Gene overview
| Strategies/Algorithm: | lasso | Ensembl ID: | ENSG00000168016 |
| Gene: | TRANK1 | Gene type: | protein_coding |
| Strand: | - | External links: |
|
| Genomic region: | chr3:36826819-36945057 | Genome Browser: |   |
Super-enhancer search result of gene-based
| SE ID | SE Region | Sample ID | Tissue type | Biosample name | SE rank | Element | Common SNP | eQTL | Risk SNP | TFBS | CRISPR Cas9 | Gene |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SE_02_073900449 | chr3:36875102-36934043 |
Sample_02_0739 | Blood | Nalm6 | 449 | 18 | 1473 | 143 | 12 | 74 | 354 | TRANK1,MLH1 |
| SE_02_088500333 | chr3:36875489-36925239 |
Sample_02_0885 | Blood | NALM6_2 | 333 | 9 | 1246 | 130 | 12 | 60 | 354 | TRANK1,MLH1 |
| SE_02_057300313 | chr3:36876015-36925297 |
Sample_02_0573 | Blood | Nalm6_1 | 313 | 15 | 1235 | 128 | 12 | 60 | 354 | TRANK1,MLH1 |
| SE_02_121800171 | chr3:36890253-36927621 |
Sample_02_1218 | Bone marrow | Daudi | 171 | 29 | 968 | 85 | 9 | 55 | 279 | TRANK1,MLH1,EPM2AIP1 |
| SE_02_109900085 | chr3:36892577-36991521 |
Sample_02_1099 | Haematopoietic and lymphoid tissue bone marrow | K562_DMSO_noIFNG | 85 | 36 | 2517 | 234 | 9 | 103 | 862 | TRANK1,EPM2AIP1,MLH1 |
| SE_02_098800290 | chr3:36901201-36941520 |
Sample_02_0988 | Blood | K562_EPZ | 290 | 11 | 1044 | 79 | 6 | 32 | 84 | TRANK1,MLH1,EPM2AIP1 |
| SE_04_000100375 | chr3:36905152-36974971 |
Sample_04_0001 | Blood | heat shocked K562 | 375 | 9 | 1746 | 163 | 6 | 40 | 168 | TRANK1,MLH1,EPM2AIP1 |
| SE_02_122900810 | chr3:36905790-36943196 |
Sample_02_1229 | Haematopoietic and lymphoid tissue bone marrow | K562_Control | 810 | 26 | 956 | 73 | 6 | 32 | 0 | TRANK1,MLH1,EPM2AIP1 |
| SE_02_098700227 | chr3:36906792-36942293 |
Sample_02_0987 | Blood | K562_Control_1 | 227 | 10 | 918 | 72 | 6 | 32 | 0 | TRANK1,MLH1,EPM2AIP1 |
| SE_02_054600409 | chr3:36907728-36933525 |
Sample_02_0546 | Bone marrow | K562_MYO1D Non-hub KO | 409 | 6 | 653 | 51 | 6 | 29 | 0 | TRANK1,MLH1,EPM2AIP1 |
| SE_04_000200913 | chr3:36941062-36974214 |
Sample_04_0002 | Blood | cold shocked K562 | 913 | 3 | 798 | 88 | 0 | 11 | 168 | TRANK1,MLH1,EPM2AIP1 |
Genomic distribution of SEs associated with TRANK1