Gene overview

Strategies/Algorithm: lasso Ensembl ID: ENSG00000185669
Gene: SNAI3 Gene type: protein_coding
Strand: - External links:
Genomic region: chr16:88677688-88686507 Genome Browser:

Super-enhancer search result of gene-based

SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_062200535 chr16:88680570-88706337 Sample_02_0622 Blood EOL1_Naive 535 17 1116 101 2 90 1720 SNAI3-AS1,RNF166,SNAI3,IL17C,CTU2,MIR4722,LOC100289580,CYBA,MVD,LOC339059,CDT1
SE_02_152900386 chr16:88688891-88707885 Sample_02_1529 Peripheral blood neutrophils_0BC75 386 1 884 93 4 57 1393 RNF166,CTU2,MIR4722,SNAI3-AS1,SNAI3,LOC100289580,CYBA,MVD,LOC339059,IL17C,TRAPPC2L
SE_02_153000595 chr16:88689324-88709554 Sample_02_1530 Peripheral blood neutrophils_0BA0X 595 1 967 99 3 57 1393 RNF166,CTU2,MIR4722,SNAI3-AS1,SNAI3,LOC100289580,CYBA,MVD,LOC339059,IL17C,TRAPPC2L
SE_02_153100554 chr16:88691927-88706840 Sample_02_1531 Peripheral blood neutrophils_0B9ZK 554 1 721 72 1 55 1320 RNF166,CTU2,MIR4722,SNAI3-AS1,SNAI3,LOC100289580,CYBA,MVD,LOC339059,IL17C,TRAPPC2L
SE_02_092700477 chr16:88697312-88707000 Sample_02_0927 Peripheral blood neutrophils_US 477 1 489 51 0 52 1133 RNF166,CTU2,MIR4722,SNAI3-AS1,SNAI3,LOC100289580,CYBA,MVD,LOC339059,IL17C,TRAPPC2L
SE_01_010900316 chr16:88745970-88785830 Sample_01_0109 Colon transverse colon_54y 316 17 1900 149 10 89 237 PIEZO1,CDT1,CTU2,LOC339059,RNF166,MIR4722,LOC100289580,APRT,SLC22A31,ACSF3,LOC100129697,MVD,CBFA2T3,SNAI3
SE_02_047800466 chr16:88755848-88794034 Sample_02_0478 Colon normal colon mucosa 466 17 1641 129 10 82 133 PIEZO1,CDT1,CTU2,LOC339059,RNF166,MIR4722,LOC100289580,APRT,SLC22A31,ACSF3,LOC100129697,MVD,CBFA2T3,SNAI3
SE_02_116300090 chr16:88768120-88783253 Sample_02_1163 Embryonic kidney HEK293 no dox 90 8 691 55 8 30 0 PIEZO1,LOC339059,CDT1,APRT,LOC100289580,CTU2,RNF166,ZC3H18,MVD,SNAI3
SE_01_011200285 chr16:88768196-88785921 Sample_01_0112 Embryonic kidney HEK293_encode 285 7 764 63 8 60 133 PIEZO1,LOC339059,CDT1,APRT,LOC100289580,CTU2,RNF166,ZC3H18,MVD,SNAI3
SE_02_111400087 chr16:88769557-88786036 Sample_02_1114 Embryonic kidney HEK293 87 9 700 54 7 56 133 PIEZO1,LOC339059,CDT1,APRT,LOC100289580,CTU2,RNF166,ZC3H18,MVD,SNAI3

Genomic distribution of SEs associated with SNAI3

The strength of the tissue affected by the gene


Expression of SNAI3