SEdb 2.0
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Gene overview

Strategies/Algorithm: lasso Ensembl ID: ENSG00000167619
Gene: TMEM145 Gene type: protein_coding
Strand: + External links:
Genomic region: chr19:42313309-42325064 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_120400042 chr19:42242785-42287024 Sample_02_1204 Brain NB2 42 6 1026 68 2 962 1480 CIC,ERF,DEDD2,GSK3A,ZNF526,PRR19,PAFAH1B3,MEGF8,TMEM145,POU2F2
SE_02_113800226 chr19:42243111-42283832 Sample_02_1138 Retinal Pigmented Epithelial RPE1-prometaphase 226 8 958 62 1 834 1217 CIC,ERF,DEDD2,GSK3A,ZNF526,PRR19,PAFAH1B3,MEGF8,TMEM145,POU2F2
SE_04_000600055 chr19:42243352-42282551 Sample_04_0006 Lung A549 GFP control 55 4 921 59 1 820 1217 CIC,ERF,DEDD2,GSK3A,ZNF526,PRR19,PAFAH1B3,MEGF8,TMEM145,POU2F2
SE_02_120300084 chr19:42243446-42283893 Sample_02_1203 Brain NB1 84 11 946 61 1 837 1217 CIC,ERF,DEDD2,GSK3A,ZNF526,PRR19,PAFAH1B3,MEGF8,TMEM145,POU2F2,GRIK5
SE_02_093100088 chr19:42244121-42286538 Sample_02_0931 Embryo H9 UTXKO 88 7 976 64 1 943 1373 CIC,ERF,DEDD2,GSK3A,ZNF526,PRR19,PAFAH1B3,MEGF8,TMEM145,POU2F2,CNFN,AC006486.1
SE_01_010500347 chr19:42244200-42287222 Sample_01_0105 Thyroid gland thyroid gland_54y 347 7 994 64 1 961 1542 CIC,ERF,DEDD2,GSK3A,ZNF526,PRR19,PAFAH1B3,MEGF8,TMEM145,GRIK5,ARHGEF1,LIPE
SE_02_113200755 chr19:42258378-42283797 Sample_02_1132 Pancreas KLM1 wt 755 5 600 38 1 387 103 CIC,DEDD2,GSK3A,ZNF526,PRR19,PAFAH1B3,ERF,MEGF8,TMEM145,CXCL17
SE_02_152900471 chr19:42265853-42298202 Sample_02_1529 Peripheral blood neutrophils_0BC75 471 13 801 37 1 793 2556 PAFAH1B3,CIC,DEDD2,GSK3A,ZNF526,PRR19,ERF,MEGF8,TMEM145
SE_02_153000983 chr19:42266824-42277040 Sample_02_1530 Peripheral blood neutrophils_0BA0X 983 1 209 12 1 239 103 CIC,DEDD2,GSK3A,ZNF526,PRR19,PAFAH1B3,ERF,MEGF8,TMEM145
SE_02_073900727 chr19:42267287-42291126 Sample_02_0739 Blood Nalm6 727 7 524 26 1 606 1216 CIC,DEDD2,GSK3A,ZNF526,PRR19,PAFAH1B3,ERF,MEGF8,TMEM145,POU2F2,ZNF574
SE_04_000900610 chr19:42267728-42272349 Sample_04_0009 Lung A549 610 1 90 3 0 103 31 CIC,DEDD2,GSK3A,ZNF526,PRR19,PAFAH1B3,TMEM145,ERF,POU2F2,MEGF8
SE_02_093500076 chr19:42269097-42291634 Sample_02_0935 Retinal Pigmented Epithelial RPE188_Con 76 11 508 28 1 605 1364 CIC,PAFAH1B3,GSK3A,ZNF526,PRR19,ERF,MEGF8,DEDD2,TMEM145
SE_00_005500347 chr19:42269139-42286962 Sample_00_0055 Spleen spleen 34y 347 5 353 24 1 459 354 CIC,PAFAH1B3,GSK3A,ZNF526,PRR19,ERF,MEGF8,DEDD2,TMEM145,POU2F2
SE_02_059100132 chr19:42269148-42285596 Sample_02_0591 PBMCs adult CD4+CD25-CD45RA+CD27+ naive T cells 132 3 320 22 1 435 259 CIC,PAFAH1B3,GSK3A,ZNF526,PRR19,ERF,MEGF8,DEDD2,TMEM145
SE_02_059300163 chr19:42269155-42285061 Sample_02_0593 Fetal spleenocytes fetal naive T cells 163 3 309 22 1 435 259 CIC,PAFAH1B3,GSK3A,ZNF526,PRR19,ERF,MEGF8,DEDD2,TMEM145,POU2F2
SE_02_093700266 chr19:42269195-42287193 Sample_02_0937 Retinal Pigmented Epithelial RPE190_Con 266 6 361 24 1 464 417 CIC,PAFAH1B3,GSK3A,ZNF526,PRR19,ERF,MEGF8,DEDD2,TMEM145
