pancreas SUIT2_GFP 579 6 520 76 1 0 94 CFAP126,NIT1,ADAMTS4,USP21,UFC1
SE_02_071900498 chr1:161381775-161401069 Sample_02_0719 Pancreas SUIT2_TP63dN_DOX 498 5 470 65 1 0 94 CFAP126,NIT1,ADAMTS4,USP21,UFC1
SE_02_068300416 chr1:161389100-161400557 Sample_02_0683 Lung DMS114 416 3 281 33 1 0 94 CFAP126,NDUFS2,NIT1,USF1,USP21,UFC1
Genomic distribution of SEs associated with UFC1
Genome Browser

The strength of the tissue affected by the gene

Expression of UFC1

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)