SEdb 2.0
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Gene overview

Strategies/Algorithm: lasso Ensembl ID: ENSG00000143977
Gene: SNRPG Gene type: protein_coding
Strand: - External links:
Genomic region: chr2:70281362-70293740 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_047700316 chr2:70068017-70109695 Sample_02_0477 Colon intestinal epithelial organoids_139a 316 8 1167 98 0 167 800 PCBP1-AS1,PCBP1,LOC100133985,SNRPG
SE_01_011200122 chr2:70104762-70143646 Sample_01_0112 Embryonic kidney HEK293_encode 122 8 1066 112 1 47 273 LOC100133985,PCBP1,PCBP1-AS1,C2ORF42,SNRPG,C2orf42,TIA1,ASPRV1
SE_02_123800163 chr2:70118716-70143610 Sample_02_1238 Skin MS1_virus_positive 163 8 699 84 1 44 273 LOC100133985,PCBP1,PCBP1-AS1,C2ORF42,SNRPG,C2orf42
SE_02_101701158 chr2:70270446-70305974 Sample_02_1017 Embryo H9_Mesendoderm 24h_Hydroxyurea 1158 6 938 92 2 58 1380 PCYOX1,SNRPG,FAM136A,MIR1285-2,TIA1
SE_02_107300085 chr2:70328229-70391789 Sample_02_1073 Keratinocyte keratinocytes stem cell 85 13 1679 157 9 53 0 FAM136A,SNRPG,TGFA
SE_02_048000536 chr2:70328679-70389210 Sample_02_0480 Gingival epithelial HGEP 536 17 1611 151 9 45 0 FAM136A,SNRPG
SE_02_112000106 chr2:70343889-70388900 Sample_02_1120 Neonatal foreskin keratinocytes_CTR 106 13 1211 104 6 32 0 FAM136A,SNRPG
Genomic distribution of SEs associated with SNRPG
Genome Browser

The strength of the tissue affected by the gene

Expression of SNRPG

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)