SEdb 2.0
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Gene overview

Strategies/Algorithm: lasso Ensembl ID: ENSG00000092850
Gene: TEKT2 Gene type: protein_coding
Strand: + External links:
Genomic region: chr1:36084094-36088275 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_01_011500230 chr1:36135134-36207943 Sample_01_0115 Skeletal Muscle myotube originated from skeletal muscle myoblast 230 16 2053 106 3 431 2407 TRAPPC3,MAP7D1,ADPRHL2,COL8A2,THRAP3,CLSPN,TEKT2,TFAP2E
SE_02_151200160 chr1:36135425-36163340 Sample_02_1512 Lung Purified AT2 cells 160 3 770 52 2 230 812 TRAPPC3,MAP7D1,COL8A2,ADPRHL2,THRAP3,TEKT2,STK40
SE_02_153300163 chr1:36135707-36163361 Sample_02_1533 Lung purified primary alveolar epithelial type 2 cells 163 3 768 52 2 230 812 TRAPPC3,MAP7D1,COL8A2,ADPRHL2,THRAP3,TEKT2,STK40
SE_01_010400138 chr1:36136143-36166117 Sample_01_0104 Lung upper lobe of left lung 138 8 816 51 2 246 812 TRAPPC3,MAP7D1,COL8A2,ADPRHL2,THRAP3,TEKT2,STK40
SE_02_151400306 chr1:36136341-36164739 Sample_02_1514 Lung Differentiated AT1-like cells 306 6 783 50 2 246 812 TRAPPC3,MAP7D1,COL8A2,ADPRHL2,THRAP3,TEKT2,STK40
SE_02_093000245 chr1:36140332-36166257 Sample_02_0930 Mid-gestation placenta trophoblast__SynT 245 13 703 46 2 213 447 TRAPPC3,MAP7D1,COL8A2,THRAP3,TEKT2,SH3D21
SE_02_092900124 chr1:36140475-36162982 Sample_02_0929 Mid-gestation placenta trophoblast__CytT 124 11 636 44 2 190 447 TRAPPC3,MAP7D1,COL8A2,THRAP3,TEKT2,SH3D21
SE_02_142900885 chr1:36143290-36167028 Sample_02_1429 Blood GM12878_WT 885 5 633 39 2 209 447 TRAPPC3,MAP7D1,COL8A2,THRAP3,TEKT2,ADPRHL2,AGO3,SH3D21,EVA1B
SE_00_003100895 chr1:36148449-36162592 Sample_00_0031 Placenta placenta 895 4 387 21 1 186 447 MAP7D1,TRAPPC3,COL8A2,AP7D1,SH3D21,TEKT2,THRAP3
SE_02_151300522 chr1:36149804-36164218 Sample_02_1513 Lung Transitional AT2->1 cells 522 2 368 20 1 199 285 MAP7D1,TRAPPC3,COL8A2,THRAP3,TEKT2,ADPRHL2,STK40
SE_02_113200500 chr1:36369392-36402163 Sample_02_1132 Pancreas KLM1 wt 500 9 903 103 4 112 462 STK40,LSM10,EVA1B,OSCP1,SH3D21,TRAPPC3,TEKT2,MRPS15
Genomic distribution of SEs associated with TEKT2
Genome Browser

The strength of the tissue affected by the gene

Expression of TEKT2

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)