SEdb 2.0
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Gene overview

Strategies/Algorithm: lasso Ensembl ID: ENSG00000167703
Gene: SLC43A2 Gene type: protein_coding
Strand: - External links:
Genomic region: chr17:1569268-1628886 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_092900412 chr17:1461983-1491648 Sample_02_0929 Mid-gestation placenta trophoblast__CytT 412 8 1104 71 1 206 3314 MYO1C,PITPNA-AS1,INPP5K,CRK,SLC43A2,PITPNA,YWHAE
SE_02_093000283 chr17:1554892-1631618 Sample_02_0930 Mid-gestation placenta trophoblast__SynT 283 33 2755 156 2 293 2513 PITPNA,SLC43A2,RILP,PITPNA-AS1,INPP5K,SCARF1,SERPINF2,TLCD2,MYO1C
SE_02_092900309 chr17:1555237-1626301 Sample_02_0929 Mid-gestation placenta trophoblast__CytT 309 25 2584 151 2 231 2147 PITPNA,SLC43A2,RILP,PITPNA-AS1,INPP5K,SCARF1,SERPINF2,TLCD2,MYO1C
SE_00_003101116 chr17:1568880-1578860 Sample_00_0031 Placenta placenta 1116 1 310 15 0 33 652 SLC43A2,PITPNA,INPP5K,YO1C,RILP,SCARF1,SERPINF2,TLCD2
SE_00_003100818 chr17:1710022-1731368 Sample_00_0031 Placenta placenta 818 4 651 36 5 346 2282 WDR81,TLCD2,MIR22,C17ORF91,PRPF8,SERPINF2,SERPINF1,RILP,SCARF1,SLC43A2,SYD4
SE_02_093001171 chr17:1714095-1737832 Sample_02_0930 Mid-gestation placenta trophoblast__SynT 1171 9 798 60 7 409 2508 WDR81,MIR22HG,TLCD2,SERPINF2,PRPF8,MIR22,SERPINF1,SCARF1,SLC43A2,RILP,SMYD4
Genomic distribution of SEs associated with SLC43A2
Genome Browser

The strength of the tissue affected by the gene

Expression of SLC43A2

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)