SE_02_095000489 chr19:42269210-42287171 Sample_02_0950 Umbilical vein HUVEC_WT 489 6 360 24 1 462 408 CIC,PAFAH1B3,GSK3A,ZNF526,PRR19,ERF,MEGF8,DEDD2,TMEM145,POU2F2
SE_02_048000206 chr19:42269213-42292166 Sample_02_0480 Gingival epithelial HGEP 206 8 529 28 1 609 1473 CIC,PAFAH1B3,GSK3A,ZNF526,PRR19,ERF,MEGF8,DEDD2,TMEM145,CEACAM1,POU2F2,RABAC1,ZNF574
SE_02_132000291 chr19:42269215-42283828 Sample_02_1320 Connective Tissue HT1080_EWS-FLI1 291 2 298 20 1 334 103 CIC,PAFAH1B3,GSK3A,ZNF526,PRR19,ERF,MEGF8,DEDD2,TMEM145,POU2F2,ZNF574
SE_02_121800356 chr19:42269219-42286967 Sample_02_1218 Bone marrow Daudi 356 5 351 24 1 456 355 CIC,PAFAH1B3,GSK3A,ZNF526,PRR19,ERF,MEGF8,DEDD2,TMEM145
SE_02_083200564 chr19:42269239-42287117 Sample_02_0832 Umblical vein HUVECs_TNF30min 564 6 357 24 1 460 388 CIC,PAFAH1B3,GSK3A,ZNF526,PRR19,ERF,MEGF8,DEDD2,TMEM145,POU2F2
SE_02_132100363 chr19:42269241-42283844 Sample_02_1321 Connective Tissue HT1080_FUS-DDIT3 363 3 298 20 1 333 103 CIC,PAFAH1B3,GSK3A,ZNF526,PRR19,ERF,MEGF8,DEDD2,TMEM145,POU2F2,ZNF574
SE_02_060601109 chr19:42269249-42283234 Sample_02_0606 Skin Skin Fibroblast_Nutlin3A 1109 3 285 18 1 326 103 CIC,PAFAH1B3,GSK3A,ZNF526,PRR19,ERF,MEGF8,DEDD2,TMEM145,RABAC1
SE_02_062000810 chr19:42269282-42282445 Sample_02_0620 Aortic Aortic Endothelial Cells_DF 810 4 271 18 1 323 103 CIC,PAFAH1B3,GSK3A,ZNF526,PRR19,ERF,MEGF8,DEDD2,TMEM145,GRIK5
SE_02_058500693 chr19:42269285-42287033 Sample_02_0585 Umbilical vein HUVEC 0hour 693 5 353 24 1 455 367 CIC,PAFAH1B3,GSK3A,ZNF526,PRR19,ERF,MEGF8,DEDD2,TMEM145,POU2F2
SE_02_083100175 chr19:42269291-42287020 Sample_02_0831 Umblical vein HUVECs_TNF0min 175 4 353 24 1 455 363 CIC,PAFAH1B3,GSK3A,ZNF526,PRR19,ERF,MEGF8,DEDD2,TMEM145,POU2F2
SE_02_093800827 chr19:42269296-42283841 Sample_02_0938 Retinal Pigmented Epithelial RPE190_TnT 827 5 298 20 1 333 103 CIC,PAFAH1B3,GSK3A,ZNF526,PRR19,ERF,MEGF8,DEDD2,TMEM145
SE_02_123800061 chr19:42269494-42287097 Sample_02_1238 Skin MS1_virus_positive 61 6 350 24 1 455 379 CIC,PAFAH1B3,GSK3A,ZNF526,PRR19,ERF,MEGF8,DEDD2,TMEM145
SE_01_011700725 chr19:42269500-42282652 Sample_01_0117 Lung fibroblast of lung 725 4 275 18 1 320 103 CIC,PAFAH1B3,GSK3A,ZNF526,PRR19,ERF,MEGF8,DEDD2,TMEM145,CEACAM1,ZNF574
SE_00_004600403 chr19:42269506-42287099 Sample_00_0046 Heart right ventricle_34y 403 8 350 24 1 455 380 CIC,PAFAH1B3,GSK3A,ZNF526,PRR19,ERF,MEGF8,DEDD2,TMEM145,POU2F2,ZNF574
SE_02_123600257 chr19:42269514-42282824 Sample_02_1236 Skin MKL1_virus_positive 257 3 276 18 1 321 103 CIC,PAFAH1B3,GSK3A,ZNF526,PRR19,ERF,MEGF8,DEDD2,TMEM145
SE_01_011200371 chr19:42269548-42282782 Sample_01_0112 Embryonic kidney HEK293_encode 371 5 276 18 1 319 103 CIC,PAFAH1B3,GSK3A,ZNF526,PRR19,ERF,MEGF8,DEDD2,TMEM145,CNFN
SE_02_077001369 chr19:42269555-42287311 Sample_02_0770 Ovary OVCA429_shLuc 1369 11 358 24 1 461 446 CIC,PAFAH1B3,GSK3A,ZNF526,PRR19,ERF,MEGF8,DEDD2,TMEM145,ZNF574
SE_02_148600440 chr19:42269569-42283813 Sample_02_1486 Bone SK-N-MC 440 5 294 20 1 328 103 CIC,PAFAH1B3,GSK3A,ZNF526,PRR19,ERF,MEGF8,DEDD2,TMEM145
SE_02_077100850 chr19:42269582-42287244 Sample_02_0771 Ovary OVCA429_shGRHL2 850 7 356 24 1 461 430 CIC,PAFAH1B3,GSK3A,ZNF526,PRR19,ERF,MEGF8,DEDD2,TMEM145,ZNF574
SE_02_151900585 chr19:42269816-42287025 Sample_02_1519 Umbilical vein HUVEC_Scr_IL1beta 585 6 339 23 1 446 366 CIC,PAFAH1B3,GSK3A,ZNF526,PRR19,ERF,MEGF8,DEDD2,TMEM145,POU2F2
SE_02_151800191 chr19:42269831-42287073 Sample_02_1518 Umbilical vein HUVEC_Scr 191 7 337 22 1 448 375 CIC,PAFAH1B3,GSK3A,ZNF526,PRR19,ERF,MEGF8,DEDD2,TMEM145,POU2F2
SE_02_100700260 chr19:42270497-42281534 Sample_02_1007 Brain Lateral temporal lobe_14T_Old 260 5 216 14 1 266 103 CIC,PAFAH1B3,GSK3A,ERF,PRR19,MEGF8,TMEM145,DEDD2,ZNF526
SE_02_152000698 chr19:42270520-42286951 Sample_02_1520 Umbilical vein HUVEC_Notch1kd_IL1beta 698 6 322 22 1 439 349 CIC,PAFAH1B3,GSK3A,ERF,PRR19,MEGF8,TMEM145,DEDD2,ZNF526
SE_00_005700338 chr19:42270523-42286982 Sample_00_0057 Heart right ventricle 3y 338 7 323 22 1 439 357 CIC,PAFAH1B3,GSK3A,ERF,PRR19,MEGF8,TMEM145,POU2F2,DEDD2,ZNF574,ZNF526
SE_02_100600210 chr19:42270937-42281876 Sample_02_1006 Brain Lateral temporal lobe_13T_Old 210 8 218 15 1 280 103 CIC,PAFAH1B3,GSK3A,ERF,PRR19,MEGF8,TMEM145,DEDD2,ZNF526
SE_02_087500845 chr19:42273238-42289094 Sample_02_0875 Peripheral blood Peripheral blood-derived mast cells 845 1 338 18 1 413 612 CIC,PAFAH1B3,GSK3A,ERF,PRR19,MEGF8,TMEM145,DEDD2,LIPE,ZNF526
SE_02_100500320 chr19:42275428-42281927 Sample_02_1005 Brain Lateral temporal lobe_11T_Old 320 6 139 11 1 123 0 CIC,PAFAH1B3,GSK3A,ERF,PRR19,MEGF8,TMEM145,DEDD2,ZNF526
SE_01_010700869 chr19:42276377-42285321 Sample_01_0107 Esophagus esophagus squamous epithelium 869 1 171 14 1 248 156 CIC,PAFAH1B3,GSK3A,ERF,PRR19,MEGF8,TMEM145,POU2F2,DEDD2,GRIK5,LIPE,ZNF574,CNFN,ZNF526,CXCL17
SE_02_146900592 chr19:42276378-42287260 Sample_02_1469 Umbilical Vein HUVEC 592 1 219 16 1 283 330 CIC,PAFAH1B3,GSK3A,ERF,PRR19,MEGF8,TMEM145,DEDD2,ZNF526
SE_02_120500962 chr19:42276924-42285617 Sample_02_1205 Brain NB3 962 1 166 13 1 246 156 CIC,PAFAH1B3,GSK3A,ERF,PRR19,MEGF8,TMEM145,POU2F2,DEDD2,ZNF526
SE_02_108200549 chr19:42277283-42287176 Sample_02_1082 Retina retina 549 1 201 14 0 276 307 CIC,PAFAH1B3,GSK3A,ERF,PRR19,MEGF8,TMEM145,DEDD2,ZNF526
SE_02_100300118 chr19:42277312-42282237 Sample_02_1003 Brain Lateral temporal lobe_19T_Young 118 8 105 8 0 139 0 CIC,PAFAH1B3,GSK3A,ERF,PRR19,MEGF8,TMEM145,DEDD2,ZNF526
SE_02_132200279 chr19:42279506-42285215 Sample_02_1322 Connective Tissue HT1080_WT 279 1 104 9 0 218 156 CIC,PAFAH1B3,GSK3A,ERF,PRR19,MEGF8,TMEM145,POU2F2,DEDD2,ZNF574,ZNF526
Genomic distribution of SEs associated with TMEM145
Genome Browser

The strength of the tissue affected by the gene

Expression of TMEM145

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)